prot_P-fluviatile_contig13.1926.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1926.1
Unique Nameprot_P-fluviatile_contig13.1926.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length155
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig13.1926.1 vs. uniprot
Match: D7G1A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A0_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.210e-28
Identity = 54/99 (54.55%), Postives = 72/99 (72.73%), Query Frame = 0 
Query:   57 RKAWARTAKPDSKDSGND-NKLDVLTGSGLRGMDTSKLKGNERRDAEWFQRTADREGRGQLAFFEDPAFYIAVSVLAPLVILTWGVLNCYIPGFCPVTL 154
            R +WA +A    K+  +D +++D+LTGSGLRG+DTSKL GNE+RDA+WF RT  RE    L +FEDP FY+ + ++ P+V L WG LNCY+PG CP TL
Sbjct:   19 RSSWATSATKRGKEGDDDGDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRE----LVWFEDPVFYLGLCLIVPVVGLVWGALNCYVPGICPSTL 113
[Close]
BLAST of mRNA_P-fluviatile_contig13.1926.1 vs. uniprot
Match: A0A6H5KI54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI54_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.330e-26
Identity = 53/101 (52.48%), Postives = 69/101 (68.32%), Query Frame = 0 
Query:   57 RKAWARTAKPDSKDSGNDN---KLDVLTGSGLRGMDTSKLKGNERRDAEWFQRTADREGRGQLAFFEDPAFYIAVSVLAPLVILTWGVLNCYIPGFCPVTL 154
            R +WA  A      S +D+   ++D+LTGSGLRG+DTSKL GNE+RDA+WF RT  RE    L +FEDP FY+ + ++ P+V L WG  NCY+PG CP TL
Sbjct:   73 RNSWATRATKRGNTSNDDDDIDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRE----LVWFEDPVFYLGLCLIVPVVGLVWGAFNCYVPGICPATL 169
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1A0_ECTSI1.210e-2854.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KI54_9PHAE1.330e-2652.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..25
score: 0.523
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2893310..2893774 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1926.1mRNA_P-fluviatile_contig13.1926.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 2892019..2894372 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1926.1 ID=prot_P-fluviatile_contig13.1926.1|Name=mRNA_P-fluviatile_contig13.1926.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=155bp
MTMMLAQTRLVVVPVALLMLLSATAIEAFAFTALTTDARRYCREGPMSSP
PGAKSGRKAWARTAKPDSKDSGNDNKLDVLTGSGLRGMDTSKLKGNERRD
AEWFQRTADREGRGQLAFFEDPAFYIAVSVLAPLVILTWGVLNCYIPGFC
PVTL*
back to top