prot_P-fluviatile_contig14.2341.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.2341.1
Unique Nameprot_P-fluviatile_contig14.2341.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length235
Homology
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BLAST of mRNA_P-fluviatile_contig14.2341.1 vs. uniprot
Match: D8LF89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF89_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 1.710e-64
Identity = 145/257 (56.42%), Postives = 166/257 (64.59%), Query Frame = 0 
Query:    1 AAPTPPTPPVVRILACGGTYIPGPHRPMLRIVDVETKPRADAV--RQGAAAADGGFGPDHADLCAGGGRRSEYDDD-----------------GERKAAKEAGMMMCVAISSAGAGGRGILVTGCYDKGVRMLHNVLSSDRDDGGCNPPPRPLRXXXXXXXXXXXXXXXXXXXXXXVTMRMLGRHREGVRSVAISADGRWAVSGDRGGTIKVWEIPQEAPPSGKEAPRE---GALAEFEAHRGTVFALCMSPDARTV 235
            ++P P  PPVVRILACGGT++P P +PMLR VDV T   A A   + G   AD    P  +DLCA    RSE D +                 G   A KEAG+M CVAIS+AGA GRGILVTG YDKGVR+LHNVL  DR+    NPP              XXXXXXXXXXXXXVTMRMLGRH EGVR+VAISADGRWAV+GDR G +KVWE+P+E PP     P      A AEFEAH+G V++LCMSPDART+
Sbjct:   21 SSPAPVVPPVVRILACGGTFLPAPAKPMLRRVDVRTAAPAGAGADQAGGEEADVVSRPVRSDLCAAAAGRSERDGENXXXXXXXXXXXXXXRGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVLCPDRE----NPP--------------XXXXXXXXXXXXXVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGLVKVWEVPRETPPGADREPSSPDGAAEAEFEAHKGYVYSLCMSPDARTL 259
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BLAST of mRNA_P-fluviatile_contig14.2341.1 vs. uniprot
Match: A0A6H5L7H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7H8_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 2.360e-60
Identity = 140/259 (54.05%), Postives = 161/259 (62.16%), Query Frame = 0 
Query:    1 AAPTPPTPPVVRILACGGTYIPGPHRPMLRIVDVETKPRADAVRQ-GAAAADGGFGPDHADLCAGGGRRSEYDDD--------------------GERKAAKEAGMMMCVAISSAGAGGRGILVTGCYDKGVRMLHNVLSSDRDDGGCNPPPRPLRXXXXXXXXXXXXXXXXXXXXXXVTMRMLGRHREGVRSVAISADGRWAVSGDRGGTIKVWEIPQEAPPSGKEAP--REGAL-AEFEAHRGTVFALCMSPDARTV 235
            ++P P  P VVRILACGGT++P P +PMLR VDV T   A    Q G   AD    P  +DLCA    RSE + +                    G   A KEAG+M CVAIS+AGA GRGILVTG YDKGVR+LHNVL  DR+    NPP                  XXXXXXX  VTMRMLGRH EGVR+VAISADGRWAV+GDR G +KVWE+P+EAPP     P   +GA  AEFEAH+G V++LCMSPDARTV
Sbjct:  218 SSPAPVVPSVVRILACGGTFLPAPAKPMLRRVDVRTAAAAARADQAGGEEADVVSRPARSDLCAAAAGRSERNGENXXXXXXXXXXXXXXXDARGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVLCPDRE----NPP---------------SSSXXXXXXXPPVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGIVKVWEVPREAPPGADREPLSSDGAAEAEFEAHKGYVYSLCMSPDARTV 457
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF89_ECTSI1.710e-6456.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7H8_9PHAE2.360e-6054.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 156..195
e-value: 4.6E-5
score: 32.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 161..194
e-value: 3.2E-5
score: 24.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 163..196
score: 11.377
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 28..235
e-value: 2.4E-15
score: 58.2
NoneNo IPR availablePANTHERPTHR42968:SF10IP10415Pcoord: 153..235
NoneNo IPR availablePANTHERPTHR42968FAMILY NOT NAMEDcoord: 153..235
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 163..235
score: 11.313
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 88..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:3092879..3093583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2341.1mRNA_P-fluviatile_contig14.2341.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 3092879..3093583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.2341.1 ID=prot_P-fluviatile_contig14.2341.1|Name=mRNA_P-fluviatile_contig14.2341.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=235bp
AAPTPPTPPVVRILACGGTYIPGPHRPMLRIVDVETKPRADAVRQGAAAA
DGGFGPDHADLCAGGGRRSEYDDDGERKAAKEAGMMMCVAISSAGAGGRG
ILVTGCYDKGVRMLHNVLSSDRDDGGCNPPPRPLRSASSPPSGQQNEKAA
AAAAPPPVTMRMLGRHREGVRSVAISADGRWAVSGDRGGTIKVWEIPQEA
PPSGKEAPREGALAEFEAHRGTVFALCMSPDARTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf