prot_P-fluviatile_contig22.4785.1 (polypeptide) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Match: D7G710_ECTSI (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G710_ECTSI) HSP 1 Score: 135 bits (340), Expect = 2.500e-40 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0
Query: 1 MDTGYRSSKGVLITCDVPTKQFILSLDARLACVVSDLDATHIFVKTDSIKEIQRELDQLHEKNVYVRPRT 70
M TGYRSSKGVLITCDVPTKQFI+SLDARLACVVSDLDATH+FVK DS+KEIQREL+QLHEKNVYVRPRT
Sbjct: 1 MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT 70
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Match: A0A835ZC95_9STRA (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC95_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 5.610e-17 Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFILSLDARLA--CVVSDLDATHIFVKTDSIKEIQRELDQLHEKNVYVR 67
S KGVLITCDVPTKQFIL L+++ A +++DLD TH+FV+ ++ EI+ +L++L E NVYVR
Sbjct: 7 SRKGVLITCDVPTKQFILHLNSKQAQGFIINDLDETHLFVEASAVHEIREQLERLQEMNVYVR 69
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Match: A0A2V3IN38_9FLOR (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN38_9FLOR) HSP 1 Score: 61.2 bits (147), Expect = 1.940e-10 Identity = 27/62 (43.55%), Postives = 44/62 (70.97%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFILSLDARLA--CVVSDLDATHIFVKTDSIKEIQRELDQLHEKNVYV 66
++ GVLI+CD+P KQF+L +D + ++SDLD TH+ VK ++ I+ +LD+L+E+N Y
Sbjct: 50 ATAGVLISCDIPVKQFLLHVDEKDTGKFIISDLDETHVLVKESALDYIKSQLDKLYEENQYT 111
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Match: M2VWH3_GALSU (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VWH3_GALSU) HSP 1 Score: 59.3 bits (142), Expect = 3.780e-10 Identity = 29/63 (46.03%), Postives = 47/63 (74.60%), Query Frame = 0
Query: 9 KGVLITCDVPTKQFILSLDARLA---CVVSDLDATHIFVKTDSIKEIQRELDQLHEKNVYVRP 68
+GVLITCD+P KQFIL LD A V+++LD T +F+++ ++K +Q +L++L+E+N Y +P
Sbjct: 6 RGVLITCDIPMKQFILKLDEDQAPNRFVIANLDETSLFIQSWALKLVQEKLEELYEEN-YFQP 67
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Match: A0A383WPN6_TETOB (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WPN6_TETOB) HSP 1 Score: 58.2 bits (139), Expect = 1.220e-9 Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFILSLD-----ARLACVVSDLDATHIFVKTDSIKEIQRELDQLHEKNVYVRP 68
++ G L+TCDVPTK+F++ L+ + A ++ +LD TH+ VK D ++ +Q ++ + KNVY P
Sbjct: 4 ATSGALLTCDVPTKEFLVWLNNQNKATKRAFIIKELDDTHLLVKEDMVEFVQEQVKAFNNKNVYTPP 70
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Match: I0Z2U2_COCSC (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z2U2_COCSC) HSP 1 Score: 55.5 bits (132), Expect = 1.310e-8 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 0
Query: 9 KGVLITCDVPTKQFILSLD----ARLACVVSDLDATHIFVKTDSIKEIQRELDQLHEKNVYVRPR 69
+GVL+ CDVPTK+FILSL+ V+ DLD T +FV+ ++ +++ L + +E+N Y PR
Sbjct: 2 RGVLLQCDVPTKEFILSLNDSKPTNERFVILDLDDTRLFVQPTVVEWLEKRLKEFNEENTYQPPR 66
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Match: A0A6T6HXU1_9STRA (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HXU1_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 2.340e-8 Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFILSLDARLAC----VVSDLDATHIFVKTDSIKEIQRELDQLHEKNVY 65
+S G LITCDVPTKQ+I L+ A ++ DLDATH+ VK + EI+R ++ ++NV+
Sbjct: 36 ASAGYLITCDVPTKQYIQYLNEMKAVDKKFIIEDLDATHLLVKKKARAEIERRVESWMDENVF 98
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Match: A0A1X6PEZ7_PORUM (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEZ7_PORUM) HSP 1 Score: 53.5 bits (127), Expect = 7.190e-8 Identity = 26/62 (41.94%), Postives = 41/62 (66.13%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFILSLDARLA---CVVSDLDATHIFVKTDSIKEIQRELDQLHEKNVY 65
++ GVL+TCDVP KQF+L LD A +V+ LD TH+F+ ++ I+ +L++L +N Y
Sbjct: 4 ATHGVLVTCDVPVKQFLLKLDNDRAPDRFIVAKLDETHLFIHAWAVDMIKDQLERLFAENQY 65
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Match: A0A7R9C1N4_9CRUS (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9C1N4_9CRUS) HSP 1 Score: 52.0 bits (123), Expect = 3.200e-7 Identity = 22/55 (40.00%), Postives = 37/55 (67.27%), Query Frame = 0
Query: 8 SKGVLITCDVPTKQFILSLDARLAC----VVSDLDATHIFVKTDSIKEIQRELDQ 58
SKGVL+TCD P +QF++ LD + ++ DLD+TH+F+ D + E+ ++D+
Sbjct: 5 SKGVLVTCDPPMRQFLIWLDEKEKLGRKFILLDLDSTHLFISADVVNELMEKVDE 59
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Match: A4S7H4_OSTLU (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7H4_OSTLU) HSP 1 Score: 52.0 bits (123), Expect = 3.350e-7 Identity = 27/63 (42.86%), Postives = 37/63 (58.73%), Query Frame = 0
Query: 10 GVLITCDVPTKQFILSLD----ARLACVVSDLDATHIFVKTDSIKEIQRELDQLHEKNVYVRP 68
GV+IT DVP KQ+IL L+ A VV DLDA + V+ D++ I RE++ + YV P
Sbjct: 7 GVMITADVPIKQYILHLNDVAPAERKFVVVDLDARRVLVQPDAVDAIHREIEAFQQSTQYVAP 69 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-fluviatile_contig22.4785.1 ID=prot_P-fluviatile_contig22.4785.1|Name=mRNA_P-fluviatile_contig22.4785.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=71bpback to top |