prot_P-fluviatile_contig13.1618.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig13.1618.1
Unique Name	prot_P-fluviatile_contig13.1618.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	202

Homology

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BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Match: D7FNV2_ECTSI (Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNV2_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 3.210e-135
Identity = 197/201 (98.01%), Postives = 198/201 (98.51%), Query Frame = 0

Query:    1 PISDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVAGGGSGGGCC 201
            P  DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV+G GSGGGCC
Sbjct:    3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 203

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BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Match: A0A836CKR4_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR4_9STRA)

HSP 1 Score: 347 bits (890), Expect = 5.620e-120
Identity = 174/201 (86.57%), Postives = 186/201 (92.54%), Query Frame = 0

Query:    1 PISDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVAGGGSGGGCC 201
            P  DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD++SF NVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAK FAD+LGIEFLETSAKNA+NV+ AFM M++ IK RMK+QPT   +GGT+LT S QV+GG + GGCC
Sbjct:    3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDSFQNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKEFADSLGIEFLETSAKNATNVDSAFMTMSAAIKGRMKTQPTAGAKGGTKLTPSAQVSGGATSGGCC 203

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BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Match: A0A835YQS3_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS3_9STRA)

HSP 1 Score: 344 bits (882), Expect = 9.630e-119
Identity = 173/202 (85.64%), Postives = 185/202 (91.58%), Query Frame = 0

Query:    1 PISDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVAGGGSGG-GCC 201
            P  DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+ELD KT+KLQIWDTAGQERFRTIT+SYYRGAHGIIVVYDVTD+ESFNNVKQWL EI+RYACENVNKLLVGNKSDLEAKRAVTTEE K FAD++GIEFLETSAKNA NVEKAF+MM+ QIK RMK+ P G  +GGTRLTA  QV GGG+GG GCC
Sbjct:    3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKTVKLQIWDTAGQERFRTITASYYRGAHGIIVVYDVTDRESFNNVKQWLTEIERYACENVNKLLVGNKSDLEAKRAVTTEEGKEFADSIGIEFLETSAKNADNVEKAFLMMSQQIKGRMKTAPAGGAKGGTRLTAGEQVGGGGAGGSGCC 204

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BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Match: W7TST3_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST3_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.720e-114
Identity = 169/198 (85.35%), Postives = 181/198 (91.41%), Query Frame = 0

Query:    4 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVAGGGSGGGCC 201
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL+ KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEI+RYA ENVNKLLVGNKSDLE KR V+TE AK FAD+LGI FLETSAKN++NVEKAF+ MASQIK+RMK+QP G   GGT+LTAST V G G+  GCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEINRYASENVNKLLVGNKSDLEPKRVVSTETAKEFADSLGIAFLETSAKNSTNVEKAFLTMASQIKARMKTQPVGPKTGGTKLTASTAVGGPGASSGCC 203

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BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycota TaxID=4762 RepID=YPT1_PHYIN)

HSP 1 Score: 323 bits (829), Expect = 1.030e-110
Identity = 168/201 (83.58%), Postives = 178/201 (88.56%), Query Frame = 0

Query:    1 PISDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVAGGGSGGGCC 201
            P  DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  AP+ G +LT   QV   G G  CC
Sbjct:    3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQVPSNG-GSKCC 201

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BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Match: K3W769_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3W769_GLOUD)

HSP 1 Score: 322 bits (826), Expect = 2.950e-110
Identity = 169/201 (84.08%), Postives = 178/201 (88.56%), Query Frame = 0

Query:    1 PISDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVAGGGSGGGCC 201
            P  DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+TE AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + PT AP+   +L   T V   G GG CC
Sbjct:    3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTEAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPT-APKPTLKLNQGTNVQQNG-GGKCC 201

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BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Match: A0A140YWP8_PHYNI (Ras-related protein (Fragment) n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A140YWP8_PHYNI)

HSP 1 Score: 320 bits (820), Expect = 1.970e-109
Identity = 162/188 (86.17%), Postives = 173/188 (92.02%), Query Frame = 0

Query:    4 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 191
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSA+NA+NVEKAFMMMA+QIK RM + P  AP+ G +LT   QV
Sbjct:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSARNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQV 187

