prot_P-fluviatile_contig12.1498.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig12.1498.1
Unique Name	prot_P-fluviatile_contig12.1498.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	182

Homology

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BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 1.160e-117
Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0

Query:    1 MKMAFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVLGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 181
            MKM+FESEIGAQPPLGFWDPLGLLADADQERFERLRYVE+KHGRI+MLA+ GHLT QNVRLPGMLS SANLSFADMPNGVAALSKIPPAGLAQI AFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILA+MVHE+L+N+PYIINDL+GASYTFN
Sbjct:   38 MKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218

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BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 3.540e-115
Identity = 164/181 (90.61%), Postives = 175/181 (96.69%), Query Frame = 0

Query:    1 MKMAFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVLGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 181
            MKM+FESEIGAQPPLGFWDPLGLLADADQERFERLRYVE+KHGRI+MLA+ GHLT QNVRLPGMLS SA+LSFADMPNGVAALSKIPPAGLAQI AFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL+GA YTFN
Sbjct:   41 MKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221

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BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 328 bits (841), Expect = 1.200e-112
Identity = 161/181 (88.95%), Postives = 172/181 (95.03%), Query Frame = 0

Query:    1 MKMAFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVLGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 181
            MKM+FESEIGAQ PLGFWDPLGLLADADQERFERLRYVE+KHGRI+MLA+ GHLT QN RLPGMLS SANLSFADMPNGVAALSKIPPAGLAQI AF+GFLELAVMKNVEGSFPGDFT GGNPF +SWDAMSEETQ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDLVGASYTFN
Sbjct:   37 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217

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BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 2.800e-112
Identity = 159/181 (87.85%), Postives = 170/181 (93.92%), Query Frame = 0

Query:    1 MKMAFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVLGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 181
            MKM+FESEIGAQPPLGFWDPLGLL DADQERFERLRYVE+KHGRI+MLA+ GHLT QN RLPGMLS SANLSFADMPNGVAALSKIPPAGLAQI AF+GFLELAVMKNVEGSFPGDFT GGNPF SSWDAMSEETQ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL+GA Y FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181

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BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 325 bits (832), Expect = 8.300e-112
Identity = 159/181 (87.85%), Postives = 170/181 (93.92%), Query Frame = 0

Query:    1 MKMAFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVLGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 181
            MKM+FE EIGAQ PLGFWDPLGLLADADQERFERLRYVE+KHGRI+MLA+ GHLT QN RLPGMLS SANLSFADMPNGVAALSKIPP GLAQI  F+GFLELAVMKNVEGSFPGDFT GGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL+GASY FN
Sbjct:    2 MKMSFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182

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BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 322 bits (825), Expect = 2.670e-110
Identity = 159/181 (87.85%), Postives = 167/181 (92.27%), Query Frame = 0

Query:    1 MKMAFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVLGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 181
            MKM+FESEIGAQ PLGFWDPLGLLADADQERFERLRYVE+KHGRI+MLA+ GHLT QN RLPGMLS SANLSFADMPNGVAALSKIPP GLAQI  F+GFLELAVMKNVEGSFPGDF  GGNPFASSWD+MS ETQ SKRAIELNNGRAAQMGIL MMVHE+LSNQPYI NDL+GASYTFN
Sbjct:   31 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211

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BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 3.800e-110
Identity = 160/181 (88.40%), Postives = 171/181 (94.48%), Query Frame = 0

Query:    1 MKMAFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVLGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 181
            MKM+FESEIGAQPPLGFWDPLGLL DADQERFERLRYVE+KHGRI+MLA+ GHLT QN RLPGMLS SANLSFADMPNGVAALSKIPPAGLAQI AF+GFLELAVMKNVEGSFPGDFT GGNPF SSWDAMSEETQ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL+GA YTFN
Sbjct:  197 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377

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BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 313 bits (801), Expect = 1.440e-106
Identity = 154/181 (85.08%), Postives = 166/181 (91.71%), Query Frame = 0

Query:    1 MKMAFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVLGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 181
            MKM+FESEIGAQ PLGFWDPLGLL DADQ+ FERLRYVE+K GRI+MLA+ GHLT QN RLPGMLS SANLSFADMPNGVAALSKIPP GLAQI  F+GFLELAVMKNVEGSFPGDFT GGNPFASSWDAMS ETQ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL+GASY FN
Sbjct:   36 MKMSFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216

[Close]

BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Match: A0A6H5KBS3_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS3_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 1.990e-97
Identity = 149/206 (72.33%), Postives = 163/206 (79.13%), Query Frame = 0

Query:    1 MKMAFESEIGAQPPLGFWDPLGLLADA-------------------------DQERFERLRYVEIKHGRISMLAVLGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 181
            MKM+FESE+GAQPPLGF+DPLGLL D                          DQERF+RLRYVE+KHGRISMLAV GHL AQN R PG LS  A L+FADMPNGVAA+SKIPP GLAQIVAF+GFLEL VMKNVEGSFPGD T GGNPFA+ WDAMSEET+ SKRAIELNNGRAAQMGILAMM+HE++SNQPYIINDL+ A YTFN
Sbjct:    1 MKMSFESELGAQPPLGFFDPLGLLIDQVVPQLPPSCQSSLLVICADGLEPWEDQERFDRLRYVEVKHGRISMLAVAGHLVAQNYRFPGYLSYDAKLTFADMPNGVAAISKIPPLGLAQIVAFIGFLELNVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMIHEEISNQPYIINDLLNAPYTFN 206

[Close]

BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Match: FCPE_MACPY (Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=FCPE_MACPY)

HSP 1 Score: 289 bits (740), Expect = 2.440e-97
Identity = 143/181 (79.01%), Postives = 157/181 (86.74%), Query Frame = 0

Query:    1 MKMAFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVLGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 181
            MKM+FESEIGAQPP+GFWDPLGL+ADADQERF+RLRYVEIKHGRI+MLAV+GH+T QN RLPGMLS   NL+FAD PNGVAA SKIPP G  QI+  +G  EL V+K VEGSFPGD T GGN F S+WD MSEETQ SKRAIELNNGRAAQMGILAMMVHE+LSNQPYIINDL GA+Y FN
Sbjct:   32 MKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQIILAIGCHELFVVKQVEGSFPGDCTTGGNIFQSAWDNMSEETQASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYQFN 212

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig12.1498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KCX6_9PHAE	1.160e-117	92.82	LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
A0A6H5JHT6_9PHAE	3.540e-115	90.61	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
FCPB_MACPY	1.200e-112	88.95	Fucoxanthin-chlorophyll a-c binding protein B, chl...	[more]
A0A6H5JDS8_9PHAE	2.800e-112	87.85	LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
FCPD_MACPY	8.300e-112	87.85	Fucoxanthin-chlorophyll a-c binding protein D, chl...	[more]
FCPF_MACPY	2.670e-110	87.85	Fucoxanthin-chlorophyll a-c binding protein F, chl...	[more]
D8LNK6_ECTSI	3.800e-110	88.40	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
FCPC_MACPY	1.440e-106	85.08	Fucoxanthin-chlorophyll a-c binding protein C, chl...	[more]
A0A6H5KBS3_9PHAE	1.990e-97	72.33	LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
FCPE_MACPY	2.440e-97	79.01	Fucoxanthin-chlorophyll a-c binding protein E, chl...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 9..161 e-value: 8.9E-33 score: 114.1
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 7..177 e-value: 2.8E-25 score: 91.2
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..165
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 2..165
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 2..171

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig12	contig	P-fluviatile_contig12:2377981..2378526 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig12.1498.1	mRNA_P-fluviatile_contig12.1498.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig12 2377930..2379686 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig12.1498.1 ID=prot_P-fluviatile_contig12.1498.1|Name=mRNA_P-fluviatile_contig12.1498.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=182bp
MKMAFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAV
LGHLTAQNVRLPGMLSTSANLSFADMPNGVAALSKIPPAGLAQIVAFVGF
LELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAA
QMGILAMMVHEKLSNQPYIINDLVGASYTFN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022796	Chloroa_b-bind
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR001344	Chloro_AB-bd_pln