prot_P-fluviatile_contig13.1775.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1775.1
Unique Nameprot_P-fluviatile_contig13.1775.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length291
Homology
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Match: D8LRK7_ECTSI (YqgFc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK7_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 7.780e-111
Identity = 188/259 (72.59%), Postives = 203/259 (78.38%), Query Frame = 0
Query:   37 IHPSVAWLYPASTTSDQSSYGSSSXXGSGRKHKKRRTLCVDYGTRRIGLAISVGISPRTVPGVSNRGSDLEVARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVLADVGAASRPPVGVFLWDERFSTAQAGAMLDPYGGGMSSKVEIDSLAASLILEHFFKEGGVETAEKVIPSTGAVTAEVLLAAGRGGAGERERGGGEEDRE-----EDAFGEGSRRRFQEMREESARSTAARASGPTRKSPRKRRRR 290
            +HPSV+WLYP   +S  +   + +     +    RRTLCVDYGTRR+GLAI VGISPR VPGV+N GSDLEVARQVLVRARGEGIRDIVVGLPL RNGTETEMCEIVRGFASVLADVGAASRP  GVFLWDERFS+AQA AMLDPYGGGMSSKVEIDSLAASLIL+HFF+EGG   AEKV PSTG VTAEV  AAGR G        GEED       EDA+GEGSRRRFQEMREESARS AA      R++ RKRRRR
Sbjct:   44 VHPSVSWLYPPKPSSTTAVKTTDTRSQETKTRPSRRTLCVDYGTRRVGLAIGVGISPRAVPGVTNVGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETEMCEIVRGFASVLADVGAASRPTAGVFLWDERFSSAQAAAMLDPYGGGMSSKVEIDSLAASLILKHFFEEGGTNNAEKVKPSTGVVTAEVWRAAGRDGE------EGEEDESXXXXXEDAYGEGSRRRFQEMREESARSAAAGEDSARRRAWRKRRRR 296          
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Match: A0A7S2ZDD4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDD4_9RHOD)

HSP 1 Score: 104 bits (259), Expect = 3.180e-23
Identity = 74/166 (44.58%), Postives = 94/166 (56.63%), Query Frame = 0
Query:   65 GRKHKKRRTLCVDYGTRRIGLAISVGISPRTVPGVSNRGSDLEVARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVLADVGAASRPPVGVFLWDERFSTAQAGAMLDPYGGGMSSK-----VE--IDSLAASLILEHFFKEGGVETAEKVIPSTGAV 223
            G+ H  ++TL VDYG RR+GLA+SVGI+PR +  + NRG+  EVAR++   AR E +  +VVGLPL   G E E     R F   L    A   PP+  +LWDERFST  A   L      MSSK     VE  +DS AA  ILE FF+  G + AE + P  G +
Sbjct:   16 GKVHLGKKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLRI--ALPEPPI--YLWDERFSTQTARNRL------MSSKTYRNQVENFVDSEAAVAILEDFFENSG-DDAELLYPGRGGL 170          
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Match: A0A7S3X7E5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X7E5_EMIHU)

HSP 1 Score: 99.4 bits (246), Expect = 2.270e-21
Identity = 65/148 (43.92%), Postives = 90/148 (60.81%), Query Frame = 0
Query:   72 RTLCVDYGTRRIGLAISVGISPRTVPGVSNRGSDLE-VARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVLADVGAASRPPVGVFLWDERFSTAQAGAMLDPYGGGMSSKVEIDSLAASLILEHFFKEGGVETAEKVIP 218
            RTL VD+G RR GLA+S GI+P  +  + ++ ++L  VA QV+  AR EG   +V+G+P   +G E E     R F  +LA   AA RP   V+LWDERFS+A+A +M    G G +    ID +AA++ILE FF EG   +AE + P
Sbjct:   62 RTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLARE-AAPRP---VYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFF-EGDFASAELIAP 203          
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Match: A0A7S4D691_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D691_HETAK)

HSP 1 Score: 99.8 bits (247), Expect = 5.470e-21
Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 0
Query:   72 RTLCVDYGTRRIGLAISVG-ISPRTVPGVSNRGSDLEVARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVLADVGAASRPPVGVFLWDERFSTAQAGAMLDPYGGGMSSKVEIDSLAASLILEHFFKEGG 209
            R L VDYGT+R+G+AIS G I+PR V  + N G D +V R++   AR E I   VVG+PL R+G ET    I R F+  LAD  +   P V V++W+E FS+  A ++L     G      +D++AA +ILE +F E G
Sbjct:   74 RVLGVDYGTKRVGIAISAGGIAPRPVKIIQNSGDDSQVIREIKFMARAEQISSFVVGVPLQRDGAETNQSIINRNFSQTLADEVS---PRVPVYVWNEAFSSVAAESLLLHKSRGEIDAC-LDAVAACMILEDYFSEDG 208          
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Match: R1ED05_EMIHU (YqgFc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ED05_EMIHU)

HSP 1 Score: 97.1 bits (240), Expect = 1.950e-20
Identity = 64/146 (43.84%), Postives = 89/146 (60.96%), Query Frame = 0
Query:   72 RTLCVDYGTRRIGLAISVGISPRTVPGVSNRGSDLE-VARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVLADVGAASRPPVGVFLWDERFSTAQAGAMLDPYGGGMSSKVEIDSLAASLILEHFFKEGGVETAEKV 216
            RTL VD+G RR GLA+S GI+P  +  + ++ ++L  VA QV+  AR EG   +V+G+P   +G E E     R F  +LA   AA RP   V+LWDERFS+A+A +M    G G +    ID +AA++ILE FF EG   +AE +
Sbjct:   26 RTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLARE-AAPRP---VYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFF-EGDFASAELI 165          
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Match: A0A7S3E813_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E813_9RHOD)

HSP 1 Score: 92.0 bits (227), Expect = 3.780e-19
Identity = 53/111 (47.75%), Postives = 68/111 (61.26%), Query Frame = 0
Query:   65 GRKHKKRRTLCVDYGTRRIGLAISVGISPRTVPGVSNRGSDLEVARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVLADVGAASRPPVGVFLWDERFSTAQA 175
            G+ H  ++TL VDYG RR+GLA+SVGI+PR +  + NRG+  EVAR++   AR E +  +VVGLPL   G E E     R F   L    A   PP+  +LWDERFST  A
Sbjct:   16 GKVHLGKKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLRI--ALPEPPI--YLWDERFSTQTA 122          
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Match: A0A7S2WGV2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGV2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.280e-18
Identity = 57/150 (38.00%), Postives = 84/150 (56.00%), Query Frame = 0
Query:   71 RRTLCVDYGTRRIGLAISVGISPRTVPGVSNRGSDLEVARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVLADVGAASRPPVGVFLWDERFSTAQAGAMLDPYGGGMSSKV--EIDSLAASLILEHFFKEGGVETAEKVIP 218
            R  L VDYGTRRIGLA+S G SPR V  + + G+  E+  ++L  A+GE    +VVG PL ++G E    ++ R F  VLA   A     +GV++ DER+S+A+A A L         ++   +D+ +A  IL  FF E    + E++ P
Sbjct:   57 RLALGVDYGTRRIGLAMSAGFSPRPVLTIKHTGNTTEMVHKILNIAKGEDAELLVVGNPLNQDGEENFQSDLTRNFTQVLASEVARRSLKLGVYMKDERYSSAEAEANLQFVSKKSKGRMLAVLDAESACSILRAFFNEPVDSSVERITP 206          
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Match: A0A7S3F3A2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F3A2_9EUKA)

HSP 1 Score: 84.7 bits (208), Expect = 3.590e-16
Identity = 62/136 (45.59%), Postives = 81/136 (59.56%), Query Frame = 0
Query:   84 GLAISVGISPRTVPGVSNRGSDLE---VARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVLADVGAASRPPVGVFLWDERFSTAQAGAMLDPYGGGMSSKVEIDSLAASLILEHFFKEGGVETAEKV 216
            G+A+S G SP  +  VS  GS  +   VA Q+   A GEG   IV+GLPL  +G E E   + R FAS LA    AS+ PV  FLWDERFS+A+A   ++  G G S+   ID++AA++ILE FF  G   TAE +
Sbjct:    1 GVALSSGFSPIPLTVVSCNGSKEDFPQVASQICRIALGEGASQIVLGLPLNSSGGEGEQAVVTREFASSLA---CASQLPV--FLWDERFSSAEASMRMNS-GRGASAGQTIDAVAAAIILEEFFA-GEWATAESI 129          
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Match: A0A8J2T1I1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1I1_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 9.180e-16
Identity = 53/133 (39.85%), Postives = 74/133 (55.64%), Query Frame = 0
Query:   73 TLCVDYGTRRIGLAISVGISPRTVPGVSNRGSDLEVARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVLADVGAASRPPVGVFLWDERFSTAQAGAMLDPYGGGMSSKVEIDSLAASLILEHFF 205
            TL VDYG RR+G+ + VG + R +  + +      V  ++L  AR E I  IVVGLPL ++G E   C   R FA  LA    A+ P   + LWDERFS+ +A A+L    G       +D++AA +IL+ FF
Sbjct:   78 TLGVDYGLRRVGVCVGVGFASRPLEVIEHDEDIDAVVARLLQIARRERIASIVVGLPLEKDGAEGLQCAATRRFADALA----AAAPATPLVLWDERFSSREAEALLAHRPGAA-----LDAVAACVILDDFF 201          
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Match: A0A838RI18_9CHLR (Putative pre-16S rRNA nuclease n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RI18_9CHLR)

HSP 1 Score: 81.6 bits (200), Expect = 1.970e-15
Identity = 57/149 (38.26%), Postives = 83/149 (55.70%), Query Frame = 0
Query:   73 TLCVDYGTRRIGLAISVGISPRTVPGVSNRGSDLEVARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVLADVGAASRPPVGVFLWDERFSTAQAGAMLDPYGGGMSSKV---EIDSLAASLILEHFFKEGGVETAEKVIP 218
            TL +DYG+ R+G A+SVG   R +  V   GS   +  ++L     E +  IVVGLPL  +GTE E   +VRGFA+ LA         + +FLW+E  S+  A A +   G   S K    ++D++AA+L L+ F ++ GV  AE+V P
Sbjct:    4 TLAIDYGSARVGTAVSVGWMARPLD-VFPHGSIESLLARLLALCTQEQVTKIVVGLPLNADGTEGEQATVVRGFATELAQT-----TNLEIFLWNEYGSSQAAQAQM--IGASRSRKARREKLDAIAAALFLQEFVEQNGVG-AERVYP 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK7_ECTSI7.780e-11172.59YqgFc domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2ZDD4_9RHOD3.180e-2344.58Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3X7E5_EMIHU2.270e-2143.92Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S4D691_HETAK5.470e-2143.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R1ED05_EMIHU1.950e-2043.84YqgFc domain-containing protein n=2 Tax=Emiliania ... [more]
A0A7S3E813_9RHOD3.780e-1947.75Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2WGV2_9STRA2.280e-1838.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3F3A2_9EUKA3.590e-1645.59Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A8J2T1I1_9STRA9.180e-1639.85Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A838RI18_9CHLR1.970e-1538.26Putative pre-16S rRNA nuclease n=1 Tax=Ardenticate... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006641YqgF/RNase H-like domainSMARTSM00732rnase_8scoord: 71..175
e-value: 4.8E-11
score: 52.7
IPR005227Putative pre-16S rRNA nucleaseTIGRFAMTIGR00250TIGR00250coord: 74..205
e-value: 3.5E-14
score: 51.0
IPR005227Putative pre-16S rRNA nucleasePFAMPF03652RuvXcoord: 72..206
e-value: 1.9E-23
score: 83.3
IPR005227Putative pre-16S rRNA nucleasePANTHERPTHR33317FAMILY NOT NAMEDcoord: 64..212
IPR005227Putative pre-16S rRNA nucleaseHAMAPMF_00651Nuclease_YqgFcoord: 71..209
score: 16.444
IPR037027YqgF/RNase H-like domain superfamilyGENE3D3.30.420.140coord: 69..208
e-value: 2.4E-24
score: 87.9
NoneNo IPR availablePANTHERPTHR33317:SF1POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEINcoord: 64..212
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 72..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1556560..1557954 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1775.1mRNA_P-fluviatile_contig13.1775.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 1556560..1557954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1775.1 ID=prot_P-fluviatile_contig13.1775.1|Name=mRNA_P-fluviatile_contig13.1775.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=291bp
GGGAIDSTRDAGDRMERKIELHDDEQDVEDDFDDDDIHPSVAWLYPASTT
SDQSSYGSSSSSGSGRKHKKRRTLCVDYGTRRIGLAISVGISPRTVPGVS
NRGSDLEVARQVLVRARGEGIRDIVVGLPLVRNGTETEMCEIVRGFASVL
ADVGAASRPPVGVFLWDERFSTAQAGAMLDPYGGGMSSKVEIDSLAASLI
LEHFFKEGGVETAEKVIPSTGAVTAEVLLAAGRGGAGERERGGGEEDREE
DAFGEGSRRRFQEMREESARSTAARASGPTRKSPRKRRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006641YqgF/RNaseH-like_dom
IPR005227YqgF
IPR037027YqgF/RNaseH-like_dom_sf
IPR012337RNaseH-like_sf