prot_P-fluviatile_contig14.2124.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig14.2124.1
Unique Name	prot_P-fluviatile_contig14.2124.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	188

Homology

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BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Match: D7FQE5_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE5_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 3.410e-125
Identity = 182/187 (97.33%), Postives = 182/187 (97.33%), Query Frame = 0

Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLHAASNKVGLPPSGGISAHGRTSGGVLSGGSSGIPGMRTR 187
            MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQIL AINDQ RLHAASNKVGLPPSGGISAHGR SGGV  GGSSGIPGMRTR
Sbjct:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILLAINDQNRLHAASNKVGLPPSGGISAHGRPSGGVGGGGSSGIPGMRTR 187

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BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Match: A0A835ZDS3_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS3_9STRA)

HSP 1 Score: 282 bits (721), Expect = 7.820e-95
Identity = 134/157 (85.35%), Postives = 150/157 (95.54%), Query Frame = 0

Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLHAASNKVGL 157
            MI+ V+IVNNHGKPRLVKFY+TV  E+AQ+SVI+RIFQQVAQRPD+FCNYLEG IPEWGEGTKLIYRHYATLYF+FAVDSQESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDE+IMGGMVLETNIN +L+A+NDQ++LHAAS KV L
Sbjct:    1 MIKAVVIVNNHGKPRLVKFYKTVTDEDAQQSVIRRIFQQVAQRPDNFCNYLEGSIPEWGEGTKLIYRHYATLYFIFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEMIMGGMVLETNINAVLSAVNDQSKLHAASMKVQL 157

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BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Match: W7T2Y9_9STRA (AP complex subunit sigma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Y9_9STRA)

HSP 1 Score: 275 bits (704), Expect = 2.930e-92
Identity = 133/154 (86.36%), Postives = 142/154 (92.21%), Query Frame = 0

Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLHAASNK 154
            MIRGVIIVNNHG+PRLVK YQ+V+GEEAQ+SVI+++FQQVAQRPDSFCNYL+G IPEWGEG KLIYRHYATLYFVFAVD QESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIM GMVLETNI  IL  INDQ RLHA S K
Sbjct:    1 MIRGVIIVNNHGRPRLVKLYQSVIGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQK 154

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BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Match: A0A6S8ZKR8_9STRA (AP complex subunit sigma n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZKR8_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.640e-91
Identity = 128/152 (84.21%), Postives = 142/152 (93.42%), Query Frame = 0

Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLHAAS 152
            MI+G++IVNNHGKPRLVKFYQ+V  EE Q+SVI+R+FQQVAQRPDSFCNYLEGIIPEWG   KLIYRHYATLYFVFAVDSQESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDEI+MGGMVLETNIN +L AI DQT++H +S
Sbjct:    1 MIKGILIVNNHGKPRLVKFYQSVTSEETQQSVIRRVFQQVAQRPDSFCNYLEGIIPEWGSNIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIVMGGMVLETNINSVLQAIGDQTKMHKSS 152

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BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Match: B5YNE9_THAPS (AP complex subunit sigma n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNE9_THAPS)

HSP 1 Score: 263 bits (671), Expect = 2.810e-87
Identity = 126/154 (81.82%), Postives = 139/154 (90.26%), Query Frame = 0

Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLHAASNK 154
            MI+G+IIVNN GKPRLVKFYQ V GE+ Q+SVI+R+FQQV+ RPDSFCNYLEG +PEWGE  KLIYRHYATLYFVFAVDSQESDLGILDL+QVFVEALDK FENVCELDLIFHSD+VHY+LDEI+MGGMVLETNIN IL AINDQ R+H  S K
Sbjct:    1 MIKGIIIVNNSGKPRLVKFYQNVFGEQRQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGENIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDRVHYILDEIVMGGMVLETNINSILQAINDQERMHNESMK 154

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BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Match: A0A7S2P852_9STRA (AP complex subunit sigma n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P852_9STRA)

HSP 1 Score: 263 bits (671), Expect = 3.010e-87
Identity = 126/164 (76.83%), Postives = 143/164 (87.20%), Query Frame = 0

Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLHAASNKVGLPPSGGIS 164
            MI+GVIIVNN GKPRL KFYQ+V  EE Q+ VI+R+F+Q++ RPD+FCNYLEGI+PEWG   KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEI+MGGMVLETNI  IL AI DQ +LHAAS K  +  + G+S
Sbjct:    1 MIKGVIIVNNQGKPRLAKFYQSVTSEEIQQRVIRRVFEQISSRPDNFCNYLEGIVPEWGSNIKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIVMGGMVLETNIASILQAIQDQGKLHAASLKAKVDKTDGLS 164

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BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Match: A0A7R9U773_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U773_9STRA)

HSP 1 Score: 263 bits (672), Expect = 3.640e-87
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0

Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLHAASNKVGLPPSGGISAHGRTS 170
            MI+ VI+VNNHGK RLVKFYQ V    AQ+SVI+R+FQQV QRPDSFCNYLEG +PEWG+  KLIYRHYATLYFVFAVDSQESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDEIIM GMVLETNI  IL AINDQ R+H ASNK   P +G     GR S
Sbjct:   14 MIKAVIVVNNHGKARLVKFYQNVDSVSAQQSVIRRVFQQVGQRPDSFCNYLEGSVPEWGDDVKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIIMAGMVLETNIVNILQAINDQHRMHMASNKA-QPGTGNAVGRGRPS 182

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BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Match: A0A8J9T0F8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T0F8_PHATR)

HSP 1 Score: 257 bits (657), Expect = 1.630e-85
Identity = 120/149 (80.54%), Postives = 135/149 (90.60%), Query Frame = 0

Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLH 149
            MI+G+IIVNNHGKPRLVKFYQ V  E  Q+SVI+R+FQQVA RPDSFCNYLEGI+PEWG+  KLIYRHYATLYFVFAVD QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHY+LDEI+MGGMVLETNI  +L +I DQ ++H
Sbjct:    1 MIKGIIIVNNHGKPRLVKFYQNVESEALQQSVIRRVFQQVAARPDSFCNYLEGIVPEWGDHIKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYILDEIVMGGMVLETNIQGVLQSIKDQGKIH 149

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BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Match: A0A1Z5JTJ4_FISSO (AP complex subunit sigma n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTJ4_FISSO)

HSP 1 Score: 258 bits (659), Expect = 2.230e-85
Identity = 121/152 (79.61%), Postives = 138/152 (90.79%), Query Frame = 0

Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLHAAS 152
            MI+G+IIVNNHGKPRLVKFYQ+V  E  Q+SVI+R+FQQVA RPDSFCNYLEG IPEWG+  KLIYRHYATL+FVFAVDSQESDLGILDL+QVFVE+LD+CFE+VCELDLIFHSD+VHYVLDEI+MGGMVLETNI+ +L A+ DQ RLH  S
Sbjct:    1 MIKGIIIVNNHGKPRLVKFYQSVESESLQQSVIRRVFQQVAARPDSFCNYLEGAIPEWGDNIKLIYRHYATLFFVFAVDSQESDLGILDLIQVFVESLDRCFESVCELDLIFHSDRVHYVLDEIVMGGMVLETNIHSVLQAVKDQDRLHKDS 152

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BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Match: K0SBT8_THAOC (Clat_adaptor_s domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBT8_THAOC)

HSP 1 Score: 259 bits (662), Expect = 1.840e-83
Identity = 126/158 (79.75%), Postives = 140/158 (88.61%), Query Frame = 0

Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLHAASNKVGLP 158
            MI+G+IIVNN GKPRLVKFYQ V GEE Q+SVI+R+FQQV+ RPDSFCNYLEG +PEWGE  KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDK FENVCELDLIFHSDKVH++LDEI+MGGMVLETNIN IL AI+DQ R+H  S K   P
Sbjct:  174 MIKGIIIVNNSGKPRLVKFYQNVFGEEKQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGEKCKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDKVHHILDEIVMGGMVLETNINAILQAISDQERMHKDSMKTKGP 331

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig14.2124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQE5_ECTSI	3.410e-125	97.33	AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835ZDS3_9STRA	7.820e-95	85.35	AP complex subunit sigma n=1 Tax=Tribonema minus T...	[more]
W7T2Y9_9STRA	2.930e-92	86.36	AP complex subunit sigma n=2 Tax=Monodopsidaceae T...	[more]
A0A6S8ZKR8_9STRA	1.640e-91	84.21	AP complex subunit sigma n=1 Tax=Ditylum brightwel...	[more]
B5YNE9_THAPS	2.810e-87	81.82	AP complex subunit sigma n=1 Tax=Thalassiosira pse...	[more]
A0A7S2P852_9STRA	3.010e-87	76.83	AP complex subunit sigma n=1 Tax=Leptocylindrus da...	[more]
A0A7R9U773_9STRA	3.640e-87	77.65	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A8J9T0F8_PHATR	1.630e-85	80.54	Hypothetical protein (Fragment) n=2 Tax=Phaeodacty...	[more]
A0A1Z5JTJ4_FISSO	2.230e-85	79.61	AP complex subunit sigma n=2 Tax=Fistulifera solar...	[more]
K0SBT8_THAOC	1.840e-83	79.75	Clat_adaptor_s domain-containing protein n=2 Tax=T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016635	Adaptor protein complex, sigma subunit	PIRSF	PIRSF015588	AP_complex_sigma	coord: 1..156 e-value: 2.8E-52 score: 174.5
IPR016635	Adaptor protein complex, sigma subunit	PANTHER	PTHR11753	CLATHRIN COAT ASSEMBLY PROTEIN	coord: 1..166
None	No IPR available	GENE3D	3.30.450.60		coord: 1..157 e-value: 5.2E-59 score: 200.3
None	No IPR available	PANTHER	PTHR11753:SF10	AP-3 COMPLEX SUBUNIT SIGMA-2	coord: 1..166
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..144 e-value: 7.0E-47 score: 158.9
IPR000804	Clathrin adaptor complex, small chain	PROSITE	PS00989	CLAT_ADAPTOR_S	coord: 64..74
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..145

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig14	contig	P-fluviatile_contig14:1149417..1151586 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig14.2124.1	mRNA_P-fluviatile_contig14.2124.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig14 1149395..1152083 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig14.2124.1 ID=prot_P-fluviatile_contig14.2124.1|Name=mRNA_P-fluviatile_contig14.2124.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=188bp
MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNY
LEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDK
CFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQTRLHA
ASNKVGLPPSGGISAHGRTSGGVLSGGSSGIPGMRTR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016635	AP_complex_ssu
IPR022775	AP_mu_sigma_su
IPR000804	Clathrin_sm-chain_CS
IPR011012	Longin-like_dom_sf