prot_P-fluviatile_contig51.11478.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig51.11478.1
Unique Nameprot_P-fluviatile_contig51.11478.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1240
Homology
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BLAST of mRNA_P-fluviatile_contig51.11478.1 vs. uniprot
Match: A0A6H5JGI2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGI2_9PHAE)

HSP 1 Score: 545 bits (1405), Expect = 1.020e-170
Identity = 466/845 (55.15%), Postives = 526/845 (62.25%), Query Frame = 0 
Query:   23 MALPAGMGLSAAAAAAGYAFQHSPSLPPHQQSVAELLLSGYR-----------------------------SPSPTAETGAIHLTRSASGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SIATAVAEMRAGKRAVLPGRGAGLQAALCGKRSRRALRVAEALSDGAKKCFPRQAAQAARLSEVEEQLDKRINRVRRRLLHKLEQLEWPSKSLRVWLSLEVVSAPKPRHLRRXXXXXXXXXXXXXXXXGRR---------TGGKGKQGK----------------GRREGSGHGTWCKPEEAAAAXXXXXXXXXXXXXXXXXXXXXGEGGDRFRAAEAKLGLTGGTEKWGAEGKARGQAQTAAAAAAATEGRGEECELDWFVQARLEGTLVGAPSDGVERRFTSFFSSVALELD-RGFPDVAAVEWVRSAGCEDLHCVELRLPLAGCLARGLKEISVKASLVRRVDGNRPRRFV-----------------LSSPLRQALGMSERVETKVVLVAAVFEALRQKGMLSGGE--------------------GPRGGMGREGGGRAASTMLYCDPALARVLGASAFPFSQLEEALSPHVEPAPPPSFVAKVSLEKGSAEEKFLDVTVHTETPFQLQAANSLLGGVGGGGGESDLADDASAGGVAKMSNSNLNGXXXXXXGGDGGVSGAGHDERRAAEPAGRGAPRALGVRTLAEREAEAQLDRRVAYLAEAVNASARRAAMLRALSAAPLEYVPRLEAQMLADQERLAAAAGIGWPGRDAEVEPWLDAGVCAQVVRARAETQRGQDKRQA---DMRLKVQQNAARAEAA 768
            MALPAGMGLSAAAAAAGY+FQ+SPS P     +A   L                                   SPT  TGAIHLTRSASGRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SI +AVA++R G+ AVLPGRGAGLQAALCGKR RRALR +E LSD  KK FPRQA QAARL+EVEEQLDKRINRVRR+LL+KLEQLEWPSK LR WLSLEV SAPKP    R     XXXX       G++         T GKG +G                  RR G+G       +EAA+     XXXXXXXXXXXXXXXXX +  D  +A +A                                G G + EL+WFV ARL+G+LVGAP+DGVERRFTSFFSSVALELD + FPDVAAVEWVRSA CE+LHCVELRLPLAGCL+RGLKEISVKA L  RVD +RPRRFV                 +S+PLRQ L +++RV+TK VL+AAV+EALR KG L GG                                     TML+CDP LARVLGAS+FPFSQLEEAL PHVEPA  PS VA VSLEKG+A E   DVTV TETPFQL+AA SLLG  GG G          AGG A+ +             G GG    G          GRG  RALGV T+ EREAE Q+ R+++YLAEAVNAS RRAAMLRALS APLE  PRL+AQM AD+E LAAAA +  P R+ E E W DAGVCA+VV+ RAE  R +  +QA   D+R++ +QNA   EAA
Sbjct:    1 MALPAGMGLSAAAAAAGYSFQNSPSAPQXXXXLAVTDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLGTSPTTPTGAIHLTRSASGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIISAVADLRQGRSAVLPGRGAGLQAALCGKRGRRALRTSEGLSDEVKKRFPRQADQAARLTEVEEQLDKRINRVRRKLLYKLEQLEWPSKCLRTWLSLEVTSAPKPGQRGRQPPQQXXXXSRPGAESGKQGNRRGKMPATSGKGTEGTPPSXXXXXXXXXXXVGARRAGAG-----TEQEAASVAAPKXXXXXXXXXXXXXXXXXXD--DGMKAVDAG-------------------------------GDGGDVELEWFVLARLQGSLVGAPADGVERRFTSFFSSVALELDGKAFPDVAAVEWVRSARCEELHCVELRLPLAGCLSRGLKEISVKAVLAARVDEDRPRRFVPPKSCPVRTARHLVPFVVSAPLRQVLRLTKRVDTKPVLMAAVYEALRLKGALPGGTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMLHCDPELARVLGASSFPFSQLEEALGPHVEPAESPSLVATVSLEKGNAVETCADVTVDTETPFQLRAAQSLLGSDGGRG----------AGGSAEGAPRQNGALAVEQRAGLGGGPAEG----------GRGHTRALGVPTVEEREAELQIGRQISYLAEAVNASGRRAAMLRALSEAPLEAFPRLDAQMRADEELLAAAADVERPRREGEAELWSDAGVCARVVQGRAEALRKEQMQQALEADIRVRAEQNALAEEAA 787
