prot_P-fluviatile_contig13.1760.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1760.1
Unique Nameprot_P-fluviatile_contig13.1760.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length771
Homology
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 7.590e-120
Identity = 321/591 (54.31%), Postives = 362/591 (61.25%), Query Frame = 0
Query:    1 MQPPFVQKTIKHGELPIWLHTNCMLYTPECFVKYPEPPTTAGATAAAKKQKPATGGDPSASTNVKVEASTSCLAGEKVRSEGGDEKSTASAISKASGGGXKXXXXGSAAAPANRKP---KPVYYGVDEARKRVALKCTSCGMQGALIGCHVQSCSINTHFACARREGWKFGEPDADGKLFLCGIHRNEGQVRFQRKAPAKKGPRKAAPKTPGKGKGGTPSSKGKXXXXXXXXXXXXXXXXX---DLKTPKAKKARRSPXXXXXXXXXXXXXGSGGSSASGTHTE----GTAPEVSKRDNGAXXXXXXXXXXXXXXXXXXVECPCGVAELEDEGYVKCNKCLVQQHLECAGTTREQLGDADGYFMCKDCAGGVNRNGNGXXNLGGGKPSTTAKQQRKPSFSGFFSGSLSGGDXXXXXXXXXREREGGPQFSSPAAGGGFKGXXXXXXXXXXXXXXXXXXXXXXXXRDPPPPSLERAWERLNNVQKKRCVMKSLEYLAQLDPSNYFAEPVDPELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLYNQDESDCFIVAQNGLDCMEDRIGRALREATQ 581
            ++PPFVQ+TIKHG+ PIWLH NCMLYTPEC V+YP      G++   KK  PA    PS +            +  K+++E                  X XXX         +KP   KPVYYGVDEARKR+ LKCTSCG QGALI CHVQSCS+ TH+ CARREGWKFG  D+DGK+FLC +HRNEGQVRF+RKAPAK+GPRK+  KTP KGKGGTP     XXXXXXXXXXX         DLK+PKAKKARRSP XXXXXXXXXXXX SG S               P V   ++G                   V+CPCGVAELE +GYV+C+ C V  HLECAGTT E + DA G F C DC      + N      GGKP   AKQ++         GSL GG XXXXXXXXX                    XXXXXXXXXXXXXXXXXXX     R     SL   W+RL++ QK RCVMK+LE LA+ DP NYFAEPV            S+PLDFSTIKKRQ +GRYAK GFS L EDISTVY NAQLYNQDESDCFIVAQ GLD M DR+GRAL EA Q
Sbjct: 2970 IRPPFVQRTIKHGDFPIWLHKNCMLYTPECSVEYPGGGGK-GSSEGGKKSAPAKDELPSTTXXXXXXXXXDATSSAKIKAETXXXXXXXXXXXXXXXXXXXXXX---------KKPPSGKPVYYGVDEARKRIGLKCTSCGKQGALIPCHVQSCSVTTHYGCARREGWKFGGHDSDGKIFLCVMHRNEGQVRFERKAPAKRGPRKSVSKTPSKGKGGTPXXXXXXXXXXXXXXXXSEPALDGDGDLKSPKAKKARRSPSXXXXXXXXXXXXESGDSKRXXXXXXXXXXARRPPVRLGEDGKPV----------------VQCPCGVAELEPQGYVQCDNCQVWLHLECAGTTAEDVEDAGGSFSCLDCV----EDANSKSPNNGGKP-PQAKQRK---------GSLGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGAPRRT---SLGEGWDRLDDQQKSRCVMKALELLAKEDPLNYFAEPV------------SNPLDFSTIKKRQKKGRYAKLGFSALREDISTVYRNAQLYNQDESDCFIVAQKGLDSMADRLGRALTEAAQ 3505          
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Match: D8UBK3_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UBK3_VOLCA)

HSP 1 Score: 70.1 bits (170), Expect = 9.740e-9
Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 0
Query:  468 RLNNVQKKRCVMKSLEYLAQLDPSNYFAEPVDPELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLYNQDESDCFIVAQNGLDCMEDRIGRAL 576
            RL  V +K C   +L+ + Q   +  F  PVD    P Y  ++SSP+DFSTIK RQ  G Y        W D+  V+ NA+ YN   SDC+++AQ   +  E++  + +
Sbjct:   81 RLAEVVQKHC-STALKSITQHKWAFPFNNPVDTARFPDYPKIISSPMDFSTIKARQDGGYYRDP--KDWWSDVMLVFSNAKRYNAPGSDCYLMAQTLQEVSEEKYDKVI 186          
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Match: A0A8J4FFL9_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4FFL9_9CHLO)

HSP 1 Score: 69.7 bits (169), Expect = 1.260e-8
Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 0
Query:  468 RLNNVQKKRCVMKSLEYLAQLDPSNYFAEPVDPELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLYNQDESDCFIVAQNGLDCMEDRIGRAL 576
            RL +V +K C   +L+ + Q   +  F  PVD    P Y  V+S+P+DFSTIK RQ  G Y        W D+  V+ NA+ YN   SDC+++AQ   +  E++  + +
Sbjct:   81 RLADVVQKHC-STALKSITQHKWAFPFNNPVDTSRFPDYPKVISTPMDFSTIKTRQDNGFYRDP--KDWWSDVMLVFSNAKRYNAPGSDCYLMAQMLQEVSEEKYDKVI 186          
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Match: A0A1D6EWT5_MAIZE (DNA-binding bromodomain-containing protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6EWT5_MAIZE)

HSP 1 Score: 66.6 bits (161), Expect = 1.310e-7
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0
Query:  468 RLNNVQKKRCVMKSLEYLAQLDPSNYFAEPVDPELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLYNQDESDCF 558
            R   +  ++ +   LE L + D    FAEPVDPE +P Y DV+  P+DFST++K+ AR  Y  + F +  +D+  +  NA  YN  ++  F
Sbjct:  212 RTTPLPDRKALEMILEKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFSTVRKKLARNAY--RSFEQFEDDVFLICSNAMQYNAPDTIYF 300          
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Match: A0A3L6FTN9_MAIZE (Bromodomain-containing protein 9 n=8 Tax=Zea mays TaxID=4577 RepID=A0A3L6FTN9_MAIZE)

HSP 1 Score: 66.6 bits (161), Expect = 1.760e-7
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0
Query:  468 RLNNVQKKRCVMKSLEYLAQLDPSNYFAEPVDPELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLYNQDESDCF 558
            R   +  ++ +   LE L + D    FAEPVDPE +P Y DV+  P+DFST++K+ AR  Y  + F +  +D+  +  NA  YN  ++  F
Sbjct:  212 RTTPLPDRKALEMILEKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFSTVRKKLARNAY--RSFEQFEDDVFLICSNAMQYNAPDTIYF 300          
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Match: Q9FIA2_ARATH (Dbj|BAA85417.1 n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9FIA2_ARATH)

HSP 1 Score: 61.2 bits (147), Expect = 2.060e-7
Identity = 29/84 (34.52%), Postives = 48/84 (57.14%), Query Frame = 0
Query:  472 VQKKRCVMKSLEYLAQLDPSNYFAEPVDPELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLYNQDES 555
            +  K+ +   L+ L + D    +AEPVDPE +P Y D++  P+DFST++K+ A G Y+     +L  D+  +  NA  YN  ++
Sbjct:   45 ILDKKSLELILDKLQKKDIYGVYAEPVDPEELPDYHDMIEHPMDFSTVRKKLANGSYST--LEELESDVLLICSNAMQYNSSDT 126          
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Match: A0A1Q3D6I1_CEPFO (Bromodomain domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3D6I1_CEPFO)

HSP 1 Score: 65.5 bits (158), Expect = 3.110e-7
Identity = 41/126 (32.54%), Postives = 64/126 (50.79%), Query Frame = 0
Query:  475 KRCVMKSLEYLAQLDPSNYFAEPVDPELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLYNQDESDCFIVAQNGLDCMEDRIGRALREATQLLPPSCSDHGGA-GATLKK 599
            K+ ++  LE L + D    F+EPVDPE +P Y D+V  P+DF T++K+   G YA     +  +DI  +  NA  YN  ++  F  A++ L+  +       +E+    PP     G   G T+KK
Sbjct:  165 KKLLVFILERLQKKDTYGVFSEPVDPEELPDYFDIVELPMDFGTVRKKLDGGAYAN--LEQFEKDILLICSNAMQYNAPDTIYFRQARSMLELAKKDFENLRQESDDSEPPKVVRRGRPPGKTVKK 288          
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Match: UPI001AAD42F7 (bromodomain adjacent to zinc finger domain protein 2A n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD42F7)

HSP 1 Score: 65.9 bits (159), Expect = 3.230e-7
Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 0
Query:  494 FAEPVDPELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLYNQDESD 556
            F EPV+P LVPGYR ++++P+DFST++ +   G Y+     +  ED   V+ N QL+N+DESD
Sbjct: 1635 FLEPVNPRLVPGYRKIITNPMDFSTMRNKLLNGGYSN--CVEFAEDAELVFRNCQLFNEDESD 1695          
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Match: A0A835AQT7_9POAL (Bromo domain-containing protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835AQT7_9POAL)

HSP 1 Score: 65.5 bits (158), Expect = 3.950e-7
Identity = 32/91 (35.16%), Postives = 51/91 (56.04%), Query Frame = 0
Query:  468 RLNNVQKKRCVMKSLEYLAQLDPSNYFAEPVDPELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLYNQDESDCF 558
            R   +  ++ +   LE L + D    FAEPVDPE +P Y DV+  P+DFST++++ AR  Y  + F +  +D+  +  NA  YN  ++  F
Sbjct:  203 RTTPLPDRKALETILEKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFSTVRRKLARNAY--RSFEQFEDDVFLICSNAMQYNAPDTIYF 291          
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Match: A0A811N4V5_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811N4V5_9POAL)

