prot_P-fluviatile_contig15.2373.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig15.2373.1
Unique Nameprot_P-fluviatile_contig15.2373.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length219
Homology
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BLAST of mRNA_P-fluviatile_contig15.2373.1 vs. uniprot
Match: A0A6H5KV47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV47_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 4.450e-84
Identity = 125/203 (61.58%), Postives = 159/203 (78.33%), Query Frame = 0 
Query:    5 DSGVPSLVRPKDAAISCSHFWANALLLAGISLFIVGTIIFVEWKGIGSFWVGASAAATGVAGIYVTQSQASGGVATGFYIFLSAVTLVAALVSLVLGDGLAWVVVRDTEGNCSNGNDCPASFCAADSCVCWAPDATQRCSEAGSRRYCMRYGGSSCSDIKDSQGILLGSFILLVLIALFSAFSLMVSISTCCYCKRTFVITDN 207
            DSG   +VRPK AAISCSH WANAL++ G+S  +VG IIF EWKG+GSFWVGA A A G +GIYVTQ +ASGG+AT FY  LS VTL A++VS+ LG+G  +++VRD  GNC +G+DCP+ FC  D+CVCW PD T  CS+AGS RYC+ +GG SCSDIKDS+ +LLGSFI+LV+IA  S +SL+V+++TC YCKRT V+  +
Sbjct:   15 DSGA-GMVRPKHAAISCSHLWANALVVVGLSSVVVGVIIFTEWKGMGSFWVGAVAMAAGTSGIYVTQGEASGGLATVFYALLSLVTLAASVVSIFLGEGATFLIVRDVNGNCRDGDDCPSDFCPEDACVCWEPDGTDVCSDAGSVRYCVPFGGDSCSDIKDSENLLLGSFIILVIIAFCSFWSLVVAVNTCWYCKRTIVVESS 216
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KV47_9PHAE4.450e-8461.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..192
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..218
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..45
NoneNo IPR availableTMHMMTMhelixcoord: 23..45
NoneNo IPR availableTMHMMTMhelixcoord: 50..69
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 168..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:307733..312597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2373.1mRNA_P-fluviatile_contig15.2373.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig15 306632..313957 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig15.2373.1 ID=prot_P-fluviatile_contig15.2373.1|Name=mRNA_P-fluviatile_contig15.2373.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=219bp
MAGSDSGVPSLVRPKDAAISCSHFWANALLLAGISLFIVGTIIFVEWKGI
GSFWVGASAAATGVAGIYVTQSQASGGVATGFYIFLSAVTLVAALVSLVL
GDGLAWVVVRDTEGNCSNGNDCPASFCAADSCVCWAPDATQRCSEAGSRR
YCMRYGGSSCSDIKDSQGILLGSFILLVLIALFSAFSLMVSISTCCYCKR
TFVITDNATTEAPPAAFR*
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