prot_P-fluviatile_contig13.1795.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1795.1
Unique Nameprot_P-fluviatile_contig13.1795.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length696
Homology
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BLAST of mRNA_P-fluviatile_contig13.1795.1 vs. uniprot
Match: D8LRK0_ECTSI (Nucleosome/chromatin assembly factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK0_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.570e-14
Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 0 
Query:  361 QQQHQHPPYPDMVVEALYELADARGSSQLAIVNWLKAS-QYGWMVXXXXXXXXXXXXXXXX-QALAEGKIVKVRTNYRISPEHAKALNL 447
            ++Q Q P +PDMVVEAL+ L+D+RGSS+LA V WLK+S +YGWM                  QAL EGK+V+VRTNYRISP+HA+AL+L
Sbjct:  175 EEQLQPPSFPDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQALEEGKVVQVRTNYRISPDHARALSL 263
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRK0_ECTSI1.570e-1455.06Nucleosome/chromatin assembly factor group n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 308..335
NoneNo IPR availableCOILSCoilCoilcoord: 338..358
NoneNo IPR availablePANTHERPTHR46705:SF10coord: 300..367
NoneNo IPR availablePANTHERPTHR46705FAMILY NOT NAMEDcoord: 300..367
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 363..434
e-value: 8.8E-6
score: 35.2
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 366..432
e-value: 3.5E-7
score: 30.5
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 365..439
score: 18.597
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 361..457
e-value: 7.5E-8
score: 34.4
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 363..444

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1725326..1729407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1795.1mRNA_P-fluviatile_contig13.1795.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 1725325..1729407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1795.1 ID=prot_P-fluviatile_contig13.1795.1|Name=mRNA_P-fluviatile_contig13.1795.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=696bp
HITRTGAAPSRTPCAPLLSVPACKLLRLCASTLNMQEQHQLNVLKLSAGQ
DVIVIGENADGATYRSAVVMTPPGWGDWQGGIEGGAKAIKVRFTGVGQGT
PDEVVDIKHLLAVDDETLRLKEEYEAHARNPQAKTRARAPSSTKDTTMTT
TAAAPPPRALAAARGPAAPPAAAEMSYGSHLAQFSSPPWEAEPPPSEGFG
GSGGEWKGGDFSGWPPLFPGSNRSADYAADMGITGMTGSGWAAPPRETRW
GGMIAASGGEDGRDSREERDRFDHLWPGEGFAGDSGGWSGGGRGGGRWDE
EQQLMQQQRSLLQQRQQDKRERQQQQRQEQQQQQRWRLQQKQEDEQERQQ
RQQQLQKQPHQQQHQHPPYPDMVVEALYELADARGSSQLAIVNWLKASQY
GWMVAREEGGVKANVAAGIKQALAEGKIVKVRTNYRISPEHAKALNLPAK
ATKSRRKSGTAGSTSGGERKATKKRKTEQGANVGHDNRDGPRANPANVKE
STSDDRVHAADPQPEDVAEIGVGGTVGGASGDVSDRGEVGGGHVCGSGGE
VASGRGDDSNDAAGGGGDSAARVSGGSVGGIADGEVPNAAANVGRSSGSP
PESCDPPRDAEDGGGSSSSAAGAAAAGGAPGMMASSAGEGQKHKEAKPPG
SAGKPKGRESGVAGNRFQSQNLVEDELLQAEEDELLSAAAVDGGDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf