prot_P-fluviatile_contig5.11246.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig5.11246.1
Unique Nameprot_P-fluviatile_contig5.11246.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length41
Homology
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Match: D8LRD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD4_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.360e-22
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 40
            MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG
Sbjct:   29 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 68          
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Match: A0A024TNF2_9STRA (Protein transport protein Sec61 subunit beta n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TNF2_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.700e-16
Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 40
            +RFYTDDAPGLR+GPT VLV +L F+G VVLLH+WGKF+G
Sbjct:   45 LRFYTDDAPGLRVGPTTVLVGALLFVGFVVLLHVWGKFRG 84          
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Match: A0A7S3V0E6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V0E6_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.760e-16
Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    1 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFK 39
            +RFYTDDAPGL++GPT VLVFS+ FIG VV+LHIWGKF+
Sbjct:   62 LRFYTDDAPGLKVGPTTVLVFSVMFIGFVVMLHIWGKFR 100          
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Match: A0A485LI25_9STRA (Protein transport protein Sec61 subunit beta n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LI25_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.870e-16
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 40
            +RFYTDDAPGL++GPT VLV  L F+G VVLLH+WGKF+G
Sbjct:   47 LRFYTDDAPGLKVGPTTVLVMCLMFVGFVVLLHVWGKFRG 86          
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Match: A0A024GLR5_9STRA (Protein transport protein Sec61 subunit beta n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLR5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 8.960e-16
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 40
            +RFYTDD+PGL+IGPT VLV  L F+G VVLLH+WGKF+G
Sbjct:   52 LRFYTDDSPGLKIGPTTVLVLCLVFVGLVVLLHVWGKFRG 91          
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Match: A0A5D6XV10_9STRA (Protein transport protein Sec61 subunit beta n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV10_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.720e-15
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 40
            +RFYTDD+PGL+IGPT VLV  L F+G VVLLH+WGKF+G
Sbjct:   50 LRFYTDDSPGLKIGPTTVLVMCLLFVGFVVLLHVWGKFRG 89          
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Match: A0A6A5A9J6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A9J6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.730e-15
Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 40
            +RFYTDDAPGL++GPT VLV +L F+G VVLLH+WGKF+G
Sbjct:   64 LRFYTDDAPGLKVGPTTVLVGALLFVGFVVLLHVWGKFRG 103          
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Match: A0A8K1CUR3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUR3_PYTOL)

HSP 1 Score: 72.0 bits (175), Expect = 1.810e-15
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 40
            +RFYTDD+PGL+IGPT VLV  L F+G VVLLH+WGKF+G
Sbjct:   52 LRFYTDDSPGLKIGPTTVLVLCLMFVGFVVLLHVWGKFRG 91          
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Match: A0A7S3XTM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTM9_HETAK)

HSP 1 Score: 72.4 bits (176), Expect = 1.970e-15
Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    1 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFK 39
            +RFYTD+APGL+IGPT VL FS++FIG VVLLHIWGKF+
Sbjct:   69 LRFYTDEAPGLKIGPTAVLFFSVSFIGVVVLLHIWGKFR 107          
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Match: K3WSF7_GLOUD (Protein transport protein Sec61 subunit beta n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSF7_GLOUD)

HSP 1 Score: 72.0 bits (175), Expect = 2.060e-15
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 40
            +RFYTDD+PGL+IGPT VLV  L F+G VVLLH+WGKF+G
Sbjct:   57 LRFYTDDSPGLKIGPTTVLVMCLMFVGFVVLLHVWGKFRG 96          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig5.11246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRD4_ECTSI1.360e-22100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A024TNF2_9STRA3.700e-1675.00Protein transport protein Sec61 subunit beta n=2 T... [more]
A0A7S3V0E6_9STRA5.760e-1676.92Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A485LI25_9STRA7.870e-1672.50Protein transport protein Sec61 subunit beta n=2 T... [more]
A0A024GLR5_9STRA8.960e-1672.50Protein transport protein Sec61 subunit beta n=1 T... [more]
A0A5D6XV10_9STRA1.720e-1572.50Protein transport protein Sec61 subunit beta n=1 T... [more]
A0A6A5A9J6_9STRA1.730e-1572.50Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A8K1CUR3_PYTOL1.810e-1572.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3XTM9_HETAK1.970e-1576.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3WSF7_GLOUD2.060e-1572.50Protein transport protein Sec61 subunit beta n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016482Protein transport protein SecG/Sec61-beta/SbhPFAMPF03911Sec61_betacoord: 1..36
e-value: 3.5E-18
score: 65.3
IPR030671Protein transport Sec61-beta/SbhPANTHERPTHR13509SEC61BETA-PROV PROTEINcoord: 1..39
NoneNo IPR availablePANTHERPTHR13509:SF3PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETAcoord: 1..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..28
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig5contigP-fluviatile_contig5:3786845..3786967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig5.11246.1mRNA_P-fluviatile_contig5.11246.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig5 3785103..3788238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig5.11246.1 ID=prot_P-fluviatile_contig5.11246.1|Name=mRNA_P-fluviatile_contig5.11246.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=41bp
MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016482SecG/Sec61-beta/Sbh
IPR030671Sec61-beta/Sbh