prot_P-fluviatile_contig12.1540.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1540.1
Unique Nameprot_P-fluviatile_contig12.1540.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length436
Homology
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BLAST of mRNA_P-fluviatile_contig12.1540.1 vs. uniprot
Match: A0A6H5JWH9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH9_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 5.230e-13
Identity = 119/412 (28.88%), Postives = 155/412 (37.62%), Query Frame = 0 
Query:   27 KFRRSCDACSVAKRKCDGEVTCSLCKKRRRPCVYGERQKSGPKRKKTSATQLSGEAAAVAAPTSSARTNKKHSATPWPKVGKCSATASSTAGWQQPLKQHRRPAEQQTEASPPASPQTTLPAATATAGPTAADKTIVAAAGSTXXXXTVLPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQRAVAKKEPRPQIQQKTT-----AAVGRATDAGAVRSYATFP---TAVDAGGKPPPFEPRFPPFLPLGPSPDALAFSVRAPAAVRTV---YSPLLRMMPRLGGDGGGGEVEHPPVSVT-SEACADRASSSPGWEDVPDVFVSAPEEEALWSCDDLSDDGLGGAQTSTGVSVGVGGGVDMDTAGEVKSSARGCLLGFPPKVETALRPTVEMILLEDYRPALPLAPRPLPR 426
            K RRSCDAC++AKR+CDGE+ C LC K+   CVY  RQKSGPK  K  A  ++  A A                                                  +  PP +P    P+ TA   P          A  +      L +P                           +HP + VA+KEPRP+  +K        AV     A A  +    P   TA     +  P  P  P   P      +LA S ++ AA  TV   ++PL RM+PR G            VS   S +  D +SSS  W+DV DVFVS+ E++ LWSCDD SDD       S GV+         D            L   P  +E  L  T +  +L   + A   APRP  R
Sbjct:   23 KMRRSCDACALAKRRCDGELRCLLCCKKSIRCVYSTRQKSGPKGHKAPAESVA--ATATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTVPPGTPADLAPSPTAPVAP----------ASPSLSKGQQLAAPGR-------------------------RHPSQQVARKEPRPRHHRKDADGKEIPAVKSPAPAAAAANAVVSPSNGTATSRFARQQPVAPALPAQFP------SLARS-KSSAAEETVGGKFAPLPRMVPRRGSS----------VSAPGSGSSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWASVGVASDNRSPGGFDWIPSYVEENATPLNDAPKALEAILMATEQASVLTTDQTATTAAPRPAGR 380
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BLAST of mRNA_P-fluviatile_contig12.1540.1 vs. uniprot
Match: D7G8Z3_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z3_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.820e-8
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0 
Query:   27 KFRRSCDACSVAKRKCDGEVTCSLCKKRRRPCVYGERQKSGPKRKKT 73
            K RRSCDAC++AKR+CDGE+ CSLC K+   CVY  RQKSGPK  KT
Sbjct:   23 KMRRSCDACALAKRRCDGELRCSLCCKKSIRCVYSTRQKSGPKGHKT 69
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWH9_9PHAE5.230e-1328.88Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G8Z3_ECTSI1.820e-868.09Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 26..69
e-value: 0.0036
score: 26.5
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 30..65
e-value: 3.9E-5
score: 23.7
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 31..58
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 31..60
score: 8.632
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 23..84
e-value: 4.3E-8
score: 35.0
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 25..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:2801206..2803410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1540.1mRNA_P-fluviatile_contig12.1540.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 2797991..2803490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1540.1 ID=prot_P-fluviatile_contig12.1540.1|Name=mRNA_P-fluviatile_contig12.1540.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=436bp
MRPRTMPTPKEGRKRARAACSVSIVPKFRRSCDACSVAKRKCDGEVTCSL
CKKRRRPCVYGERQKSGPKRKKTSATQLSGEAAAVAAPTSSARTNKKHSA
TPWPKVGKCSATASSTAGWQQPLKQHRRPAEQQTEASPPASPQTTLPAAT
ATAGPTAADKTIVAAAGSTTAAATVLPSPAPSPLAAVAALPVPNKETADA
TAAAPKQHPQRAVAKKEPRPQIQQKTTAAVGRATDAGAVRSYATFPTAVD
AGGKPPPFEPRFPPFLPLGPSPDALAFSVRAPAAVRTVYSPLLRMMPRLG
GDGGGGEVEHPPVSVTSEACADRASSSPGWEDVPDVFVSAPEEEALWSCD
DLSDDGLGGAQTSTGVSVGVGGGVDMDTAGEVKSSARGCLLGFPPKVETA
LRPTVEMILLEDYRPALPLAPRPLPRLPTSCRTSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf