prot_P-fluviatile_contig52.11541.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig52.11541.1
Unique Nameprot_P-fluviatile_contig52.11541.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length134
Homology
BLAST of mRNA_P-fluviatile_contig52.11541.1 vs. uniprot
Match: A0A6H5K4I7_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I7_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.540e-16
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    1 GIGSRASFTTIIDNHVEEATGAGVRLGGALARGVQYGINNKVIGNRIKNCLNSGVKIMSGPQDTICGNLITPPPGVDEAD 80
            GIGSR   + I  NH+++  GAGVRLGG +  G++YG NN+V GN + +C  S VK+M  PQ  IC N +T P  VDE D
Sbjct:   45 GIGSRGDRSIIRYNHIQDTDGAGVRLGGHIVDGIEYGANNQVYGNTMVDCRASAVKVMVDPQGQICENDVTLPDDVDEDD 124          
BLAST of mRNA_P-fluviatile_contig52.11541.1 vs. uniprot
Match: UPI0019FF4931 (DUF1565 domain-containing protein n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019FF4931)

HSP 1 Score: 70.1 bits (170), Expect = 2.100e-11
Identity = 44/101 (43.56%), Postives = 52/101 (51.49%), Query Frame = 0
Query:    1 GIGSRASFTTIIDNHVEEATGAGVRLGGALARGVQYGINNKVIGNRIKNCLNSGVKIMSGPQDTICGNLITPPPGVDEADYKFSRGTFADDYDPMAACPGT 101
            G+ SR    T   N      G GVRLGGAL  G QYG NN V  N I + +  GVK M  PQ  ICGN +    G D      S G FA+ +DP A+C G+
Sbjct:  274 GLDSRGDGNTFRYNETYGNVGGGVRLGGALVDGEQYGKNNNVYDNIIYDNIAGGVKFMVTPQGKICGNTMWNNTGGD------SFGDFANQFDPKASCSGS 368          
BLAST of mRNA_P-fluviatile_contig52.11541.1 vs. uniprot
Match: A0A1Y0IFB0_9GAMM (Secreted protein n=2 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0IFB0_9GAMM)

HSP 1 Score: 63.5 bits (153), Expect = 3.820e-9
Identity = 43/107 (40.19%), Postives = 54/107 (50.47%), Query Frame = 0
Query:    1 GIGSRASFTTIIDNHVEEATGAGVRLGGALARGVQYGINNKVIGNRIKNCLNSGVKIMSGPQDTICGNLITPPPGVDEADYKFSRGTFADDYDPMAACPGTEEPTSP 107
            G  +R        N     TGAGVRLGG L +G QYGINN+V GN I    ++GVK+MS PQD IC N++        +D+  + G     YDP   C      T P
Sbjct:  298 GFDARGDNNIFRYNIAHTNTGAGVRLGGDLHQGRQYGINNQVYGNIIYGNGHAGVKVMSYPQDQICSNMLFDN---GRSDFYGNSGIV---YDPGEDCQEPPPETPP 398          
BLAST of mRNA_P-fluviatile_contig52.11541.1 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM)

HSP 1 Score: 63.2 bits (152), Expect = 5.060e-9
Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = 0
Query:    1 GIGSRASFTTIIDNHVEEATGAGVRLGGALARGVQYGINNKVIGNRIKNCLNSGVKIMSGPQDTICGNLITPPPGVDEADYKFSRGTFADDYDPMAACPGTE 102
            G  +R  +  I  N      GAG+R+GG +  G QYG+ N+V GN+I +  NSG+KIM+ PQ  +CGN +T      + +      TF   YDP   C  +E
Sbjct:  282 GFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGNSMTDN---SKGNITGESATF---YDPATGCQQSE 377          
BLAST of mRNA_P-fluviatile_contig52.11541.1 vs. uniprot
Match: UPI00036CBE5E (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036CBE5E)

HSP 1 Score: 54.7 bits (130), Expect = 4.660e-6
Identity = 36/98 (36.73%), Postives = 46/98 (46.94%), Query Frame = 0
Query:    1 GIGSRASFTTIIDNHVEEATGAGVRLGGALARGVQYGINNKVIGNRIKNCLNSGVKIMSGPQDTICGNLITPPPGVDEADYKFSRGTFADDYDPMAAC 98
            G  +R  +  I  N   E  GAGVR+GG L +G QYG+ N+V G          VK+M+ PQ  ICGN +       + D      TF   YDP   C
Sbjct:  278 GFDARGDYNIIRYNISYENKGAGVRIGGNLVKGKQYGVYNEVYGXXXXXXXXXXVKVMAYPQQYICGNAMGDN---SKGDIGGDSATF---YDPDHRC 369          
BLAST of mRNA_P-fluviatile_contig52.11541.1 vs. uniprot
Match: A0A261GV77_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GV77_9GAMM)

HSP 1 Score: 52.8 bits (125), Expect = 2.200e-5
Identity = 34/91 (37.36%), Postives = 49/91 (53.85%), Query Frame = 0
Query:   11 IIDNHVEEAT-GAGVRLGGALARGVQYGINNKVIGNRIKNCLNSGVKIMSGPQDTICGNLITPPPGVDEA--DYKFSRGTFADDYDPMAAC 98
            I+ N++  A  GAG+R+GG +  G QYG+ N V  N   +  N+ VK+M+ PQ  +CGN        D A  DY    G +   Y+P A+C
Sbjct:  287 ILRNNISFANNGAGIRIGGHMVNGYQYGVENDVYSNVFFDNGNAAVKMMAYPQSNVCGN-----DSYDNALSDYVGISGAY---YEPDASC 369          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig52.11541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K4I7_9PHAE1.540e-1650.00Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
UPI0019FF49312.100e-1143.56DUF1565 domain-containing protein n=1 Tax=Chlorofl... [more]
A0A1Y0IFB0_9GAMM3.820e-940.19Secreted protein n=2 Tax=Oleiphilus messinensis Ta... [more]
A0A261GHV7_9GAMM5.060e-937.25DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]
UPI00036CBE5E4.660e-636.73right-handed parallel beta-helix repeat-containing... [more]
A0A261GV77_9GAMM2.200e-537.36DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 37..59
e-value: 13.0
score: 14.8
coord: 6..28
e-value: 80.0
score: 12.1
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..74
e-value: 4.6E-6
score: 27.6
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 5..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig52contigP-fluviatile_contig52:50190..51884 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig52.11541.1mRNA_P-fluviatile_contig52.11541.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig52 50189..51884 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig52.11541.1 ID=prot_P-fluviatile_contig52.11541.1|Name=mRNA_P-fluviatile_contig52.11541.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=134bp
GIGSRASFTTIIDNHVEEATGAGVRLGGALARGVQYGINNKVIGNRIKNC
LNSGVKIMSGPQDTICGNLITPPPGVDEADYKFSRGTFADDYDPMAACPG
TEEPTSPPTAEPTSPPTAEPTNPSTAAPTTSPTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence