prot_P-fluviatile_contig15.2396.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig15.2396.1
Unique Nameprot_P-fluviatile_contig15.2396.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length109
Homology
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Match: D7G5N9_ECTSI (DNA-directed RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N9_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 4.720e-78
Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 0
Query:    1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPTDKITRKIVLKKKAVDDIMGGEDAWANVDKTQTTCPFCNNKEAFFMMVQLRSADEPMTCFYKCTKCKQRWKE 108
            MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEP+DKITRKI LKKKAVDDIMGG+DAWANVDKTQTTCPFCNNKEAFF+MVQLRSADEPMTCFYKCT CKQRWKE
Sbjct:    1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIALKKKAVDDIMGGDDAWANVDKTQTTCPFCNNKEAFFLMVQLRSADEPMTCFYKCTNCKQRWKE 108          
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Match: A0A836CB68_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB68_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.490e-41
Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = 0
Query:    1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPTDKITRKIVLKKKAVDDIMGGEDAWANVDKTQTTCPFCNN----KEAFFMMVQLRSADEPMTCFYKCTKCKQRWKE 108
            MLFCPT G+LLMVE+  +G  RF CQTCPY+HP+    K+T+ + L++K VDD++GG DAW NVDK    C  C +    KEA+F   QLRSADEPMT FYKC  C  RW E
Sbjct:    1 MLFCPTCGNLLMVEAATRGGQRFACQTCPYVHPLGQGGKVTKALTLQRKEVDDVLGGADAWVNVDKAPVACADCKDPGKGKEAYFFQAQLRSADEPMTVFYKCVDCGFRWNE 112          
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Match: A0A024UTD8_9STRA (DNA-directed RNA polymerase subunit n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UTD8_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.550e-41
Identity = 61/108 (56.48%), Postives = 81/108 (75.00%), Query Frame = 0
Query:    1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPTDKITRKIVLKKKAVDDIMGGEDAWANVDKTQTTCPFCNNKEAFFMMVQLRSADEPMTCFYKCTKCKQRWKE 108
            M FCPT G+LLMVE    G  RFCCQTCPYI+ +    K+  K+ L++K VDD++GG++AW NVD+T T CPFC + +A+FM +Q+RSADEP T FYKCT CK++W +
Sbjct:    1 MHFCPTCGNLLMVEPDSDGM-RFCCQTCPYIYKIN--QKVETKVPLQRKKVDDVLGGDEAWENVDQTDTRCPFCEHTKAYFMQIQIRSADEPSTTFYKCTGCKKQWND 105          
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Match: W7TK62_9STRA (DNA-directed RNA polymerase subunit n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK62_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.020e-40
Identity = 63/106 (59.43%), Postives = 80/106 (75.47%), Query Frame = 0
Query:    1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPTDKITRKIVLKKKAVDDIMGGEDAWANVDKTQTTCPFCNNKEAFFMMVQLRSADEPMTCFYKCTKCKQRW 106
            M FCP   +LL+VE G Q + RFCCQTCPYI  +  T KI++ + LK+K VDD++GGEDAWA  D+T T CPFC++ EAFF+ +Q+RSADEPMT FY+CT C  RW
Sbjct:    1 MKFCPICSNLLLVELGEQNF-RFCCQTCPYISVI--TKKISKTMKLKRKEVDDVLGGEDAWAAADRTTTACPFCDSMEAFFVQMQIRSADEPMTTFYRCTLCANRW 103          
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Match: A0A7S0RJ62_9CHLO (DNA-directed RNA polymerase subunit n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RJ62_9CHLO)

HSP 1 Score: 135 bits (339), Expect = 4.970e-39
Identity = 60/108 (55.56%), Postives = 81/108 (75.00%), Query Frame = 0
Query:    1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPTDKITRKIVLKKKAVDDIMGGEDAWANVDKTQTTCPFCNNKEAFFMMVQLRSADEPMTCFYKCTKCKQRWKE 108
            M FCPT G+LLMVE       R+ CQTCPY++ ++   KI ++ VL+ K VDD++GG++AWANVD+T+ +CP C++ +A+FM VQ RSADEPMT FYKC KC  RWK+
Sbjct:    2 MTFCPTCGTLLMVEYCELTRLRYACQTCPYVYMIDR--KIVKEHVLETKEVDDVLGGDEAWANVDRTEVSCPKCDHGQAYFMQVQTRSADEPMTIFYKCCKCANRWKD 107          
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Match: A0A058ZBP1_FONAL (DNA-directed RNA polymerase subunit n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZBP1_FONAL)

