prot_P-fluviatile_contig14.2170.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.2170.1
Unique Nameprot_P-fluviatile_contig14.2170.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length152
Homology
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BLAST of mRNA_P-fluviatile_contig14.2170.1 vs. uniprot
Match: A0A6H5L288_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L288_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 6.600e-73
Identity = 115/149 (77.18%), Postives = 131/149 (87.92%), Query Frame = 0 
Query:    1 MLAAVAAVACGGLIAGQHPHQLGWGVAMCLIGGMIGTWFSELNGGAEGRIKWGDWRCNAVSFAGMVTAARYAARLESEEREALVESTFFVALVAQGFGTISGFSDLSADAGDLALEGDYVGAAANMLLNITTALVALLVRFKAAKIFLQ 149
            ++AAVAA+A G  +AGQHPH+LGWG+ M ++GG+IG WFS LNGGAEGRI WGDWRCNA+SFAG++TA RYAA LE EEREA +ES FFVALVAQGFGTISGFSDLSADAGDLAL+GDY GAAANMLLNI TA+VAL  RFKAAKIF+ 
Sbjct:  152 LVAAVAAMAWGSWMAGQHPHKLGWGIIMAVMGGIIGNWFSTLNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESAFFVALVAQGFGTISGFSDLSADAGDLALKGDYWGAAANMLLNIATAVVALFARFKAAKIFIS 300
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L288_9PHAE6.600e-7377.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..151
NoneNo IPR availableTMHMMTMhelixcoord: 119..141
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:1493143..1495938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2170.1mRNA_P-fluviatile_contig14.2170.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 1493125..1496552 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.2170.1 ID=prot_P-fluviatile_contig14.2170.1|Name=mRNA_P-fluviatile_contig14.2170.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=152bp
MLAAVAAVACGGLIAGQHPHQLGWGVAMCLIGGMIGTWFSELNGGAEGRI
KWGDWRCNAVSFAGMVTAARYAARLESEEREALVESTFFVALVAQGFGTI
SGFSDLSADAGDLALEGDYVGAAANMLLNITTALVALLVRFKAAKIFLQA
P*
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