HSP 1 Score: 65.5 bits (158), Expect = 3.960e-7
Identity = 34/103 (33.01%), Postives = 54/103 (52.43%), Query Frame = 0
Query:  468 RLNNVQKKRCVMKSLEYLAQLDPSNYFAEPVDPELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLYNQDESDCFIVAQNGLDCMED 570
            R   +  ++ +   LE L + D    FAEPVDPE +P Y DV+  P+DF T++K+ AR  Y  + F +  +D+  +  NA  YN  ++  F  A+     + D
Sbjct:  208 RTTPLPDRKALEMILEKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFGTVRKKLARNAY--RSFEQFEDDVFLICSNAMQYNAPDTIYFRQARKKFQELRD 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G873_ECTSI7.590e-12054.31Chromodomain-helicase-DNA-binding protein 8 n=2 Ta... [more]
D8UBK3_VOLCA9.740e-935.78Uncharacterized protein (Fragment) n=1 Tax=Volvox ... [more]
A0A8J4FFL9_9CHLO1.260e-835.78Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A1D6EWT5_MAIZE1.310e-736.26DNA-binding bromodomain-containing protein n=2 Tax... [more]
A0A3L6FTN9_MAIZE1.760e-736.26Bromodomain-containing protein 9 n=8 Tax=Zea mays ... [more]
Q9FIA2_ARATH2.060e-734.52Dbj|BAA85417.1 n=1 Tax=Arabidopsis thaliana TaxID=... [more]
A0A1Q3D6I1_CEPFO3.110e-732.54Bromodomain domain-containing protein n=1 Tax=Ceph... [more]
UPI001AAD42F73.230e-746.03bromodomain adjacent to zinc finger domain protein... [more]
A0A835AQT7_9POAL3.950e-735.16Bromo domain-containing protein n=2 Tax=Digitaria ... [more]
A0A811N4V5_9POAL3.960e-733.01Hypothetical protein n=1 Tax=Miscanthus lutariorip... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 539..558
score: 28.48
coord: 503..519
score: 39.39
coord: 489..502
score: 30.59
IPR001487BromodomainSMARTSM00297bromo_6coord: 467..577
e-value: 9.7E-10
score: 48.4
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 482..559
e-value: 4.9E-14
score: 52.2
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 486..558
score: 15.135
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 133..183
e-value: 0.9
score: 18.2
coord: 311..359
e-value: 0.95
score: 18.0
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 454..582
e-value: 1.2E-19
score: 72.3
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 457..577
NoneNo IPR availablePFAMPF13771zf-HC5HC2Hcoord: 125..182
e-value: 7.4E-8
score: 32.5
NoneNo IPR availablePANTHERPTHR22881BROMODOMAIN CONTAINING PROTEINcoord: 202..716
NoneNo IPR availablePANTHERPTHR22881:SF11SWI/SNF NUCLEOSOME REMODELING COMPLEX COMPONENTcoord: 202..716
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 108..185
e-value: 6.6E-11
score: 44.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 295..365
e-value: 2.7E-9
score: 38.3
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 312..358
IPR034732Extended PHD (ePHD) domainPROSITEPS51805EPHDcoord: 1..183
score: 8.617
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 307..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1438226..1443653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1760.1mRNA_P-fluviatile_contig13.1760.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 1437615..1443653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1760.1 ID=prot_P-fluviatile_contig13.1760.1|Name=mRNA_P-fluviatile_contig13.1760.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=771bp
MQPPFVQKTIKHGELPIWLHTNCMLYTPECFVKYPEPPTTAGATAAAKKQ
KPATGGDPSASTNVKVEASTSCLAGEKVRSEGGDEKSTASAISKASGGGG
KDGKDGSAAAPANRKPKPVYYGVDEARKRVALKCTSCGMQGALIGCHVQS
CSINTHFACARREGWKFGEPDADGKLFLCGIHRNEGQVRFQRKAPAKKGP
RKAAPKTPGKGKGGTPSSKGKAKGGGDGGDGGGDATGDDLKTPKAKKARR
SPSSAAAPAAAPAAVGSGGSSASGTHTEGTAPEVSKRDNGAGAGSKGVGS
GGGGASSSKVECPCGVAELEDEGYVKCNKCLVQQHLECAGTTREQLGDAD
GYFMCKDCAGGVNRNGNGNGNLGGGKPSTTAKQQRKPSFSGFFSGSLSGG
DGCGGGAGSGREREGGPQFSSPAAGGGFKGKGKGSGGGGGNSGGAVREGD
GNGTRDPPPPSLERAWERLNNVQKKRCVMKSLEYLAQLDPSNYFAEPVDP
ELVPGYRDVVSSPLDFSTIKKRQARGRYAKQGFSKLWEDISTVYHNAQLY
NQDESDCFIVAQNGLDCMEDRIGRALREATQLLPPSCSDHGGAGATLKKL
RPGAGGGRGGGGAVGAVESSGGGGGARDDSAMEQEDSEDGSVEEQDSDSD
EDFEAPYLARRGVAGRLPTTAAPRHVPPARAGAGADHSEYGDEEAGEEEE
EEEEEGEENAAAAAAAAGNRGARWASPRGSSDGGSSGGGGGAGSDHGGGY
YDDGEDSDTMPPSQSKRQRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR001965Znf_PHD
IPR036427Bromodomain-like_sf
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR034732EPHD
IPR011011Znf_FYVE_PHD