prot_P-fluviatile_contig19.3617.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig19.3617.1
Unique Nameprot_P-fluviatile_contig19.3617.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length827
Homology
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Match: D8LSH2_ECTSI (Lissencephaly protein 1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH2_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 8.240e-25
Identity = 433/724 (59.81%), Postives = 459/724 (63.40%), Query Frame = 0
Query:  124 LPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRLKGHTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGLVMSWLSHLDYRLAGTGAARTRGGA-------TAAGFDDGMDVYDAGATRGPDVETMGSPLRR-----PQHQHQRTALGVRTTNTRQVCVDRQAALWGSLVAFSVPCIGWRSRREVLLRVMDGAARPGTEEFASVEHVLYLFFGLPSERISTLLRSGVARRTGTASSVESGAAAASRRRSGTMGYNTALEPSSINNRDAEAYNSRIAPAGRRGGGGYGAGAGDQRRQFSVEDLEDAHYCGGGSIDDEAAPAVREAAAALAAAPAIKTAAADWFAAGDYNVPEHRGAG--WAE--LEAAATGLAPAATRSTTELGGGTAAAATSE----DLFGSCGPAAAG--ARCARAGASA-----PGSERLEIGRRGEKHSGSVGERTLKGGSGVARGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQWKESAA 820
             PVDPELERTFRGRGAAVTGVSYSPDMKQLVSSA DNNLMVWTFRAQLRALRLKG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGLVMSW SHLD RLA  G                  GF++G                +    RR           RTALG RTTN R     R A   GS V       G   RR V                                       SG  RR  TA++                               A+     +A  G  G    GA A   + + S E L      GG   +   +      AAALAAAPAI+TAAADW +AG+    ++RG G  W +    A A G AP A  + +  G   + AA ++    D+FG  G AA G  A   R GA+A     PG   LE G  G   +G       +    V RGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQ  E  A
Sbjct:   42 FPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALRLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGLVMSWRSHLDNRLASVGXXXXXXXXXXXXXVRAPTGFEEGAIXXXXXXXXXXXXXXVKGVARRGGLAGSGGGQPRTALGTRTTNARVSTPGRPA---GSGV-------GGGERRPV---------------------------------------SGGRRRLETATAYP-----------------------------ADLEEDGVADDGVGGPAPVGAAA---KERDSYELL------GGRQSERPLSATAAAGAAALAAAPAIRTAAADWLSAGE---DDYRGGGAVWRDWTAPAPAVGAAPEAAGAISAPGSFRSGAAATKFSGGDMFG-LGEAALGGPAHGRRGGAAAAVRGAPGRGLLEGG--GVCGTGXXXXXAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQGERVA 672          
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Match: A0A6H5KSG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG1_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 3.140e-19
Identity = 99/210 (47.14%), Postives = 119/210 (56.67%), Query Frame = 0
Query:  629 SVEDLEDAHYCGGGSIDDEAAPAVREAA-AALAAAPAIKTAAADWFAAGDYNVPEHRG--AGWAE--LEAAATGLAPAATRSTTELGGGTAAAATSE----DLFGSCGPAAAGA----RCARAGASA---PGSERLEIGRRGEKHSGSVGERTLKGGSGVARGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQWKESAAAA 822
            + E   D++   GG   +    A   AA AALAAAPAI+T AADW +AG+    ++RG  A W +    A A G AP A  + +  G   + AA ++    D+FG  G AA G     R   AGA+A   PG   LE G  G   +G       +    V RGALPEALAGTLDHIVGQLDMLTRTVG+LEQRLTLTEDRLQ  E A  A
Sbjct:  453 AAEKERDSYALLGGRQSERPLSATAAAATAALAAAPAIRTGAADWLSAGE---DDYRGGAAVWRDWTAPAPAVGAAPEAAGAFSAPGSFRSGAAATKFSGGDMFG-LGEAALGGPAHGRRGEAGAAARGAPGRGLLEGG--GVYGTGGXXXGAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGLLEQRLTLTEDRLQQGERAGDA 656          
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Match: A0A3L6VRZ9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VRZ9_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.530e-9
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:  124 LPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRLKGH 179
             P+DP L+RTFRG  + V  +SY+P+M+QL S + D  +M+W F+ Q+RA R  GH
Sbjct:   32 FPMDPSLQRTFRGHKSGVECLSYNPNMRQLASGSLDCTVMIWNFKPQMRAFRFLGH 87          
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Match: A0A7S2CER6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CER6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.720e-8
Identity = 28/42 (66.67%), Postives = 36/42 (85.71%), Query Frame = 0
Query:  772 VARGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRL 813
            ++R  LPE L  TLDHIVGQLD++TRT+ +LEQR++LTEDRL
Sbjct:   64 ISRDMLPEVLTATLDHIVGQLDVVTRTMSILEQRVSLTEDRL 105          
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Match: UPI0007B7EE92 (POC1 centriolar protein homolog A-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B7EE92)

HSP 1 Score: 61.2 bits (147), Expect = 4.030e-8
Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 0
Query:  755 EKHSGSVGERTLKGGSGVARGA-----LPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQ 814
            E  +G V  +     + V+ GA     +P ALA TL HIVGQLD+LT+TV +LEQRLTLTED+L+
Sbjct:    1 ESRAGGVSSQKSSSTAPVSPGAGQPDSVPAALASTLQHIVGQLDVLTQTVAILEQRLTLTEDKLK 65          
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Match: A0A835Z3N7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.150e-7
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0
Query:  768 GGSGVARGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQ 814
            G  GV+R  LP  LAGTLDHIVGQLD++TRT+ +LEQRLTL ED+++
Sbjct:  442 GEGGVSRDELPAVLAGTLDHIVGQLDIVTRTLAILEQRLTLAEDKIE 488          
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Match: R1F002_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F002_EMIHU)

HSP 1 Score: 65.1 bits (157), Expect = 1.620e-7
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
Query:  125 PVDPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALR 175
            P+DP LER+FRG    V+ VS+SP MKQLVS   D  +MVW F+ Q+RA R
Sbjct:    6 PMDPALERSFRGHKDGVSSVSFSPTMKQLVSGGLDGTVMVWNFKMQMRAFR 56          
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Match: A0A3S0ZAS1_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZAS1_ELYCH)

HSP 1 Score: 65.9 bits (159), Expect = 1.770e-7
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0
Query:  127 DPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALR 175
            DP LER FRG    VT V +SP+M QL SS+ DNNLMVW F+A++RA R
Sbjct:    6 DPSLERHFRGHRDVVTAVDFSPNMTQLASSSLDNNLMVWNFKAKMRAYR 54          
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Match: UPI0007B952DC (POC1 centriolar protein homolog A n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=UPI0007B952DC)

HSP 1 Score: 60.5 bits (145), Expect = 2.050e-7
Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 0
Query:  755 EKHSGSVGERTLKGGSGVARGA-----LPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQ 814
            E  +G V  +     + V+ GA     +P ALA TL HIVGQLD+LT+TV +LEQRLTLTED+L+
Sbjct:   39 ESGAGGVSSQKSSSTAPVSPGAGQPDSVPAALASTLQHIVGQLDVLTQTVAILEQRLTLTEDKLK 103          
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Match: UPI001659BF5B (POC1 centriolar protein homolog A-like isoform X4 n=1 Tax=Halichoerus grypus TaxID=9711 RepID=UPI001659BF5B)

