prot_P-fluviatile_contig23.5212.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig23.5212.1
Unique Name	prot_P-fluviatile_contig23.5212.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	460

Homology

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BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Match: D7G5I7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I7_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 2.650e-131
Identity = 183/197 (92.89%), Postives = 191/197 (96.95%), Query Frame = 0

Query:    1 MSGSAKGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFGEISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLDKVIRK 197
            MSGSA+GGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSA+MAAGGDPSQLP+DHVQDDFED    VY ELSKFGEISEMNVCDNLGDHLIGNVYVKF+DEEDAD+ALKGLMGRWYA RPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYL+K++RK
Sbjct:   53 MSGSARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAVMAAGGDPSQLPKDHVQDDFEDXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFLDEEDADSALKGLMGRWYASRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLEKLLRK 249

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BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Match: A0A835YWK2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWK2_9STRA)

HSP 1 Score: 335 bits (859), Expect = 4.810e-111
Identity = 148/196 (75.51%), Postives = 172/196 (87.76%), Query Frame = 0

Query:    2 SGSAKGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFGEISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLDKVIRK 197
            +G  +GGAEHLARIHGTEEDKVNCPF+YKIGACRHGDRCSRQHHKPPFSQT+L+ ++YQNP SA++AAGGDP+ + +D   D+FEDF+EEVY EL KFG + EM+VCDNLGDHL+GNVY+KF DEEDADAALKGL GRWY GRP++ EFSPV DFREARCRQ+DEGTC RGGQCNFMHV+ V + V+ YLDKV RK
Sbjct:   15 AGGPRGGAEHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPPFSQTLLLSHMYQNPASALLAAGGDPNAIDQDAANDEFEDFYEEVYEELCKFGSVEEMHVCDNLGDHLVGNVYIKFSDEEDADAALKGLFGRWYGGRPMVPEFSPVNDFREARCRQYDEGTCGRGGQCNFMHVRHVSKDVVRYLDKVARK 210

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BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Match: A0A7S3XMX4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMX4_HETAK)

HSP 1 Score: 329 bits (844), Expect = 1.920e-108
Identity = 147/198 (74.24%), Postives = 171/198 (86.36%), Query Frame = 0

Query:    5 AKGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFGEISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLDKVIRKKKGGG 202
            A+GGAEHLARIHGTEEDKVNCPF++KIGACRHGDRCSRQHHKPPFSQT+LVQ++YQNP SAI AAGGDP+ +     Q+DFE+F+EEV+ ELSKFG + E+N+CDNLGDHL+GNVY K+ DEEDAD+ALK L GR+YAGRP++CEFSPVTDFREARCRQFDEGTC RGG CNFMHVK VPR +   L +    K+GGG
Sbjct:   20 ARGGAEHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTVLVQHMYQNPASAIAAAGGDPNSIDHRQAQEDFEEFYEEVFEELSKFGAVEELNICDNLGDHLVGNVYAKYADEEDADSALKALYGRFYAGRPLICEFSPVTDFREARCRQFDEGTCARGGYCNFMHVKAVPRGLQRDLLRKFAPKRGGG 217

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BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Match: A0A835ZC00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC00_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.380e-107
Identity = 148/196 (75.51%), Postives = 170/196 (86.73%), Query Frame = 0

Query:    8 GAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFGEISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLDKVIRKKKGGGA 203
            GAEHLARIHGTEEDKVNCPF+YKIGACRHGDRCSRQHHKPPFSQTIL+ +++QNP SA++AAGG+P  + ++   D+FEDF+EEVY EL KFG + EMNVCDNLGDHL+GNVYVKF DEEDAD ALKGL GRWYAGRP++ EFSPVTDFREARCRQ+DEGTC RGGQCNFMHV+ V R V  Y DK+ R+ + GGA
Sbjct:   62 GAEHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPPFSQTILLSHMFQNPASALIAAGGNPETIDQEATNDEFEDFYEEVYEELCKFGTVEEMNVCDNLGDHLVGNVYVKFSDEEDADNALKGLFGRWYAGRPMVPEFSPVTDFREARCRQYDEGTCGRGGQCNFMHVRHVSRDVARYCDKMARRARRGGA 257

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BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Match: A0A6H5L153_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L153_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 9.130e-107
Identity = 151/165 (91.52%), Postives = 156/165 (94.55%), Query Frame = 0

Query:    1 MSGSAKGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFGEISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFD 165
            MSGSA+GGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSA+MAAGGDPSQLP+DHVQDDF         ELSKFGEISEMNVCDNLGDHLIGNVYVKF+DEEDAD+ALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFD
Sbjct:    8 MSGSARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAVMAAGGDPSQLPKDHVQDDFXXXXXXXXXELSKFGEISEMNVCDNLGDHLIGNVYVKFLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFD 172

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BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Match: A0A7S3ZUE9_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUE9_9STRA)

HSP 1 Score: 312 bits (800), Expect = 1.140e-99
Identity = 139/196 (70.92%), Postives = 166/196 (84.69%), Query Frame = 0

Query:    3 GSAKGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFGEISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLDKVIRKK 198
            G A+GGA HLARIHGTEEDKVNCPF++KIGACRHGDRCSRQHHKPPFSQT++VQ++YQNP S I AAGGDPSQL    VQ++F+DF+EEVY EL+ +GEI E+NVC+NLGDH++GNVY KF DEE +DAALK L GR+YAGRP++CEFSPVTDFREARCRQ+DE  C RGG CNFMH++   R +   L+K  +KK
Sbjct:  124 GGARGGATHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPASQIAAAGGDPSQLDPKKVQEEFDDFYEEVYDELAGYGEIEELNVCENLGDHMVGNVYCKFADEEHSDAALKALFGRFYAGRPLVCEFSPVTDFREARCRQYDEAVCTRGGYCNFMHIRTPSRSLRKDLEKRYKKK 319

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BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Match: A0A024TD10_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TD10_9STRA)

HSP 1 Score: 307 bits (786), Expect = 2.890e-99
Identity = 141/201 (70.15%), Postives = 167/201 (83.08%), Query Frame = 0

Query:    7 GGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFGEISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLDKVIR-----KKKGGG 202
            GGAEHLARIHGTEED+VNCPF++KIGACRHGDRCSR H+KP FSQT+LV+++YQNP+S ++AA GDP+QL +  V +DFEDFFEEV+ EL KFG++ E+NVCDNLGDHL+GNVY KF DEE A AA   L GR+Y GRPIMCE+SPVTDFREARCRQFDEGTCNRGG CNFMH+K V R +M  L++        +KKGGG
Sbjct:   36 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRSHNKPVFSQTLLVKHMYQNPLSTVIAANGDPNQLDQKTVDEDFEDFFEEVFEELCKFGKLEELNVCDNLGDHLVGNVYAKFEDEECAAAAHTALYGRFYGGRPIMCEYSPVTDFREARCRQFDEGTCNRGGYCNFMHIKMVSRAMMIELERHYNTYGDDEKKGGG 236

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BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Match: T0S0M7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S0M7_SAPDV)

HSP 1 Score: 307 bits (787), Expect = 4.600e-99
Identity = 141/193 (73.06%), Postives = 163/193 (84.46%), Query Frame = 0

Query:    7 GGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFGEISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLDKVIRKKK 199
            GGAEHLARIHGTEED+VNCPF++KIGACRHGDRCSR H+KP FSQTILV+++YQNP+S I+AA GDPSQL +  V +DFEDFFEEVY EL KFG++ E+NVCDNLGDHL+GNVY KF DEE A AA K L GR+Y GRP++CEFSPVTDFREARCRQFDEGTCNRGG CNFMH+K V   +M  L++    KK
Sbjct:   51 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVKHMYQNPLSVIIAANGDPSQLDQKTVDEDFEDFFEEVYEELCKFGKVDELNVCDNLGDHLVGNVYAKFDDEECAAAAQKALYGRFYGGRPLICEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKMVSHAMMIELERHYNIKK 243

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BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Match: F0Y2V2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2V2_AURAN)

HSP 1 Score: 302 bits (774), Expect = 1.420e-98
Identity = 133/185 (71.89%), Postives = 158/185 (85.41%), Query Frame = 0

Query:    9 AEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFGEISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLDK 193
            A HLARIHGTEEDKVNCPF++KIGACRHGDRCSRQHHKPPFSQT++VQ++YQNP S I AAGGDPSQL    VQ++F+DF+EEVY EL+K+GEI E+NVC+NLGDH++GNVY KF DEE  DA+LK L GR+YAGRP++CEFSPVTDFREARCRQ+DE  C RGG CNFMH++   R +   L+K
Sbjct:    1 ATHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPASQIAAAGGDPSQLDPKKVQEEFDDFYEEVYDELAKYGEIEELNVCENLGDHMVGNVYAKFADEEHTDASLKALFGRFYAGRPLVCEFSPVTDFREARCRQYDEAVCTRGGYCNFMHIRTPSRSLRRDLEK 185

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BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Match: H3G5Y3_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3G5Y3_PHYRM)

HSP 1 Score: 302 bits (774), Expect = 2.560e-98
Identity = 131/189 (69.31%), Postives = 161/189 (85.19%), Query Frame = 0

Query:    9 AEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFGEISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLDKVIRK 197
            AEHLARIHGTEED+VNCPF++KIGACRHGDRCSR H+KP FSQTILV ++YQNP++ ++A  GDP+ L + HV ++FEDF+EE++ EL KFG++ E+N+CDNLGDHL+GNVY KF DEE A AA K L GR+YAGRP++CEFSPVTDFREARCRQFDEGTCNRGG CNFMH+K VPR +   L+K+  +
Sbjct:    1 AEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPIAQVIAQNGDPASLDQRHVDEEFEDFYEEIFEELCKFGKLEELNICDNLGDHLVGNVYAKFDDEEHAAAAQKALYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPRAMQRELEKMFNR 189

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig23.5212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G5I7_ECTSI	2.650e-131	92.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835YWK2_9STRA	4.810e-111	75.51	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A7S3XMX4_HETAK	1.920e-108	74.24	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A835ZC00_9STRA	1.380e-107	75.51	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5L153_9PHAE	9.130e-107	91.52	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A7S3ZUE9_9STRA	1.140e-99	70.92	Hypothetical protein n=4 Tax=Pelagomonas calceolat...	[more]
A0A024TD10_9STRA	2.890e-99	70.15	Uncharacterized protein n=7 Tax=Aphanomyces TaxID=...	[more]
T0S0M7_SAPDV	4.600e-99	73.06	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
F0Y2V2_AURAN	1.420e-98	71.89	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
H3G5Y3_PHYRM	2.560e-98	69.31	Uncharacterized protein n=2 Tax=Phytophthora TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009145	U2 auxiliary factor small subunit	PRINTS	PR01848	U2AUXFACTOR	coord: 110..132 score: 62.25 coord: 82..97 score: 44.89 coord: 25..44 score: 77.27 coord: 172..184 score: 61.19 coord: 44..64 score: 41.34 coord: 137..161 score: 62.36
IPR009145	U2 auxiliary factor small subunit	PANTHER	PTHR12620	U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT	coord: 9..272
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 155..181 e-value: 3.5E-5 score: 33.2 coord: 20..46 e-value: 0.23 score: 20.5
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 22..45 e-value: 4.5E-6 score: 26.4 coord: 157..181 e-value: 9.4E-7 score: 28.6
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 155..182 score: 14.202
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 19..47 score: 12.361
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 74..149 e-value: 3.7E-9 score: 46.4
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 52..149 e-value: 0.0096 score: 24.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 91..146 e-value: 4.7E-5 score: 23.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 51..153 score: 11.929
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 50..152 e-value: 1.0E-30 score: 108.1
None	No IPR available	PANTHER	PTHR12620:SF8	U2 SMALL NUCLEAR RNA AUXILIARY FACTOR 1	coord: 9..272
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 38..161

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig23	contig	P-fluviatile_contig23:1879607..1889560 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig23.5212.1	mRNA_P-fluviatile_contig23.5212.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig23 1878505..1890391 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig23.5212.1 ID=prot_P-fluviatile_contig23.5212.1|Name=mRNA_P-fluviatile_contig23.5212.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=460bp
MSGSAKGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFS
QTILVQNLYQNPVSAIMAAGGDPSQLPEDHVQDDFEDFFEEVYLELSKFG
EISEMNVCDNLGDHLIGNVYVKFMDEEDADAALKGLMGRWYAGRPIMCEF
SPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLDKVIRKKKG
GGADYDDDASERRSRKRSRSRSRDRDRKKRSRSRERRSSRRSRSRERRSH
RDKDKDRDRRDRDRDRDSKKDRKDKDKDKEKDRSERKRRHYTEAPDGASD
KAASKDDKNKDKDKEDTHGEDMKGGDNGTTSPGPGADAEAGPEVSKKGTE
NGAGATGGDESVEANGAGAEDGSKSASNGVAAASGGAGVNLVPSADDDDD
EDEAEEAQDDGEEKKGSRGDKRTENGGEVEDEEGSGGNKATRGGGGAEDG
DGDGDGEDE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009145	U2AF_small
IPR000571	Znf_CCCH
IPR003954	RRM_dom_euk
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf