prot_P-fluviatile_contig14.2161.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.2161.1
Unique Nameprot_P-fluviatile_contig14.2161.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length288
Homology
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BLAST of mRNA_P-fluviatile_contig14.2161.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 4.870e-103
Identity = 177/290 (61.03%), Postives = 202/290 (69.66%), Query Frame = 0 
Query:    3 LLTPELRKTCVALWVEGDGNCFWRSCARVLWGTDVYWRQLKLVVLAWSSVNVGALVGEDGPLFRNGQ--HYDNDVHGRHVYRGRGDKRDYERDNYASMLQEQVAKFCQDRKWGGDLTGILTTERLGVVLKMASPVDMRARKRAD---AGLDKVKNYSGRYGLDHFGDQRQSLVRVPSGGRKEITVRGASGEPDIVVDEIAVALVGYSEARVGDWGLSDIPVISADTPQPQLAHYAAIVSTDPDVHVRRPLRMDIVGPSLWTKFDQSHAEQAAKEEAEWAERQARRAAQRV 287
            +LTPELRKT VALWVEGDGNCFWRS A+ LWGTD YWRQLKL VLAWS+VNV ALVGE G LF      HYD+++H +H+YRG   K D+  D+ ASML E +AKF  +R+WGG L G+L TER G+VLKM  P DMRAR RAD   A      +Y G    D FGD R S  +VP+ GRKEI +RG S E DIVV+EIA+ +  Y  A VGD  LSDIPVI ADT    L H+AAIV  DPDVHVRRP  M   GP L  KFD+S AE+ AKEEAEWAERQAR   QR 
Sbjct:   93 ILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLKLAVLAWSAVNVEALVGEGGALFGRAGIIHYDDEIHAKHIYRGPDGKVDHRLDDDASMLLESIAKFSANRQWGGCLAGVLFTERTGLVLKMPHPFDMRARIRADTSGAAAKATASYGGG-SEDEFGDHRYSFTKVPTAGRKEIILRGVSDEEDIVVEEIAITMASYDSAVVGDGSLSDIPVIEADTNLNHLNHFAAIVCADPDVHVRRPFPMSKAGPPLHAKFDKSDAERRAKEEAEWAERQARXXXQRA 381
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE4.870e-10361.03SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 266..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:1424831..1425919 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2161.1mRNA_P-fluviatile_contig14.2161.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 1424831..1425919 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.2161.1 ID=prot_P-fluviatile_contig14.2161.1|Name=mRNA_P-fluviatile_contig14.2161.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=288bp
MTLLTPELRKTCVALWVEGDGNCFWRSCARVLWGTDVYWRQLKLVVLAWS
SVNVGALVGEDGPLFRNGQHYDNDVHGRHVYRGRGDKRDYERDNYASMLQ
EQVAKFCQDRKWGGDLTGILTTERLGVVLKMASPVDMRARKRADAGLDKV
KNYSGRYGLDHFGDQRQSLVRVPSGGRKEITVRGASGEPDIVVDEIAVAL
VGYSEARVGDWGLSDIPVISADTPQPQLAHYAAIVSTDPDVHVRRPLRMD
IVGPSLWTKFDQSHAEQAAKEEAEWAERQARRAAQRVE
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