HSP 1 Score: 135 bits (339), Expect = 5.280e-39
Identity = 59/110 (53.64%), Postives = 82/110 (74.55%), Query Frame = 0
Query:    1 MLFCPTDGSLLMVESGPQ--GWTRFCCQTCPYIHPMEPTDKITRKIVLKKKAVDDIMGGEDAWANVDKTQTTCPFCNNKEAFFMMVQLRSADEPMTCFYKCTKCKQRWKE 108
            MLFCP  G++L+V S     G  +F CQTCPY+H ++   KI+ +I+LK+K VDD++GGE +W NVD T+  CP C+N+ A+FM +Q+RSADEPM+ FYKCTKC  +W+E
Sbjct:    1 MLFCPGCGNVLLVNSDASDIGDFQFACQTCPYVHSIKR--KISSRIILKRKEVDDVLGGEGSWDNVDSTEVPCPKCDNRRAYFMQIQIRSADEPMSTFYKCTKCAAQWRE 108          
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Match: A0A1Y1IMC9_KLENI (DNA-directed RNA polymerase subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMC9_KLENI)

HSP 1 Score: 131 bits (330), Expect = 1.240e-37
Identity = 59/110 (53.64%), Postives = 79/110 (71.82%), Query Frame = 0
Query:    1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPTDKITRKIVLKKKAVDDIMGGEDAWANVDKTQTTCPFCNNKEAFFMMVQLRSADEPMTCFYKCTK--CKQRWKE 108
            M FCPT  +LL+VE G  G  R+ CQTCPY++ ++   K+  K+ L +K VDD++GGE+AW NVDKT+ TCP C   EA+FM +Q+RSADEPM+ FYKC K  C  +W+E
Sbjct:    1 MDFCPTCANLLLVEGGNMGELRYFCQTCPYVYTIKA--KMKNKLPLARKEVDDVLGGEEAWRNVDKTEATCPKCRYGEAYFMQIQIRSADEPMSTFYKCCKPECSHQWRE 108          
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Match: A0A7S0PIB0_CAFRO (DNA-directed RNA polymerase subunit n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PIB0_CAFRO)

HSP 1 Score: 131 bits (329), Expect = 2.370e-37
Identity = 58/108 (53.70%), Postives = 76/108 (70.37%), Query Frame = 0
Query:    1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPTDKITRKIVLKKKAVDDIMGGEDAWANVDKTQTTCPFCNNKEAFFMMVQLRSADEPMTCFYKCTKCKQRWKE 108
            MLFCPT G++L++E G    T+F C TCPYI  +  T KIT+ I L++K VDD++GG  AW NVD+T   CP C ++ A+FM +Q+RSADEPMT FYKC  C  RW +
Sbjct:   16 MLFCPTCGNMLLIEGG--AGTKFFCTTCPYIQRV--TTKITKSITLERKTVDDVLGGAAAWENVDQTDALCPACGHRRAYFMQLQIRSADEPMTTFYKCVACSGRWND 119          
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Match: A0A316U707_9BASI (DNA-directed RNA polymerase subunit n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316U707_9BASI)

HSP 1 Score: 130 bits (327), Expect = 3.540e-37
Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 0
Query:    1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPTDKITRKIVLKKKAVDDIMGGEDAWANVDKTQTTCPFCNNKEAFFMMVQLRSADEPMTCFYKCT--KCKQRWKE 108
            MLFCPT  ++L++     G   + C TCPY  P+  T +IT++  L++K VDD+MGGED+W NVD T T CP C N  AFFM +Q+RSADEPMT FY+CT  KC  +WKE
Sbjct:    1 MLFCPTCANILLIGHDDSGRNEWVCPTCPYHFPI--TKQITKRTQLRRKEVDDVMGGEDSWKNVDSTDTPCPKCENPRAFFMQLQIRSADEPMTTFYRCTDAKCANQWKE 108          
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Match: A0A077ZVQ1_STYLE (DNA-directed RNA polymerase subunit n=2 Tax=Oxytrichidae TaxID=57506 RepID=A0A077ZVQ1_STYLE)

HSP 1 Score: 130 bits (326), Expect = 4.600e-37
Identity = 56/108 (51.85%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPTDKITRKIVLKKKAVDDIMGGEDAWANVDKTQTTCPFCNNKEAFFMMVQLRSADEPMTCFYKCTKCKQRWKE 108
            MLFCPT  +LL++E     + RF C+TCPY+  +E      +K+ L++K VDD++GG++AW NVD+ +  CP CNNK A+FM +Q+RSADEPMT FYKCT+C  +W+E
Sbjct:    1 MLFCPTCANLLLIEKTHSDF-RFFCKTCPYVFVVE--QNFEKKMQLERKEVDDVLGGKEAWENVDQIEAQCPKCNNKRAYFMQIQIRSADEPMTTFYKCTQCSYQWRE 105          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5N9_ECTSI4.720e-7895.37DNA-directed RNA polymerase subunit n=2 Tax=Ectoca... [more]
A0A836CB68_9STRA1.490e-4156.25DNA-directed RNA polymerase subunit n=1 Tax=Tribon... [more]
A0A024UTD8_9STRA3.550e-4156.48DNA-directed RNA polymerase subunit n=8 Tax=Saprol... [more]
W7TK62_9STRA1.020e-4059.43DNA-directed RNA polymerase subunit n=2 Tax=Nannoc... [more]
A0A7S0RJ62_9CHLO4.970e-3955.56DNA-directed RNA polymerase subunit n=1 Tax=Pyrami... [more]
A0A058ZBP1_FONAL5.280e-3953.64DNA-directed RNA polymerase subunit n=1 Tax=Fontic... [more]
A0A1Y1IMC9_KLENI1.240e-3753.64DNA-directed RNA polymerase subunit n=1 Tax=Klebso... [more]
A0A7S0PIB0_CAFRO2.370e-3753.70DNA-directed RNA polymerase subunit n=2 Tax=Cafete... [more]
A0A316U707_9BASI3.540e-3753.64DNA-directed RNA polymerase subunit n=1 Tax=Pseudo... [more]
A0A077ZVQ1_STYLE4.600e-3751.85DNA-directed RNA polymerase subunit n=2 Tax=Oxytri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001222Zinc finger, TFIIS-typeSMARTSM00440Cys4_2coord: 69..108
e-value: 6.6E-19
score: 78.8
IPR001222Zinc finger, TFIIS-typePFAMPF01096TFIIS_Ccoord: 70..107
e-value: 4.6E-18
score: 64.8
IPR001222Zinc finger, TFIIS-typePROSITEPS00466ZF_TFIIS_1coord: 71..106
IPR001222Zinc finger, TFIIS-typePROSITEPS51133ZF_TFIIS_2coord: 67..107
score: 14.161
IPR001529DNA-directed RNA polymerase, M/15kDa subunitSMARTSM00661rpol9cneucoord: 2..54
e-value: 1.4E-4
score: 31.3
IPR001529DNA-directed RNA polymerase, M/15kDa subunitPFAMPF02150RNA_POL_M_15KDcoord: 1..35
e-value: 1.1E-6
score: 28.4
IPR012164DNA-directed RNA polymerase subunit/transcription factor SPIRSFPIRSF005586RNApol_RpoMcoord: 1..108
e-value: 5.5E-29
score: 98.9
NoneNo IPR availableGENE3D2.20.25.10coord: 57..108
e-value: 1.3E-20
score: 74.4
NoneNo IPR availablePANTHERPTHR11239:SF12DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10coord: 1..107
NoneNo IPR availablePANTHERPTHR11239DNA-DIRECTED RNA POLYMERASEcoord: 1..107
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 48..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:649182..660020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2396.1mRNA_P-fluviatile_contig15.2396.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig15 649182..661272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig15.2396.1 ID=prot_P-fluviatile_contig15.2396.1|Name=mRNA_P-fluviatile_contig15.2396.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=109bp
MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPTDKITRKIVLKKKA
VDDIMGGEDAWANVDKTQTTCPFCNNKEAFFMMVQLRSADEPMTCFYKCT
KCKQRWKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001222Znf_TFIIS
IPR001529DNA-dir_RNA_pol_M/15kDasu
IPR012164Rpa12/Rpb9/Rpc10/TFS