prot_P-fluviatile_contig13.1900.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1900.1
Unique Nameprot_P-fluviatile_contig13.1900.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length479
Homology
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BLAST of mRNA_P-fluviatile_contig13.1900.1 vs. uniprot
Match: D7G990_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G990_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 6.620e-44
Identity = 112/241 (46.47%), Postives = 145/241 (60.17%), Query Frame = 0 
Query:   39 HYGFVVPLDSELVKDFQTATLNLREDGTLSSIIDNYLRPTQICAPASTDNGNDTNLTVADVSGVFVVLAFFLAISTISWCFRRSPWAKRSRARRQERLRTQDSDIERSVFENYAKMSRRQQKAFAMQATVSLLQNSREVNAASKILLNA-RRGDSKDPGGDGDPRGDRKGSD--------------GAPGDPKGTTVRRKKPFQDEIASGRPVVTLGGGGEDSSNHSWPSRSASTSSLLFR 264
            HYG V+P  S L ++ Q ATL LREDGTLS I + YL P+ +C P +T     +N+TV+DVSGVF VL FF+  +T+SWCFRRSPWAKR++ RR  RL  +    E+SV ++YAKMSR QQKAFAMQATV+LLQ+SRE++A+SK L+     G  K P   G                         APG+ +         F+ E+A GRPVV +GGG  DS +  +  R+ S S LL R
Sbjct:   61 HYGLVLPYGSGLTEELQAATLQLREDGTLSDIEETYLDPSAVCVPVTTSEEESSNMTVSDVSGVFFVLGFFVIAATVSWCFRRSPWAKRAKERR--RLE-KGGAAEQSVMDSYAKMSRGQQKAFAMQATVNLLQHSRELSASSKTLMEGISEGAKKVPDAAGXXXXXXXXXXXXXXXXXXXXXXXRAAPGEAE---------FRREMAEGRPVVGIGGGMGDS-DQGFTRRAPSLSGLLSR 288
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BLAST of mRNA_P-fluviatile_contig13.1900.1 vs. uniprot
Match: A0A6H5JES6_9PHAE (PBPe domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES6_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 6.720e-16
Identity = 47/96 (48.96%), Postives = 61/96 (63.54%), Query Frame = 0 
Query:    2 VMNGTALTALADSATAEYELMNDFCGLTTLPQELYPQHYGFVVPLDSELVKDFQTATLNLREDGTLSSIIDNYLRPTQICAPASTDNGNDTNLTVA 97
            V+NG+ALT LADSATA+Y+L NDFCGLTTL + LYPQ                  ATL LREDGTL  I ++YL P+ +C P +T     +N+T++
Sbjct:  404 VLNGSALTTLADSATADYQLQNDFCGLTTLAEVLYPQ------------------ATLQLREDGTLIDIEESYLDPSVVCVPVTTSEEESSNMTIS 481
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G990_ECTSI6.620e-4446.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JES6_9PHAE6.720e-1648.96PBPe domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..478
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..98
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2717092..2722367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1900.1mRNA_P-fluviatile_contig13.1900.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 2714621..2723580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1900.1 ID=prot_P-fluviatile_contig13.1900.1|Name=mRNA_P-fluviatile_contig13.1900.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=479bp
MVMNGTALTALADSATAEYELMNDFCGLTTLPQELYPQHYGFVVPLDSEL
VKDFQTATLNLREDGTLSSIIDNYLRPTQICAPASTDNGNDTNLTVADVS
GVFVVLAFFLAISTISWCFRRSPWAKRSRARRQERLRTQDSDIERSVFEN
YAKMSRRQQKAFAMQATVSLLQNSREVNAASKILLNARRGDSKDPGGDGD
PRGDRKGSDGAPGDPKGTTVRRKKPFQDEIASGRPVVTLGGGGEDSSNHS
WPSRSASTSSLLFRRVPSQQPLSHQRDNSSASHRRDGSHVGANRMMSFNR
GRSGGGFSTLGSSSGFLPTPPKQPAADDEVSPLPAANKGGLAVRSAASKW
LARRGGNGGKGREGRGGGACRRGGVQYAGSNDNGMAAAAAEAAATVDVAD
NNSTAVDEKEERGAAIASTVGCSSDRSWRFSSDDGAGAMSDALVGAAEAL
AGAAAAAEGRQSAAGSLRSDESDTEGKE*
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