prot_P-fluviatile_contig5.11261.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig5.11261.1
Unique Nameprot_P-fluviatile_contig5.11261.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length326
Homology
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BLAST of mRNA_P-fluviatile_contig5.11261.1 vs. uniprot
Match: D8LRC5_ECTSI (Cyclin_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC5_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 2.410e-21
Identity = 108/270 (40.00%), Postives = 124/270 (45.93%), Query Frame = 0 
Query:   57 MEPFEMERFVDRLVEDEPPS-W-RGGRAGGGGCGGFEDVWEPTNRAAVG-------AANLFLKPIYDDWQEQQLLQQQRQQQHPRPLLGGA-----PRCVAHQQLTNHAGPMVVPQVVPQDPILD---TPCRAIPEILPS--------------VTLGLVRKGGGGE--GGRKNGIAGFEPGLIYNIPSPTN---AYSACLQVPMAPLRQPFVGRSRVELYSPAGGCDGSSSSSYRVIVQSGER-----------FATYLN--ERSNNIP 277
            MEPF+ ERFVDRLVED  P+ W RGG  GGGG      VWE               AA LF +P+++  + Q  L             GG                       +P +VP DPILD   TPCRA+   LPS              VT GLVR   GG    G+KN IA F P L+YNIP       +Y+A LQVPMAPLRQP  GR    LYS       SS    RV++QS ER            ATYLN  E SNNIP
Sbjct:    1 MEPFDAERFVDRLVEDPAPTAWGRGGLVGGGGR-----VWEXXXXXXXXXXXXXXXAAKLF-QPVFNFDEHQPYLVGD----------GGGYXXXXXXXXXXXXXXXXXXSQDMPMIVPHDPILDAIFTPCRAV---LPSTHHYHHPAEAAPVAVTCGLVRVPSGGRFGAGKKNEIAAFRPELLYNIPPXXXXEVSYAASLQVPMAPLRQPSGGR---RLYS-------SSPPRGRVMIQSAERSPAAAAARLVAVATYLNKEENSNNIP 241
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig5.11261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRC5_ECTSI2.410e-2140.00Cyclin_C domain-containing protein n=2 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig5contigP-fluviatile_contig5:3884032..3885009 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig5.11261.1mRNA_P-fluviatile_contig5.11261.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig5 3883845..3887513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig5.11261.1 ID=prot_P-fluviatile_contig5.11261.1|Name=mRNA_P-fluviatile_contig5.11261.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=326bp
MEAATWVPASWGGHGVVPSGGDEIISFECTTAVGHHHSSTGIRVDGSSVI
DDSDEEMEPFEMERFVDRLVEDEPPSWRGGRAGGGGCGGFEDVWEPTNRA
AVGAANLFLKPIYDDWQEQQLLQQQRQQQHPRPLLGGAPRCVAHQQLTNH
AGPMVVPQVVPQDPILDTPCRAIPEILPSVTLGLVRKGGGGEGGRKNGIA
GFEPGLIYNIPSPTNAYSACLQVPMAPLRQPFVGRSRVELYSPAGGCDGS
SSSSYRVIVQSGERFATYLNERSNNIPGNVSAAAAANNPAPLTGADAPPP
SSMTTSATLFSAVRRSPYLWDAGTS*
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