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BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Match: A0A6A3UIH2_9STRA (Ras-like GTP-binding protein n=90 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UIH2_9STRA)

HSP 1 Score: 322 bits (826), Expect = 3.330e-109
Identity = 164/191 (85.86%), Postives = 174/191 (91.10%), Query Frame = 0

Query:    1 PISDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 191
            P  DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  AP+ G +LT   QV
Sbjct:    3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQV 192

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BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Match: A0A140YWQ0_PHYNI (Ras-related protein (Fragment) n=4 Tax=Phytophthora TaxID=4783 RepID=A0A140YWQ0_PHYNI)

HSP 1 Score: 319 bits (817), Expect = 5.630e-109
Identity = 162/188 (86.17%), Postives = 172/188 (91.49%), Query Frame = 0

Query:    4 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 191
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ A+ FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  APR G +LT    V
Sbjct:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAQEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APRAGVKLTPGQHV 187

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BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Match: A0A067C976_SAPPC (Ras-like GTP-binding protein YPT1 n=11 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C976_SAPPC)

HSP 1 Score: 317 bits (811), Expect = 5.500e-108
Identity = 166/201 (82.59%), Postives = 175/201 (87.06%), Query Frame = 0

Query:    1 PISDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVAGGGSGGGCC 201
            P  DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FAD+LGIEFLETSAKNA+NVEKAFMMMA+QIK RM S P  + +    L     V+G    GGCC
Sbjct:    3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKDFADSLGIEFLETSAKNAANVEKAFMMMAAQIKKRMASAPMQS-KPAISLQPGQNVSG--KSGGCC 200

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig13.1618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FNV2_ECTSI	3.210e-135	98.01	Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A836CKR4_9STRA	5.620e-120	86.57	Ras related protein PiYpt1 n=1 Tax=Tribonema minus...	[more]
A0A835YQS3_9STRA	9.630e-119	85.64	Ras related protein PiYpt1 n=1 Tax=Tribonema minus...	[more]
W7TST3_9STRA	1.720e-114	85.35	Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=42...	[more]
YPT1_PHYIN	1.030e-110	83.58	Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycot...	[more]
K3W769_GLOUD	2.950e-110	84.08	Uncharacterized protein n=4 Tax=Oomycota TaxID=476...	[more]
A0A140YWP8_PHYNI	1.970e-109	86.17	Ras-related protein (Fragment) n=4 Tax=Peronospora...	[more]
A0A6A3UIH2_9STRA	3.330e-109	85.86	Ras-like GTP-binding protein n=90 Tax=Phytophthora...	[more]
A0A140YWQ0_PHYNI	5.630e-109	86.17	Ras-related protein (Fragment) n=4 Tax=Phytophthor...	[more]
A0A067C976_SAPPC	5.500e-108	82.59	Ras-like GTP-binding protein YPT1 n=11 Tax=Saprole...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 48..70 score: 56.42 coord: 145..167 score: 43.84 coord: 30..46 score: 35.4 coord: 110..123 score: 55.32 coord: 7..28 score: 56.84
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 2..171 e-value: 0.0042 score: 0.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 1.2E-108 score: 377.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..201 e-value: 1.0E-6 score: 38.3
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 9..170 e-value: 1.6E-14 score: 64.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 1.2E-36 score: 137.8
None	No IPR available	GENE3D	3.40.50.300		coord: 2..190 e-value: 6.1E-74 score: 249.7
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 3..177
None	No IPR available	PANTHER	PTHR24073:SF963	RAS-RELATED PROTEIN RAB-1A	coord: 3..177
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..201 score: 38.784
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 5..163 e-value: 1.4E-34 score: 117.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..168 e-value: 3.5E-67 score: 225.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..181

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig13	contig	P-fluviatile_contig13:34756..37938 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig13.1618.1	mRNA_P-fluviatile_contig13.1618.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig13 34756..37938 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig13.1618.1 ID=prot_P-fluviatile_contig13.1618.1|Name=mRNA_P-fluviatile_contig13.1618.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=202bp
PISDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL
DSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQW
LHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSA
KNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVAGGGSGGGC
C*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase