prot_P-fluviatile_contig22.4882.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig22.4882.1
Unique Nameprot_P-fluviatile_contig22.4882.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length201
Homology
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Match: Q8QNF3_ESV1K (EsV-1-126 n=2 Tax=root TaxID=1 RepID=Q8QNF3_ESV1K)

HSP 1 Score: 286 bits (731), Expect = 9.880e-96
Identity = 137/199 (68.84%), Postives = 165/199 (82.91%), Query Frame = 0
Query:    1 MPELFFDVETTGLPPRGADPAKYQHYDSCRVISIAWVLRDQNTVYAQRYAVTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEIIVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRIKNSYGSFKWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDRFVVTK 199
            MPELFFDVETTGLPPR A+P  ++ YDSCRV+SIAWVLRD+ TVY+QRY+VT+PG   DE   IGAE +HGISR V+D YG  T ++L DF+ADV +++ IVAHNL+FD+SVV AELFRMG S+DAR +++  SLCTMKSTTNLVRI NSYGS+KWPKLEELH FLFGH FENAHHAMCDVDA+V CY+ L ++   +K
Sbjct:    1 MPELFFDVETTGLPPRKANPETFEQYDSCRVVSIAWVLRDEKTVYSQRYSVTDPGI-ADEN--IGAEFVHGISREVMDRYGNATKVVLSDFMADVDRSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFKSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHVFENAHHAMCDVDAMVKCYFTLLEKHTSSK 196          
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Match: A0A6H5J9I1_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9I1_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 5.170e-79
Identity = 126/197 (63.96%), Postives = 154/197 (78.17%), Query Frame = 0
Query:    4 LFFDVETTGLPPRGADPAKYQHYDSCRVISIAWVLRDQNTVYAQRYAVTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEIIVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRIKNSYGSFKWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDRFVVTKK 200
            + F  +TTGLPPR A P  ++ YDSCRV+SIAWVLRD+ TVYAQRY+V +PG   DE   IGAE +HGISR V+D YG   +++L DF+ADV +++ IVAHNL+FD+SVV AELFRMG S+DAR +L+  SLCTMKSTTNLVRI NS  S+KW KLEELH FLFG+ FENAHHAMCDVDA+V CY+ L ++    KK
Sbjct:  426 VVFQCQTTGLPPRKATPETFEQYDSCRVVSIAWVLRDKKTVYAQRYSVADPGI-ADEN--IGAEFVHGISREVMDKYGNAINVVLSDFMADVNRSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLLSFKSLCTMKSTTNLVRIPNSCESYKWLKLEELHEFLFGNAFENAHHAMCDVDAMVKCYFTLLEKHTANKK 619          
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Match: A0A1F3CPE3_9BACT (DNA polymerase III subunit epsilon n=4 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A1F3CPE3_9BACT)

HSP 1 Score: 128 bits (322), Expect = 5.720e-34
Identity = 72/196 (36.73%), Postives = 114/196 (58.16%), Query Frame = 0
Query:    4 LFFDVETTGLPPRGADPAKYQHYDSCRVISIAWVL--RDQNTVYAQRYAVTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEIIVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRIKNSYGSFKWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDRFVV 197
            LFFD ETTG+P R    +     +  R++ IAW++   D+  V  Q++ +   G    +EV      +HGI+     N GKD   +L  F   +++++ I+AHN+ FD+ +V AE FR   +     + N   LCTM ++TN  +I  +YG +KWPKL+ELH+ LFG  FE+AH+A  D++A   C+++LRD  ++
Sbjct:    3 LFFDTETTGVP-RNYKASVEDSNNWPRMVQIAWLVYNSDKIKVDEQQFIIKPEGYTIPKEVS----KLHGITTERAINEGKDLQFVLNLFNTQIEESQFIIAHNISFDEKIVGAEFFRKKINSK---LFNKPHLCTMHASTNYCKIPGNYG-YKWPKLQELHTKLFGSNFEDAHNAAADIEATAKCFWKLRDLHLI 189          
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Match: A0A2I0DBM9_9FLAO (3'-5' exonuclease n=1 Tax=Psychroflexus sp. MES1-P1E TaxID=2058320 RepID=A0A2I0DBM9_9FLAO)

HSP 1 Score: 125 bits (313), Expect = 1.250e-32
Identity = 74/195 (37.95%), Postives = 109/195 (55.90%), Query Frame = 0
Query:    4 LFFDVETTGLPPRGADPAKYQHYDSCRVISIAWVLRDQ-NTVYAQRYAVTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEIIVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRIKNSYGSFKWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDRFVV 197
            LFFD ETTGLP     P    + +  R+I I W+L D+ + +    + +     P +  +   A  IHGI+     + G D + +L+ F   ++++  IVAHN+ FDK ++ AEL R G   +  +   TT +CTMKS+TN  +I  +YG +KWP L ELH  LFG  FE AH A  D+DA   C++ L+ R V+
Sbjct:    3 LFFDTETTGLPKNWKAPVSDLN-NWPRMIQIGWILSDEGHRIDIGNFIIK----PENFTIPNEASKIHGITTEKAMSEGVDLNTLLQKFNGLIERSNCIVAHNINFDKMILGAELLRKGVISNFEY---TTKICTMKSSTNYCQIPGNYG-YKWPTLSELHIKLFGKDFEGAHDAFADIDATEKCFWELKKRRVI 188          
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Match: A0A7K4BDJ2_9EURY (3'-5' exonuclease n=1 Tax=Methanomicrobiales archaeon TaxID=2184052 RepID=A0A7K4BDJ2_9EURY)

HSP 1 Score: 125 bits (313), Expect = 2.330e-32
Identity = 75/210 (35.71%), Postives = 112/210 (53.33%), Query Frame = 0
Query:    1 MPELFFDVETTGLPPRGADPAKYQHYDSCRVISIAWVLRDQ---------NTVYAQRYAVTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEIIVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRIKNSYGSF--KWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDRFVVTK 199
            M  LF D ETTGLP R ADP  Y      R++ IAW+L D+         + +Y   Y + +              +IHGI+ +   N G+    +L +F A + ++E+I+ HN+EFD+ V+ AE  R   ++   H++  T  CTMK + +  +I    G    KWPKL ELH  LF   FE+AH+A+ DV A V CY+ L+ R ++T+
Sbjct:    1 MRYLFLDTETTGLPKRKADPILYPEIWP-RMVQIAWILCDEEEAILDEQSHIIYPDGYIIPDI-----------VANIHGITTTRAKNEGEPLIDVLSEFTAALHQSELIIGHNIEFDRGVIAAEYTR---TKQEAHIIKPTYFCTMKKSADYCKIPYPSGKKGNKWPKLSELHLTLFECPFEDAHNALADVKACVRCYFELKRRGMITE 195          
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Match: UPI001EFB5CFC (exonuclease domain-containing protein n=1 Tax=Tenacibaculum finnmarkense TaxID=2781243 RepID=UPI001EFB5CFC)

HSP 1 Score: 126 bits (316), Expect = 2.050e-31
Identity = 73/196 (37.24%), Postives = 109/196 (55.61%), Query Frame = 0
Query:    4 LFFDVETTGLPPRGADPAKYQHYDSCRVISIAWVLRDQN--TVYAQRYAVTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEIIVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRIKNSYGSFKWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDRFVV 197
            LFFD ETTG+P     PA     +  R++ +AW+L D+N   + +Q   +     P +  +   A +IHGI+       GKD   IL +F + +K+A +++AHN+ FD+ ++ AE FR   S     V      CTM+ +TN+ +I   YG FKWPKL+ELH FLF   F +AH A  D+ A   CY+ L+ R ++
Sbjct:  167 LFFDTETTGVPRNWKAPAS-DTKNWPRLVQLAWLLYDENGNIIESQNVIIK----PDNFIIPKEASNIHGITTEKAYADGKDLITILNEFESKIKEANLLIAHNISFDEKIMGAEFFRRNNSNPLTKVKK---FCTMEKSTNICKIDGHYG-FKWPKLQELHYFLFKENFIDAHDAKADIQATAKCYFELKRRNLI 353          
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Match: K2FS27_9BACT (Exonuclease domain-containing protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2FS27_9BACT)

HSP 1 Score: 118 bits (296), Expect = 5.180e-30
Identity = 69/196 (35.20%), Postives = 106/196 (54.08%), Query Frame = 0
Query:    4 LFFDVETTGLPPR-GADPAKYQHYDSCRVISIAWVLRDQN-TVYAQRYAVTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEIIVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRIKNSYGSFKWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDRFVV 197
            LFFD ET GLP   GA      ++   R++ +A+V+ D +  +   R  +  P      E+   A  +HG ++ +++  G      L  F++D++ A I++ HN++FDKS++ AEL R G              CTM+S+TN  RI    G +KWPKL+ELH  LFG  FE+AH A+ DV A   C++ L+   V+
Sbjct:    3 LFFDTETNGLPKNWGAHVHDVDNWP--RMLQLAYVICDDDGDLRMSRNLLIKPEG---FEINEDAAKVHGFTKEILEKKGISIIKALTTFLSDLQDANILIGHNIQFDKSILGAELIRAGMEAGYEDFAKLPRFCTMQSSTNFCRIDGPRG-YKWPKLQELHKHLFGAEFEDAHDALADVSATAKCFFELKKLNVI 192          
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Match: A0A847VPR8_9BACT (3'-5' exonuclease n=1 Tax=Candidatus Falkowbacteria bacterium TaxID=2053554 RepID=A0A847VPR8_9BACT)

HSP 1 Score: 117 bits (292), Expect = 1.900e-29
Identity = 70/197 (35.53%), Postives = 106/197 (53.81%), Query Frame = 0
Query:    4 LFFDVETTGLPPRGADPAK-YQHYDSCRVISIAWVLRDQ--NTVYAQRYAVTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEIIVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRIKNSYGSFKWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDRFVV 197
            L FD ETTGLP     P   + ++   R++ +AW L D   N   +  Y +   G    EE+      IH I+++     G +    L  F+ DVKKAE +V HN++FD+ +V +EL R+        +L    +CTMK++  L +I N +G +KWP L EL+ FLF  +F +AH A+ DV A   C++ L+ R V+
Sbjct:    3 LIFDTETTGLPKNYQAPLDDFSNWP--RIVQLAWSLYDAEGNHWESYNYIIKPNGFVIPEEIA----KIHRITQARALAEGVELRQALEHFIDDVKKAEYLVGHNIDFDEKIVGSELLRLQMENP---LLTANKICTMKASVQLCQIDNGHGGYKWPNLTELYQFLFQTSFPDAHDALVDVKACAECFFELKRRNVI 190          
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Match: A0A1V5SWK3_9EURY (DNA polymerase III subunit epsilon n=1 Tax=Euryarchaeota archaeon ADurb.Bin294 TaxID=1852878 RepID=A0A1V5SWK3_9EURY)

HSP 1 Score: 117 bits (293), Expect = 2.510e-29
Identity = 69/197 (35.03%), Postives = 102/197 (51.78%), Query Frame = 0
Query:    1 MPELFFDVETTGLPPRGADPAKYQHYDSCRVISIAWVLRDQNTVYAQR-YAVTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEIIVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRI--KNSYGSFKWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDR 194
            M  L FD E+TGLP    DP  Y  Y   R++ +AW+L D  T+  +  Y +   G      +   +  IHGI+       GK    +L  F   +K+A+++V HN+ FD+S+V +E  R   +     +L     CTMK++T + ++  K     +KWP L ELH FLF   FE+AH A  DV A + CY  L++R
Sbjct:    1 MKYLIFDTESTGLPREEKDPFHYPEYWP-RMVQLAWILTDGETIITEENYLIYPDGFV----IPSSSMEIHGITNERAREEGKQVLEVLSVFSESIKQADVLVGHNVSFDRSIVTSEYSRAKLNAP---ILKLPYHCTMKTSTEVCKLPAKGGRRGYKWPSLSELHQFLFEEPFEHAHDASADVRACMRCYLELKNR 189          
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Match: Q2FLJ5_METHJ (Exonuclease n=3 Tax=Euryarchaeota TaxID=28890 RepID=Q2FLJ5_METHJ)

HSP 1 Score: 117 bits (292), Expect = 3.540e-29
Identity = 69/197 (35.03%), Postives = 102/197 (51.78%), Query Frame = 0
Query:    1 MPELFFDVETTGLPPRGADPAKYQHYDSCRVISIAWVLRDQNTVYAQR-YAVTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEIIVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRI--KNSYGSFKWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDR 194
            M  L FD E+TGLP    DP  Y  Y   R++ +AW+L D  T+  +  Y +   G      +   +  IHGI+       GK    +L  F   +K+A+++V HN+ FD+S+V +E  R   +     +L     CTMK++T + ++  K     +KWP L ELH FLF   FE+AH A  DV A + CY  L++R
Sbjct:    1 MKYLIFDTESTGLPREEKDPFHYPEYWP-RMVQLAWILTDGETIITEENYLIYPDGFV----IPSSSMEIHGITNERAREEGKPVLEVLSVFSESIKQADVLVGHNVSFDRSIVTSEYSRAKLNAP---ILKLPYHCTMKTSTEVCKLPAKGGRRGYKWPSLSELHQFLFEEPFEHAHDASADVRACMRCYLELKNR 189          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNF3_ESV1K9.880e-9668.84EsV-1-126 n=2 Tax=root TaxID=1 RepID=Q8QNF3_ESV1K[more]
A0A6H5J9I1_9PHAE5.170e-7963.96Glutaredoxin domain-containing protein n=1 Tax=Ect... [more]
A0A1F3CPE3_9BACT5.720e-3436.73DNA polymerase III subunit epsilon n=4 Tax=unclass... [more]
A0A2I0DBM9_9FLAO1.250e-3237.953'-5' exonuclease n=1 Tax=Psychroflexus sp. MES1-P... [more]
A0A7K4BDJ2_9EURY2.330e-3235.713'-5' exonuclease n=1 Tax=Methanomicrobiales archa... [more]
UPI001EFB5CFC2.050e-3137.24exonuclease domain-containing protein n=1 Tax=Tena... [more]
K2FS27_9BACT5.180e-3035.20Exonuclease domain-containing protein n=1 Tax=uncu... [more]
A0A847VPR8_9BACT1.900e-2935.533'-5' exonuclease n=1 Tax=Candidatus Falkowbacteri... [more]
A0A1V5SWK3_9EURY2.510e-2935.03DNA polymerase III subunit epsilon n=1 Tax=Euryarc... [more]
Q2FLJ5_METHJ3.540e-2935.03Exonuclease n=3 Tax=Euryarchaeota TaxID=28890 RepI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 2..197
e-value: 9.9E-5
score: 27.8
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 4..186
e-value: 1.9E-7
score: 31.8
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 3..197
e-value: 2.1E-28
score: 101.5
NoneNo IPR availablePANTHERPTHR30231:SF24coord: 5..188
NoneNo IPR availablePANTHERPTHR30231DNA POLYMERASE III SUBUNIT EPSILONcoord: 5..188
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:1278533..1279135 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4882.1mRNA_P-fluviatile_contig22.4882.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig22 1278533..1279135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig22.4882.1 ID=prot_P-fluviatile_contig22.4882.1|Name=mRNA_P-fluviatile_contig22.4882.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=201bp
MPELFFDVETTGLPPRGADPAKYQHYDSCRVISIAWVLRDQNTVYAQRYA
VTNPGTPGDEEVEIGAESIHGISRSVVDNYGKDTSLILRDFVADVKKAEI
IVAHNLEFDKSVVCAELFRMGCSEDARHVLNTTSLCTMKSTTNLVRIKNS
YGSFKWPKLEELHSFLFGHTFENAHHAMCDVDALVACYYRLRDRFVVTKK
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf