prot_P-fluviatile_contig12.1501.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1501.1
Unique Nameprot_P-fluviatile_contig12.1501.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length672
Homology
BLAST of mRNA_P-fluviatile_contig12.1501.1 vs. uniprot
Match: A0A6H5KS31_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS31_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 2.050e-46
Identity = 136/244 (55.74%), Postives = 150/244 (61.48%), Query Frame = 0
Query:  414 MLDGLRGGPGAXXXXXXXXXXHSGGMMPPSPYNGPQMSXXXXXXQVP-AALMGGMPPLTPELHS---MGYQLDTRNLPQLPPPDPRFDMRGMGSMGAEQQ----RGGG----DSHSRVVAESLYYPGQ-QGLGGQGYGLDPRYPRVLQSPRGPTGYGDPM-AGLYGQHESQHHQQQTPASPMVASRR--LPHDLISGGVXXXXXXXXXXXXSG----RTRGRGGGHMDAGSMMSSPRIGAADPY 637
            M+DGLRG   A          H+GGMMPPSPYNG QMS      Q+P AALMGGMPPLTPELH+   MGYQLD R+LPQLPPPDPR+D R     G +QQ    RGGG     +H R   +  YY GQ QG GGQGYGLDPRYPRV  SPRGPTGY DPM AG+ G +  Q                  LPHDL     XXXXXXXXXXXX      R RGRG GH ++   M SPR+GAADPY
Sbjct:    1 MMDGLRG---AAIASGAGIGLHAGGMMPPSPYNGSQMSPYGAPQQMPQAALMGGMPPLTPELHAGSTMGYQLDARHLPQLPPPDPRYDTR---MQGDQQQHGSLRGGGADASSAHLRGSTDGSYYRGQHQGAGGQGYGLDPRYPRVHHSPRGPTGYPDPMVAGVGGMYAEQXXXXXXXXXXXXXXXXXXLPHDLXXXXXXXXXXXXXXXXXXXXXXXRMRGRGAGHPESSVGMMSPRMGAADPY 238          
BLAST of mRNA_P-fluviatile_contig12.1501.1 vs. uniprot
Match: D7FWZ0_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ0_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 5.260e-43
Identity = 102/171 (59.65%), Postives = 110/171 (64.33%), Query Frame = 0
Query:  411 SHHMLDGLRGGPGAXXXXXXXXXXHSGGMMPPSPYNGPQMSXXXXXXQVP-AALMGGMPPLTPELHS---MGYQLDTRNLPQLPPPDPRFDMRGMGSMGAEQQRGGG-----DSHSRVVAESLYYPGQQ-GLGGQ-GYGLDPRYPRVLQSPRGPTGYGDPMAGLYGQHESQ 570
            SHHM+DG RG   A          H+GGMMPPSPYNG QMS      Q+P AALMGGMPPLTPELH+   MGYQLD R+LPQLPPPDPR+D R  G        GGG      +H R   +  YY GQQ G GGQ GYGLDPRYPRV QSPRGPTGY DPMA   G H  Q
Sbjct:   49 SHHMMDGSRG---AATASGAGIGLHAGGMMPPSPYNGSQMSPYGAPQQMPQAALMGGMPPLTPELHAGSTMGYQLDARHLPQLPPPDPRYDTRMQGDQQQRGSLGGGGADASSAHLRGSTDGSYYRGQQQGAGGQQGYGLDPRYPRVHQSPRGPTGYPDPMAAGGGGHTVQ 216          
BLAST of mRNA_P-fluviatile_contig12.1501.1 vs. uniprot
Match: D7FWZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWZ2_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 8.120e-12
Identity = 85/166 (51.20%), Postives = 93/166 (56.02%), Query Frame = 0
Query:    1 MNINVIGGGHGLGSGGLASXXXXXXXXXXDTASPSPPIAGAAFGSSAAIASSANGGGGLPSGRSRSPGFDVDHKTTXXXXXXXXXXXXXXXXXXXFLVGAT-------GSDRDGVGDGGWLGXXXXXXDADDRSV----AGRKDVDHAFAGAMLQRSTSAPPVSDH 155
            MNINVIGGGHGLGSG  A            T S               +A+S++ GG LPSGRSRSPGFDVD  TTXXXXXXXXXXXXXXXXXX    GAT       G+         WLG       +         +   +VDHAFAGAMLQRSTSAPPVSDH
Sbjct:   20 MNINVIGGGHGLGSGLSAGDKSAAGD---STVSXXXXXXXXXXXXXXXMATSSSNGG-LPSGRSRSPGFDVDKPTTXXXXXXXXXXXXXXXXXX--XAGATVVTGSAPGAXXXXXXXXXWLGAGDGFAGSXXXXXXXXXSSSNNVDHAFAGAMLQRSTSAPPVSDH 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KS31_9PHAE2.050e-4655.74PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FWZ0_ECTSI5.260e-4359.65PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FWZ2_ECTSI8.120e-1251.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:2414301..2425838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1501.1mRNA_P-fluviatile_contig12.1501.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 2403873..2425893 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1501.1 ID=prot_P-fluviatile_contig12.1501.1|Name=mRNA_P-fluviatile_contig12.1501.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=672bp
MNINVIGGGHGLGSGGLASGGGDKSTGAGDTASPSPPIAGAAFGSSAAIA
SSANGGGGLPSGRSRSPGFDVDHKTTSSSSASAAAAAAAASSAAAFLVGA
TGSDRDGVGDGGWLGGGGGGGDADDRSVAGRKDVDHAFAGAMLQRSTSAP
PVSDHVDGWPRRAPPPTGGDAVDSDYYYYYHAPTSINPRLAGSSRDGIGG
GGTGAASSRHLAAPIAQQSHAHSILETTSSSAAGAGRDGSGSSSGRTSPL
STVAEQQQQQRNMVNGGTAAGSGSGADEPGRAQTGTGGVAAIGGGGDSSS
SGNNNGPSAARGAVGRPALEPAMGAGRYGRGPGDGSLNHPQQQQQQQQAQ
FAGSQHRDGYGNSGGVDGDFAGAMGSLSLGPGGGGGKGLQYGGGARSSRM
DPYGGGANNNSHHMLDGLRGGPGAGPGGGMGLGLHSGGMMPPSPYNGPQM
SPYGGPQQVPAALMGGMPPLTPELHSMGYQLDTRNLPQLPPPDPRFDMRG
MGSMGAEQQRGGGDSHSRVVAESLYYPGQQGLGGQGYGLDPRYPRVLQSP
RGPTGYGDPMAGLYGQHESQHHQQQTPASPMVASRRLPHDLISGGVGGGG
YYGGGGGGSGRTRGRGGGHMDAGSMMSSPRIGAADPYYPGGEMGVYGSGS
GSGGGGGRIHGWQRRPRRAGG*
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