prot_P-fluviatile_contig52.11621.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig52.11621.1
Unique Nameprot_P-fluviatile_contig52.11621.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length103
Homology
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BLAST of mRNA_P-fluviatile_contig52.11621.1 vs. uniprot
Match: D8LS33_ECTSI (Conserved Cys-containing small protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS33_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 6.170e-26
Identity = 52/88 (59.09%), Postives = 69/88 (78.41%), Query Frame = 0 
Query:    8 VSSHEFCAAGVLLGLPLSIHKKSYWPVTMAAAAGTAADYREGSANCRREREALMAFRSRK----AEKQNAPPVASSEHPVRAIPQEAW 91
            +S +++CAAGVLLGLPLS+HKKSYWPVT+AA AGTAAD++EG+A+CR +REALMAF +RK    A+ Q      ++E+P +  PQE W
Sbjct:   20 LSHYKYCAAGVLLGLPLSVHKKSYWPVTLAAVAGTAADFKEGTADCRPQREALMAFIARKNAGQAKAQQEASAGTTENPGQHSPQEGW 107
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BLAST of mRNA_P-fluviatile_contig52.11621.1 vs. uniprot
Match: A0A2D4BKQ2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKQ2_PYTIN)

HSP 1 Score: 47.8 bits (112), Expect = 8.950e-5
Identity = 26/63 (41.27%), Postives = 36/63 (57.14%), Query Frame = 0 
Query:   14 CAAGVLLGLPLSIHKKSYWPVTMAAAAGTAADYREGSAN-CRREREALMAFRSRKAEKQNAPP 75
            C AGVL+G+P+S+H+KSY P  M    G+  DY     N CR    AL     ++ ++ NAPP
Sbjct:   37 CVAGVLIGIPISVHRKSYKPFAMLGVLGSFIDYSIPYTNDCRMIHNALQLALQQERQQSNAPP 99
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig52.11621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS33_ECTSI6.170e-2659.09Conserved Cys-containing small protein n=1 Tax=Ect... [more]
A0A2D4BKQ2_PYTIN8.950e-541.27Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig52contigP-fluviatile_contig52:913333..913884 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig52.11621.1mRNA_P-fluviatile_contig52.11621.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig52 912663..914272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig52.11621.1 ID=prot_P-fluviatile_contig52.11621.1|Name=mRNA_P-fluviatile_contig52.11621.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=103bp
MYDTPFFVSSHEFCAAGVLLGLPLSIHKKSYWPVTMAAAAGTAADYREGS
ANCRREREALMAFRSRKAEKQNAPPVASSEHPVRAIPQEAWQSNEQQGRP
EE*
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