prot_P-fluviatile_contig22.4987.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig22.4987.1
Unique Nameprot_P-fluviatile_contig22.4987.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length408
Homology
BLAST of mRNA_P-fluviatile_contig22.4987.1 vs. uniprot
Match: D7FGX1_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX1_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 6.970e-54
Identity = 186/497 (37.42%), Postives = 230/497 (46.28%), Query Frame = 0
Query:    2 SLPLTLVGFSKGAVVLNQLVTELGRETEPEAASPRTPSGSSKRRGSCDDLGPVPFANNCKRSRVSINRS-----DCGGG--ERSISSSEGILTSPSSPADDRSV----ASGEWSRSMSWDGEGEQDTERPGGGEVWMDRSRTTGQRNSNRSNQ------QSRIGSMWYRLCSTLSMLRSSARPSFSASPVSSESESQA-------------------------------LRELDRGAGVVAGRNGSETYQGPGDLIDLGSPSTRSGSARKRLRRRMRTCASSPSSCLSSG--EGSSSSAGRERTKSSDCPAQRLFDRVAAIHWVDGGNGGEAGSSFPTNTCSLARLASNPNLAVRVHGTPYQWGQCGLGMVVERPFLAFEAEAFLATIEGFRQAVRAREGQGSDCATTKSTRA----GMGRVKPAGRF--------------------------------------GAACDVKRFFYFEDEQPSLENHFRVLKELSV 406
            SLPLTLVGFSKG VVLNQLVTEL     P AA+P  P  +S  R   D  G +  A N KRSRVS++ S      CGGG  ER ++ SEG LT+P SPADD  +    AS  W   M W+G  +++     GG         TG    +   Q      Q + GS+W RL S   M R   R   S S  S+ S  ++                                             +G   ++G         P++ SGS     +   R      ++C+  G   G  +   R R  +  C A RLF RVAA+HWVDG N   AGS FPTN  SLARLA+ PNL++RVHGTPYQW          RP+LA EA AFLA++EGFR+A+R+RE +GS  AT  ST A    G G     G F                                      GAA DVKR  YFE+EQPSLENHFRVL +L+ 
Sbjct:  946 SLPLTLVGFSKGVVVLNQLVTELACSPPPAAAAPALPKTNSSTRSDVDGDG-IKLAGNRKRSRVSMSNSRRCSSSCGGGGGER-LACSEGDLTNPPSPADDGDIGATMASSNWP--MGWEGGRDKERREDAGG---------TGNGTPHDGIQDGYKPHQDKTGSLWSRLWSAFGMSRLKTRTISSTSLPSASSTDESPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPLKWRGEKRXXXXNRPTSISGSTPPGEQGDSR---GGNTTCIGGGTLSGCDAVCERGRDDNGSCAANRLFGRVAAVHWVDGANAAVAGS-FPTNLRSLARLAALPNLSIRVHGTPYQWSS------QYRPWLASEATAFLASVEGFRRALRSRE-EGSAFATKSSTTASRMSGGGDGGEVGVFSTDAAARXXXXXXXXXXXXXESEGSGGEGSKGGGSRVGGAAFDVKRLVYFENEQPSLENHFRVLADLNT 1418          
BLAST of mRNA_P-fluviatile_contig22.4987.1 vs. uniprot
Match: A0A6H5JB46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB46_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 6.810e-51
Identity = 182/498 (36.55%), Postives = 228/498 (45.78%), Query Frame = 0
Query:    2 SLPLTLVGFSKGAVVLNQLVTELGRETEPEAASPRTPSGSSKRRGSCDDLGPVPFANNCKRSRVSINR-----SDCGGGE-RSISSSEGILTSPSSPADDRSVA----SGEWSRSMSWDGEGEQDTERPGGGEVWMDRSRTTGQRNSNRSNQQSRIGSMWYRLCSTLSMLRSSARPSFSASPVSSESESQALRELDRGAGVVAGR--------------------------------------NGSETYQGPGDLIDLGSPSTRSGSARKRLRRRMRTCASSPSSCLSSGEGSSSSAGRERTKSSDC---PAQRLFDRVAAIHWVDGGNGGEAGSSFPTNTCSLARLASNPNLAVRVHGTPYQWGQCGLGMVVERPFLAFEAEAFLATIEGFRQAVRAREGQGSDCATTKSTRAGM-------GRV---------------------------------KPAGRF--GAACDVKRFFYFEDEQPSLENHFRVLKELSV 406
            SLPLTLVGFSKG VVLNQLVTEL     P AA P  P   S  R   D  G +  A N KRSRVS++      S CGGG    ++ +EG LT+P SPADD  +A    SG W   M W+G  +Q+     GG    + +   G ++  + +Q  + GS+W RL S   M R   R   S S  S+ S  +A  +                                                 +G   ++G          ++ SGS     +   R      ++C+  G         ER +  D     A RLF RVAA+HWVDG N   AG+ FPTN  SLARLA+  NL++RVHGTPYQW          RP+LA EA AFLA++EGFR+A+RARE +GS  AT  ST  G        G V                                 K  G    GAACDVKR  YFE+EQPSLENHFRVL +L+ 
Sbjct:  200 SLPLTLVGFSKGVVVLNQLVTELACSPPPAAAEPALPKTYSSTRSDVDGDG-IKLAGNRKRSRVSMSNGRRCSSSCGGGSGERLACNEGDLTNPPSPADDGDIATTTASGNWP--MGWEGFRDQERREDAGGA--SNGTLHDGVQDGYKPHQD-KTGSLWSRLWSAFGMSRLKTRTISSTSLPSASSTDEAPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPLKWRGEKRXXXXXRSTSISGSTPPGEQGDSR---GGNTTCVGVGTLRGGDVVCERRRDDDGGSGAANRLFGRVAAVHWVDGANAAVAGA-FPTNLRSLARLAAFTNLSIRVHGTPYQWSS------QYRPWLASEATAFLASVEGFRRALRARE-EGSAFATKSSTTTGRMSGGGDGGEVEVFSTDXXXXXXXXXXXXXXXXXXSEGFGGEGSKGGGSRVGGAACDVKRLVYFENEQPSLENHFRVLADLNT 680          
BLAST of mRNA_P-fluviatile_contig22.4987.1 vs. uniprot
Match: A0A835ZEC5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC5_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.230e-12
Identity = 55/154 (35.71%), Postives = 74/154 (48.05%), Query Frame = 0
Query:  259 DCPAQRLFDRVAAIHWVDGGNGGEAGSSFPTNTCSLARLAS-NPNLAVRVHGTPYQWGQCGLGMVVERPFLAFEAEAFLATIEGFRQAVRAREGQGSDCATTKSTRAGMGRVKP---------AGRFGAACDVKRFFYFEDEQPSLENHFRVLK 402
            D  A+RLF RVAA+HWVD GNG   GS  P +  +LA LA+ +P++ +RVHG+PYQW         +RP+LA E +AF+  +     A RA  G                              G  G+   V+   YF D   SL  HFR+L+
Sbjct:  207 DTAARRLFSRVAAVHWVDAGNGMHRGS-LPADAAALAALAAEHPSVRLRVHGSPYQWRNA------DRPWLALERDAFVRAVG----AARAHAGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEQGSGAPVRCTEYFGDMPGSLALHFRMLE 349          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FGX1_ECTSI6.970e-5437.42Hypothetical leucine rich repeat calmodulin bindin... [more]
A0A6H5JB46_9PHAE6.810e-5136.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZEC5_9STRA1.230e-1235.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018881Uncharacterised protein family UPF0565PANTHERPTHR31296FAMILY NOT NAMEDcoord: 4..404

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:2049280..2051066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4987.1mRNA_P-fluviatile_contig22.4987.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig22 2047238..2051066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig22.4987.1 ID=prot_P-fluviatile_contig22.4987.1|Name=mRNA_P-fluviatile_contig22.4987.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=408bp
MSLPLTLVGFSKGAVVLNQLVTELGRETEPEAASPRTPSGSSKRRGSCDD
LGPVPFANNCKRSRVSINRSDCGGGERSISSSEGILTSPSSPADDRSVAS
GEWSRSMSWDGEGEQDTERPGGGEVWMDRSRTTGQRNSNRSNQQSRIGSM
WYRLCSTLSMLRSSARPSFSASPVSSESESQALRELDRGAGVVAGRNGSE
TYQGPGDLIDLGSPSTRSGSARKRLRRRMRTCASSPSSCLSSGEGSSSSA
GRERTKSSDCPAQRLFDRVAAIHWVDGGNGGEAGSSFPTNTCSLARLASN
PNLAVRVHGTPYQWGQCGLGMVVERPFLAFEAEAFLATIEGFRQAVRARE
GQGSDCATTKSTRAGMGRVKPAGRFGAACDVKRFFYFEDEQPSLENHFRV
LKELSVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018881UPF0565