prot_P-fluviatile_contig18.3233.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig18.3233.1
Unique Nameprot_P-fluviatile_contig18.3233.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length437
Homology
BLAST of mRNA_P-fluviatile_contig18.3233.1 vs. uniprot
Match: D8LF43_ECTSI (RPA_interact_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF43_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 6.250e-77
Identity = 128/180 (71.11%), Postives = 143/180 (79.44%), Query Frame = 0
Query:  259 EEDGLGWGDDG-SEDYCDEYRLLSPEEYLEMMEYIEEACREEDRKAEAEILEHYETMKRLEEEEIEHAVSSGLDGPEGNGQA-GVLCPVCKSDYLLEAGAPSSSIVCACGFRLDTGGDRLGLEHLRQQLADTYGQHRQDSVAVGFCAACSAEPRFVVEGAPGLDVLWSSCDGCGFARVVI 436
            +ED LGWGD G +ED CDE  LLSP+EYLEMM+YIEEAC+EED +AEA +LE YE  +RLEEEE+E+AV+S LD   GNGQ   VLCPVCK DYLL  G PS+SIVCACGFRLDTGGDRLGLEH +QQLADTY +H           ACSAEP FVVEGAPG DVLWSSCDGCGFARVV+
Sbjct:    3 DEDELGWGDGGGAEDDCDEEHLLSPDEYLEMMQYIEEACKEEDFRAEAAVLEDYELTRRLEEEEVEYAVAS-LDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEHFKQQLADTYSEHS---------TACSAEPSFVVEGAPGFDVLWSSCDGCGFARVVL 172          
BLAST of mRNA_P-fluviatile_contig18.3233.1 vs. uniprot
Match: A0A6H5KTE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE2_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 4.200e-49
Identity = 147/314 (46.82%), Postives = 170/314 (54.14%), Query Frame = 0
Query:    8 RRRRDIKMQDREKSLSPLDKDDLKLRCLERVRTERSRLMARMRCRR-IEQGVNQTFVHSASGDAGTGTDLPLGTTALQGA-------YSLS-ARDILRQGLSELSGGNSRAWSRHRGSEQQHLDHKQALPTEPFLQQ--DFESNPERVDSIDTGAQRGRDHLPQPPQSLSSSLFLSAIEEENATYLNACASGQGSPQQPRPPAGSRRHAPALEPTSTSVREDCQKFV-GSVDGDELMSEDGDSREEELVSRQRPKRHQQPQEK---EEDGLGWGDDG-SEDYCDEYRLLSPEEYLEMMEYIEEACREEDRKAEA 305
            RRRRD+K  DREKS+SPLDKD LK RCLERVRTERSRLMARMR R+  E+   Q F H A G++G+    PL   A QG        +SLS AR+ILR+GLSELSGGN     R R         + AL  E F       +SN                          S  FLSAIEEENA+YLNACA GQG   Q R P      A  L P S S RE  Q FV G+ D D+ +    D   +                    +ED LGWGD G +ED CDE  LLSP+EYLEMM+YIEEAC+EED +AEA
Sbjct:    7 RRRRDVKSLDREKSMSPLDKDQLKRRCLERVRTERSRLMARMRGRKGTEEEARQLFGH-AGGNSGS----PLTAAAAQGENLSSPGHHSLSSAREILREGLSELSGGNGDTNKRRRQQHHPTNHERTALGCEEFGASLTRLDSNGXXXXXXXXXXXXXXXXXXXHAGGSESLSFLSAIEEENASYLNACARGQGGSLQQRGPRDGT--AAELAPMSISFREQTQGFVEGNNDEDDALMAHDDGHAQXXXXXXXXXXXXXXXXXXMVDEDELGWGDGGGAEDCCDEENLLSPDEYLEMMQYIEEACKEEDLRAEA 313          
BLAST of mRNA_P-fluviatile_contig18.3233.1 vs. uniprot
Match: A0A835YX80_9STRA (Replication protein A interacting C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX80_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.400e-17
Identity = 58/166 (34.94%), Postives = 81/166 (48.80%), Query Frame = 0
Query:  278 RLLSPEEYLEMMEYIEEACREEDRKAEAEILEHYETMKRLEEEEIEHAVSSGL-----DGPEGNGQAG--VLCPVCKSDYLLEAGAPSSSIVCACGFRLDTGGDRLGLEHLRQQLADTYGQHRQDSVAVGFCAACSAEPRFVVEGAPGLDVLWSSCDGCGFARVVI 436
            R L+PEEY +MM +IE+A   E  +A+A                      + L     +  +G G     VLCPVCK  +LL+ GA   +I+C CGFRL T G+ + L  LRQ LA+ +  HR+          C  +P F V    G  +LWS C  CGF ++V+
Sbjct:    3 RKLTPEEYTDMMLFIEQALAAELARADASXXXXXXXXXXXXXXXXXXXXXAALARAAAEAEDGRGWRDDEVLCPVCKGGWLLQHGA---TIMCTCGFRLQTDGEGMQLGVLRQALAEVFTDHRE---------RCHLQPTFRVREEFGAAMLWSECSACGFEQIVL 156          
BLAST of mRNA_P-fluviatile_contig18.3233.1 vs. uniprot
Match: A0A7S0VBY7_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VBY7_9CRYP)

HSP 1 Score: 66.2 bits (160), Expect = 3.450e-9
Identity = 49/158 (31.01%), Postives = 74/158 (46.84%), Query Frame = 0
Query:  280 LSPEEYLEMMEYIEEACREEDRKAEAEILEHYETMKRLEEEEIEHAVSSGLDGPEGNGQAGVLCPVCKSDYLLEAGAPSSSIVCACGFRLDTGGDRLGLEHLRQQLADTYGQHRQDSVAVGFCAACSAEPRFVVEGAPG-LDVLWSSCDGCGFARVVI 436
            LS EEY+ +M+Y+EEA   E RK E EI+      +  ++E  E   S+ L      G   V CPVC  D L    +  + + C CG RL    +++ L  L   L D +  H          + C+ +P   ++  PG +D+L  +C  C F  VV+
Sbjct:   35 LSEEEYIGLMQYLEEAVVTELRKQEQEII----AQELFDQERAE---SNALAASHAEGHR-VTCPVCMRDTLH---SHRNVVFCGCGMRLSCQTEQVSLVQLESMLLDRFAAHTS--------SGCANQPVCSIQTVPGGVDMLMMACAACDFMDVVV 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LF43_ECTSI6.250e-7771.11RPA_interact_C domain-containing protein n=1 Tax=E... [more]
A0A6H5KTE2_9PHAE4.200e-4946.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YX80_9STRA8.400e-1734.94Replication protein A interacting C-terminal-domai... [more]
A0A7S0VBY7_9CRYP3.450e-931.01Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 300..320
NoneNo IPR availablePRODOMPD472859coord: 297..436
e-value: 0.001
score: 102.0
IPR028159RPA-interacting protein, C-terminal domainPFAMPF14768RPA_interact_Ccoord: 342..433
e-value: 3.4E-17
score: 62.8
IPR028156RPA-interacting proteinPANTHERPTHR31742FAMILY NOT NAMEDcoord: 242..436
coord: 16..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:1331481..1334076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3233.1mRNA_P-fluviatile_contig18.3233.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig18 1331426..1334688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig18.3233.1 ID=prot_P-fluviatile_contig18.3233.1|Name=mRNA_P-fluviatile_contig18.3233.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=437bp
MASVERRRRRRDIKMQDREKSLSPLDKDDLKLRCLERVRTERSRLMARMR
CRRIEQGVNQTFVHSASGDAGTGTDLPLGTTALQGAYSLSARDILRQGLS
ELSGGNSRAWSRHRGSEQQHLDHKQALPTEPFLQQDFESNPERVDSIDTG
AQRGRDHLPQPPQSLSSSLFLSAIEEENATYLNACASGQGSPQQPRPPAG
SRRHAPALEPTSTSVREDCQKFVGSVDGDELMSEDGDSREEELVSRQRPK
RHQQPQEKEEDGLGWGDDGSEDYCDEYRLLSPEEYLEMMEYIEEACREED
RKAEAEILEHYETMKRLEEEEIEHAVSSGLDGPEGNGQAGVLCPVCKSDY
LLEAGAPSSSIVCACGFRLDTGGDRLGLEHLRQQLADTYGQHRQDSVAVG
FCAACSAEPRFVVEGAPGLDVLWSSCDGCGFARVVI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028159RPA_interact_C_dom
IPR028156RIP