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig51.11478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGI2_9PHAE1.020e-17055.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..205
NoneNo IPR availableCOILSCoilCoilcoord: 764..784
NoneNo IPR availableCOILSCoilCoilcoord: 816..836
NoneNo IPR availablePANTHERPTHR46007FAMILY NOT NAMEDcoord: 175..1031
NoneNo IPR availablePANTHERPTHR46007:SF1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12coord: 175..1031
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..1240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
IPR036885SWIB/MDM2 domain superfamilyGENE3D1.10.245.10coord: 446..549
e-value: 4.7E-5
score: 25.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig51contigP-fluviatile_contig51:494787..511658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig51.11478.1mRNA_P-fluviatile_contig51.11478.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig51 494787..511658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig51.11478.1 ID=prot_P-fluviatile_contig51.11478.1|Name=mRNA_P-fluviatile_contig51.11478.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1240bp
PIPYLANRQCVGPQPGVHLRFAMALPAGMGLSAAAAAAGYAFQHSPSLPP
HQQSVAELLLSGYRSPSPTAETGAIHLTRSASGRAAASAAAAAAAASATS
DPGGLMRQEEPRVISVTSPPPPAPPPPSIATAVAEMRAGKRAVLPGRGAG
LQAALCGKRSRRALRVAEALSDGAKKCFPRQAAQAARLSEVEEQLDKRIN
RVRRRLLHKLEQLEWPSKSLRVWLSLEVVSAPKPRHLRRRRQQQLLLLQQ
QQQQQGRRTGGKGKQGKGRREGSGHGTWCKPEEAAAAAAAAAVAGLVGEA
GGAGAEGAGEGGDRFRAAEAKLGLTGGTEKWGAEGKARGQAQTAAAAAAA
TEGRGEECELDWFVQARLEGTLVGAPSDGVERRFTSFFSSVALELDRGFP
DVAAVEWVRSAGCEDLHCVELRLPLAGCLARGLKEISVKASLVRRVDGNR
PRRFVLSSPLRQALGMSERVETKVVLVAAVFEALRQKGMLSGGEGPRGGM
GREGGGRAASTMLYCDPALARVLGASAFPFSQLEEALSPHVEPAPPPSFV
AKVSLEKGSAEEKFLDVTVHTETPFQLQAANSLLGGVGGGGGESDLADDA
SAGGVAKMSNSNLNGSGSGSSGGDGGVSGAGHDERRAAEPAGRGAPRALG
VRTLAEREAEAQLDRRVAYLAEAVNASARRAAMLRALSAAPLEYVPRLEA
QMLADQERLAAAAGIGWPGRDAEVEPWLDAGVCAQVVRARAETQRGQDKR
QADMRLKVQQNAARAEAAARLAAQEKQKQLLLRQQFRQQQEQEARAAAAA
AEAAAAATAKQTAERKRMLQLQQQQLLLRMREAQERSLRGERDAERRQQL
LQLETQQQLKAHRAARLPAAAAAVEMSSVDIQEHGGDMLQMALPQPHNLN
QEQHHHHQHRQQQQQQQQQQQQQHEPLLFRSRQGGPSPSPSASSHRSIAR
PGGGGDAASAFGLQTLPGHGLPPGALPSWPDEIGRGVEGDQPEHRDQHRP
PLLPPLGHEAGQVLHEFPQPQQHQEHQQQQYREEGADPAADERERQLEQT
LLSLHDEADPLPLRQQNPPQPRQRWPASAPEERQQASEWQLQQQLRQQQL
RQQQQHQLRQQHQQQYQQHQHQHQQQEYHRRHHHQQQSPDPPQNIDRHGQ
PWQRQFQQLQPSPVSQHQQQQQQLQQQQPRVERAWPDRVGEVEIRSFSEG
RSGMSEEPQQRKRRRQQQTESLPPQIGWQSQAERQQQRRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036885SWIB_MDM2_dom_sf