HSP 1 Score: 59.3 bits (142), Expect = 2.260e-7
Identity = 26/39 (66.67%), Postives = 35/39 (89.74%), Query Frame = 0
Query:  776 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQ 814
            ++P+ L  TL+HIVGQLD+LT+TV +LEQRLTLTED+L+
Sbjct:   31 SMPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLK 69          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSH2_ECTSI8.240e-2559.81Lissencephaly protein 1-like n=1 Tax=Ectocarpus si... [more]
A0A6H5KSG1_9PHAE3.140e-1947.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3L6VRZ9_9STRA1.530e-948.21Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A7S2CER6_9STRA3.720e-866.67Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
UPI0007B7EE924.030e-852.31POC1 centriolar protein homolog A-like n=1 Tax=Sin... [more]
A0A835Z3N7_9STRA1.150e-765.96WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
R1F002_EMIHU1.620e-756.86Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A3S0ZAS1_ELYCH1.770e-761.22Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
UPI0007B952DC2.050e-752.31POC1 centriolar protein homolog A n=1 Tax=Sinocycl... [more]
UPI001659BF5B2.260e-766.67POC1 centriolar protein homolog A-like isoform X4 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 237..251
score: 37.5
coord: 321..335
score: 37.93
coord: 363..377
score: 38.08
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 253..292
e-value: 1.8E-10
score: 50.8
coord: 211..250
e-value: 2.2E-7
score: 40.5
coord: 295..334
e-value: 1.2E-9
score: 48.0
coord: 169..208
e-value: 1.4E-6
score: 37.8
coord: 337..376
e-value: 1.9E-9
score: 47.4
coord: 379..418
e-value: 8.8E-8
score: 41.9
coord: 127..166
e-value: 4.2E-5
score: 33.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 131..165
e-value: 0.016
score: 16.1
coord: 257..292
e-value: 3.2E-9
score: 37.2
coord: 339..376
e-value: 2.7E-7
score: 31.2
coord: 176..207
e-value: 2.3E-6
score: 28.2
coord: 380..417
e-value: 4.6E-6
score: 27.3
coord: 297..334
e-value: 1.1E-6
score: 29.2
coord: 216..250
e-value: 2.7E-7
score: 31.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 386..417
score: 12.246
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 302..343
score: 13.884
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 176..207
score: 14.819
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 260..301
score: 15.755
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 134..168
score: 11.645
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 344..385
score: 17.526
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 218..259
score: 15.254
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 125..253
e-value: 2.2E-35
score: 123.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 254..338
e-value: 2.9E-29
score: 104.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 339..422
e-value: 8.4E-26
score: 93.1
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 775..814
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 775..814
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 124..422
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 124..422
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.453
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 321..335
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 363..377
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 279..293
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 134..417
score: 74.348
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 126..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig19contigP-fluviatile_contig19:2267862..2274837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig19.3617.1mRNA_P-fluviatile_contig19.3617.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig19 2267862..2274837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig19.3617.1 ID=prot_P-fluviatile_contig19.3617.1|Name=mRNA_P-fluviatile_contig19.3617.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=827bp
LGGLVFYTCLRGLVYGVPLVNTPEYSKTSTMPPCRRFVRVRVFSKGGALE
RRETMTSRSSTFGGGRRSDRMGRSSHGRFSGLDQATTRSDPAPRRGGGSP
PLSTASTSRGRATKSAAAGPRAALPVDPELERTFRGRGAAVTGVSYSPDM
KQLVSSAADNNLMVWTFRAQLRALRLKGHTAIVHHAEFSPDGSVVASASK
DRTVRLWAPSARGGSTVLKGHMGGVRHASFSRNGRLLITASDDKTVKIWS
LPSQRFVCTLSGHNNWVRCATFSPDSRLATSCGDDKTVRLWDVQAQSCLR
VLFDHNGSVGQARFHPDGTCVAACSADRTIKVWDARSHQLLQHYPAHDGE
VTSISFHESGNFLLSSSTDASLKIWDLREGRLVYTLKGHAGPVTACTFSA
DGTRFASGGEDGLVMSWLSHLDYRLAGTGAARTRGGATAAGFDDGMDVYD
AGATRGPDVETMGSPLRRPQHQHQRTALGVRTTNTRQVCVDRQAALWGSL
VAFSVPCIGWRSRREVLLRVMDGAARPGTEEFASVEHVLYLFFGLPSERI
STLLRSGVARRTGTASSVESGAAAASRRRSGTMGYNTALEPSSINNRDAE
AYNSRIAPAGRRGGGGYGAGAGDQRRQFSVEDLEDAHYCGGGSIDDEAAP
AVREAAAALAAAPAIKTAAADWFAAGDYNVPEHRGAGWAELEAAATGLAP
AATRSTTELGGGTAAAATSEDLFGSCGPAAAGARCARAGASAPGSERLEI
GRRGEKHSGSVGERTLKGGSGVARGALPEALAGTLDHIVGQLDMLTRTVG
VLEQRLTLTEDRLQWKESAAAAPARV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf