prot_P-fluviatile_contig14.2056.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig14.2056.1
Unique Name	prot_P-fluviatile_contig14.2056.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	186

Homology

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BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Match: D7FQ94_ECTSI (Small nucleolar ribonucleoprotein U3 component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ94_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 5.040e-119
Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 0

Query:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVSVSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG 185
            MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLK LD SDEFRIKMTEQLLEKLFAMG+INTKKSLAKTET SVS+FC RRRLPVVMVRLKMSETLTEA TYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG
Sbjct:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKTLDASDEFRIKMTEQLLEKLFAMGIINTKKSLAKTETASVSSFC-RRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG 184

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BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Match: A0A6S9JYI8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JYI8_HETAK)

HSP 1 Score: 276 bits (707), Expect = 1.120e-92
Identity = 140/183 (76.50%), Postives = 160/183 (87.43%), Query Frame = 0

Query:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVSVSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLG 183
            MRKLK+HEQKLLKKVDFLQWKSDQNIREI+++RRYL+Q+R+DY KYNKI G + KL A+L+AL P+D+FRIKMTE LLEKLF MGVIN+KKSL   E V+VSAFC RRRLPVVMVRLKMSET+ EA T+IE GHVRVGPH VTDPAFLV R+MEDF+TWVD SKIKR I  Y DK+DD+DLLG
Sbjct:    1 MRKLKHHEQKLLKKVDFLQWKSDQNIREIKIIRRYLLQDREDYTKYNKICGHMWKLVAKLRALPPTDQFRIKMTEDLLEKLFNMGVINSKKSLQLVEKVNVSAFC-RRRLPVVMVRLKMSETIKEAITFIEHGHVRVGPHCVTDPAFLVPRAMEDFLTWVDSSKIKRTIMKYNDKLDDYDLLG 182

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BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Match: A0A836CN51_9STRA (Small nucleolar ribonucleoprotein U3 component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN51_9STRA)

HSP 1 Score: 275 bits (702), Expect = 6.710e-92
Identity = 139/185 (75.14%), Postives = 160/185 (86.49%), Query Frame = 0

Query:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVSVSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG 185
            MRKLKYHEQKLLKKVDFLQWKSDQNIREI+VLRRY +Q+R+DYVKYN++VG +T L A+LK L  +D FR+KMT QLL KL ++GVI+T+KSL K E ++VSAFC RRRLPVVMVR KMSETL EA T+IE GH+RVGP+ VTDPAFLVTR+MEDFVTWVD SKIKR I  Y DK+DDFDLLGEG
Sbjct:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIKVLRRYHIQDREDYVKYNRLVGHVTSLAAKLKTLSSTDPFRVKMTSQLLSKLQSIGVIDTEKSLIKAEQLTVSAFC-RRRLPVVMVRAKMSETLREAITFIESGHIRVGPNVVTDPAFLVTRTMEDFVTWVDSSKIKRTIAKYNDKLDDFDLLGEG 184

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BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Match: W7TBD6_9STRA (Ribosomal protein S4/S9 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBD6_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.860e-91
Identity = 138/183 (75.41%), Postives = 160/183 (87.43%), Query Frame = 0

Query:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVSVSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLG 183
            MR+L++HEQKLLKKVDFLQWKSDQNIREI++LRRY +Q+R+DYVKYNKI G ITKLTA+LK L P DEFRIKMT+ LL KL+ MG+I TKKSL++ ET++ SAFC RRRLPVVMVR+KM+ETL EA T+IEQGHVRVGP  VTDP FLVTRS EDF+TWVD SKIKRA+  Y DK+DDFDLLG
Sbjct:    1 MRQLRHHEQKLLKKVDFLQWKSDQNIREIKILRRYHIQDREDYVKYNKICGHITKLTAKLKDLKPEDEFRIKMTDDLLSKLYNMGLIPTKKSLSQCETLAASAFC-RRRLPVVMVRMKMAETLKEAVTFIEQGHVRVGPTVVTDPTFLVTRSQEDFLTWVDSSKIKRAVVAYNDKLDDFDLLG 182

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BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Match: D8UBE0_VOLCA (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=D8UBE0_VOLCA)

HSP 1 Score: 261 bits (668), Expect = 9.420e-87
Identity = 132/182 (72.53%), Postives = 156/182 (85.71%), Query Frame = 0

Query:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVSVSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLL 182
            MR+LKYHEQKLLKKVDFL+WKSD N+RE+QVLRRY +Q+RDDY KYNKI G+ITKLT+ LK LDP D  RI++T+QLLEKL+ MGV+ TKKSL + + ++ +AFC RRRL VVMVRLKMSETL EAAT+IEQGHVRVGP  VTDPAF VTR+MEDFVTWVD SK+KR +  Y DK+DD+DLL
Sbjct:    1 MRQLKYHEQKLLKKVDFLRWKSDDNVRELQVLRRYHIQDRDDYKKYNKICGMITKLTSMLKRLDPKDATRIELTDQLLEKLYNMGVLPTKKSLVQCDKLATAAFC-RRRLAVVMVRLKMSETLREAATFIEQGHVRVGPDTVTDPAFHVTRNMEDFVTWVDTSKVKRKVLKYNDKLDDYDLL 181

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BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Match: A8IEP3_CHLRE (Small nucleolar ribonucleoprotein U3 component n=4 Tax=Chlamydomonadales TaxID=3042 RepID=A8IEP3_CHLRE)

HSP 1 Score: 253 bits (645), Expect = 2.990e-83
Identity = 126/182 (69.23%), Postives = 154/182 (84.62%), Query Frame = 0

Query:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVSVSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLL 182
            MR+LK+HEQKLLKKVDFL+WKSD N+RE+QV+RRY +Q+RDDY KYNKI G++TKLT+ LK LD  D  R+++T+QLLEKL AMG+I TKKSL + + +  ++FC RRRL VVMVRLKM+ETL EAAT+IEQGHVRVGP  VTDPAF VTR+MEDFVTWVD SK+KR +  Y DK+DD+DLL
Sbjct:    1 MRQLKHHEQKLLKKVDFLRWKSDDNVRELQVMRRYHIQDRDDYKKYNKISGMVTKLTSMLKQLDAKDPARVELTDQLLEKLHAMGIIPTKKSLVQCDKLPTASFC-RRRLAVVMVRLKMAETLREAATFIEQGHVRVGPDTVTDPAFHVTRNMEDFVTWVDTSKVKRKVLKYNDKLDDYDLL 181

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BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Match: A0A1Y1IKI8_KLENI (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKI8_KLENI)

HSP 1 Score: 252 bits (643), Expect = 6.020e-83
Identity = 122/183 (66.67%), Postives = 154/183 (84.15%), Query Frame = 0

Query:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVSVSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLG 183
            MRKLK+HEQKLLKKVDFLQWK++ N+RE+Q +R+Y + +RDDY KYNK+ G++TKLT+ LK LDP D FRI++T+QLLEKL+ MGVI T+KSLA  + +S S+FC RRRL V++VRLK +ET+ EA T++EQGH+RVGP  VTDPAFLV R+MEDFVTWVD SKIKR +  Y DK+DD+DLLG
Sbjct:    1 MRKLKFHEQKLLKKVDFLQWKNEHNLREVQAMRQYHITDRDDYKKYNKLCGMVTKLTSILKKLDPQDPFRIELTDQLLEKLYNMGVIPTRKSLALCDKLSTSSFC-RRRLAVMLVRLKFAETMREAVTFVEQGHIRVGPETVTDPAFLVVRNMEDFVTWVDTSKIKRKVLKYNDKLDDYDLLG 182

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BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Match: L1JBM1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBM1_GUITC)

HSP 1 Score: 252 bits (643), Expect = 6.230e-83
Identity = 125/182 (68.68%), Postives = 149/182 (81.87%), Query Frame = 0

Query:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVSVSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLL 182
            MR+LKYHE+KLLKKV+F QWKSD+N+REIQ+LRRY VQNRDDY KYNKI GLITKLT++LK L   D  R+K TE L++KL+ MG+I+TKKSL + E +  SAFC RRRLPVV+VRLK  E L EA T++EQGH+R+GP  VTDPAF VTRSMEDF+TWVD SKI+R +  Y D VDDFDLL
Sbjct:    1 MRQLKYHEEKLLKKVNFFQWKSDKNVREIQILRRYRVQNRDDYHKYNKIAGLITKLTSKLKELRQDDPTRVKTTELLIDKLYNMGLISTKKSLLQCEKIPTSAFC-RRRLPVVLVRLKFCENLKEAVTFVEQGHIRIGPEVVTDPAFHVTRSMEDFITWVDSSKIRRKVMKYNDAVDDFDLL 181

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BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Match: A0A7S1X290_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X290_9CHLO)

HSP 1 Score: 251 bits (642), Expect = 8.550e-83
Identity = 126/182 (69.23%), Postives = 154/182 (84.62%), Query Frame = 0

Query:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVSVSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLL 182
            MR+LK+HEQKLLKKV+FLQWKS+ N+RE+QV+RRY +QNRDDY  YNKI G +TKLTA L+ LD  D  RI++T++LL+KL+ MGV++TKKSL + E +S ++FC RRRL VVMVRLKMSETL EA T+IEQGHVRVGP+ VTDPAFLVTR+ EDFVTWVD SKIKR +  Y DK+DD+DLL
Sbjct:    1 MRQLKHHEQKLLKKVNFLQWKSEHNMREVQVMRRYHIQNRDDYKSYNKICGHVTKLTAVLRKLDSRDPVRIELTDKLLDKLYNMGVLSTKKSLLQVEKISTASFC-RRRLAVVMVRLKMSETLKEAVTFIEQGHVRVGPNTVTDPAFLVTRNFEDFVTWVDTSKIKRKVMKYNDKLDDYDLL 181

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BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Match: A0A250X5I3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X5I3_9CHLO)

HSP 1 Score: 251 bits (641), Expect = 1.210e-82
Identity = 127/182 (69.78%), Postives = 156/182 (85.71%), Query Frame = 0

Query:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVSVSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLL 182
            MR+LK+HE+KLLKKVDFL+WK++ N+RE+QV+RRY +Q+RDDY KYNKIVGLITKLT+ LK LD  D  RI++T+QLLEKLF+MGV+ TKKSL +TE ++VSAFC RRRL VVM+RLKM+ET+ EA T+IEQGHVRVG   VT+PAF VT +MEDFVTWVD SKIKR +  Y DK+DD+DLL
Sbjct:    1 MRQLKFHEKKLLKKVDFLKWKNEDNLRELQVMRRYHIQDRDDYKKYNKIVGLITKLTSVLKQLDAKDTARIELTDQLLEKLFSMGVVPTKKSLVQTEKLAVSAFC-RRRLSVVMMRLKMAETMKEAVTFIEQGHVRVGTETVTNPAFHVTTNMEDFVTWVDTSKIKRKVLMYNDKLDDYDLL 181

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig14.2056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQ94_ECTSI	5.040e-119	96.22	Small nucleolar ribonucleoprotein U3 component n=2...	[more]
A0A6S9JYI8_HETAK	1.120e-92	76.50	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A836CN51_9STRA	6.710e-92	75.14	Small nucleolar ribonucleoprotein U3 component n=1...	[more]
W7TBD6_9STRA	1.860e-91	75.41	Ribosomal protein S4/S9 n=3 Tax=Monodopsidaceae Ta...	[more]
D8UBE0_VOLCA	9.420e-87	72.53	Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ...	[more]
A8IEP3_CHLRE	2.990e-83	69.23	Small nucleolar ribonucleoprotein U3 component n=4...	[more]
A0A1Y1IKI8_KLENI	6.020e-83	66.67	Alpha-L RNA-binding motif/Ribosomal protein S4 fam...	[more]
L1JBM1_GUITC	6.230e-83	68.68	Uncharacterized protein n=1 Tax=Guillardia theta (...	[more]
A0A7S1X290_9CHLO	8.550e-83	69.23	Hypothetical protein n=1 Tax=Tetraselmis chuii Tax...	[more]
A0A250X5I3_9CHLO	1.210e-82	69.78	Uncharacterized protein n=1 Tax=Chlamydomonas eust...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001912	Ribosomal protein S4/S9, N-terminal	SMART	SM01390	Ribosomal_S4_2	coord: 3..106 e-value: 9.9E-27 score: 104.8
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 3..62 e-value: 3.9E-8 score: 34.1
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 108..173 e-value: 1.7E-5 score: 34.2
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 108..154 e-value: 2.3E-11 score: 43.2
IPR002942	RNA-binding S4 domain	PROSITE	PS50889	S4	coord: 108..172 score: 10.018
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 109..180 e-value: 3.1E-6 score: 29.2
None	No IPR available	PANTHER	PTHR11831:SF1	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3	coord: 1..181
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 27..175
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 1..181

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig14	contig	P-fluviatile_contig14:566113..571762 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig14.2056.1	mRNA_P-fluviatile_contig14.2056.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig14 566058..572492 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig14.2056.1 ID=prot_P-fluviatile_contig14.2056.1|Name=mRNA_P-fluviatile_contig14.2056.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=186bp
MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIV
GLITKLTARLKALDPSDEFRIKMTEQLLEKLFAMGVINTKKSLAKTETVS
VSAFCSRRRLPVVMVRLKMSETLTEAATYIEQGHVRVGPHAVTDPAFLVT
RSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001912	Ribosomal_S4/S9_N
IPR002942	S4_RNA-bd
IPR036986	S4_RNA-bd_sf
IPR022801	Ribosomal_S4/S9