prot_P-fluviatile_contig52.11618.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig52.11618.1
Unique Name	prot_P-fluviatile_contig52.11618.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	92

Homology

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BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Match: A0A6H5L0D6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D6_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 7.220e-32
Identity = 60/92 (65.22%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPKGEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEPSP 92
            T++ I+IP+T+ +AM S Q E+W GA  KE+DNLRK++   LVP+SSVPKGEKIL +KFVF KKLDG FKARLVVGGH Q PGQDYG   +P
Sbjct:  124 TNQAIEIPNTYDKAMSSPQREEWTGACSKEMDNLRKHNAYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAP 215

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BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 4.360e-31
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPKGEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEPSP 92
            T++ IKIP+T+ EAM S Q E+W GA  KE+DNLRK++   LVP+SSVPKGEKIL +KFVF KKLDG FKARLVVGGH Q PGQDYG   +P
Sbjct:  560 TNQAIKIPNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAP 651

[Close]

BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 4.430e-31
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPKGEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEPSP 92
            T++ IKIP+T+ EAM S Q E+W GA  KE+DNLRK++   LVP+SSVPKGEKIL +KFVF KKLDG FKARLVVGGH Q PGQDYG   +P
Sbjct:  335 TNQAIKIPNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAP 426

[Close]

BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 4.480e-31
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPKGEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEPSP 92
            T++ IKIP+T+ EAM S Q E+W GA  KE+DNLRK++   LVP+SSVPKGEKIL +KFVF KKLDG FKARLVVGGH Q PGQDYG   +P
Sbjct:  560 TNQAIKIPNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAP 651

[Close]

BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 4.490e-31
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPKGEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEPSP 92
            T++ IKIP+T+ EAM S Q E+W GA  KE+DNLRK++   LVP+SSVPKGEKIL +KFVF KKLDG FKARLVVGGH Q PGQDYG   +P
Sbjct:  560 TNQAIKIPNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAP 651

[Close]

BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Match: A0A6H5K1N4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N4_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 6.990e-31
Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 0

Query:    1 TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPKGEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEPSP 92
            T++VI+IP+++ EAM S Q E+W GA  KE+DNLRK++   LVP+SSVPKGEKIL +KFVF K LDG FKARLVVGGH Q PGQD G   +P
Sbjct:  105 TNQVIEIPNSYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILATKFVFKKNLDGRFKARLVVGGHRQEPGQDCGRSNAP 196

[Close]

BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Match: A0A6H5KS50_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS50_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.000e-30
Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPKGEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEPSP 92
            T++ IKIP+T+ EAM S Q E+W GA  KE+DNLRK++   LVP+SSVPKGE+IL +KFVF KKLDG FKARLVVGGH Q PGQDYG   +P
Sbjct:  278 TNQAIKIPNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEQILGTKFVFTKKLDGRFKARLVVGGHRQAPGQDYGRSYAP 369

[Close]

BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Match: A0A6H5KTY2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY2_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 2.170e-30
Identity = 61/92 (66.30%), Postives = 72/92 (78.26%), Query Frame = 0

Query:    1 TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPKGEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEPSP 92
            T++ IKIP+T+ EAM S Q E+W GA  KE+DN+RK+D   LVP+SSV KGEKIL +KFVF KKLDG FKARLVVGGH Q PGQDYG   +P
Sbjct:  179 TNQAIKIPNTYDEAMSSPQREEWKGACSKEMDNMRKHDVYNLVPLSSVLKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAP 270

[Close]

BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Match: A0A6H5KMR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR4_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 3.440e-30
Identity = 61/92 (66.30%), Postives = 72/92 (78.26%), Query Frame = 0

Query:    1 TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPKGEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEPSP 92
            T++ IKIP+T+ EAM S Q E+W GA  KE+DNLRK++   LVP+SSVPKGEKIL +KF F KKLDG FKARLVVGGH Q PGQDYG   +P
Sbjct:  296 TNQAIKIPNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFGFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAP 387

[Close]

BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 3.950e-30
Identity = 60/90 (66.67%), Postives = 71/90 (78.89%), Query Frame = 0

Query:    1 TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPKGEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEP 90
            T++ IKIP+T+ EAM S Q E+W GA  KE+DNLRK++   LVP+SSVPKGEKIL +KFVF KKLDG FKARL VGGH Q PGQDY + P
Sbjct:  560 TNQAIKIPNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLAVGGHRQEPGQDYRNAP 649

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig52.11618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L0D6_9PHAE	7.220e-32	65.22	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K500_9PHAE	4.360e-31	67.39	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KE92_9PHAE	4.430e-31	67.39	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JRJ1_9PHAE	4.480e-31	67.39	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KCT3_9PHAE	4.490e-31	67.39	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1N4_9PHAE	6.990e-31	64.13	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KS50_9PHAE	1.000e-30	66.30	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KTY2_9PHAE	2.170e-30	66.30	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KMR4_9PHAE	3.440e-30	66.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JJR8_9PHAE	3.950e-30	66.67	Integrase catalytic domain-containing protein n=11...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 46..92 e-value: 6.5E-7 score: 29.2
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 8..91
None	No IPR available	PANTHER	PTHR11439:SF265		coord: 8..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig52	contig	P-fluviatile_contig52:889137..889412 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig52.11618.1	mRNA_P-fluviatile_contig52.11618.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig52 889137..889412 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig52.11618.1 ID=prot_P-fluviatile_contig52.11618.1|Name=mRNA_P-fluviatile_contig52.11618.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=92bp
TSEVIKIPDTFAEAMESTQSEQWNGAIEKEVDNLRKYDDNTLVPMSSVPK
GEKILTSKFVFNKKLDGCFKARLVVGGHGQTPGQDYGDEPSP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013103	RVT_2
IPR039537	Retrotran_Ty1/copia-like