prot_P-fluviatile_contig12.1390.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1390.1
Unique Nameprot_P-fluviatile_contig12.1390.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1050
Homology
BLAST of mRNA_P-fluviatile_contig12.1390.1 vs. uniprot
Match: D8LDJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ6_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.910e-52
Identity = 231/663 (34.84%), Postives = 270/663 (40.72%), Query Frame = 0
Query:  213 GDRGGACSASDGGCKNGNSXXXXXXXXXXDRWAAQTIGVXXXXXXXXXXXXXXXXXXXXCGSKTIGDQVPDVREDSMRCVGNNACVPRPAGMGSDANSGDDPEECGGVRSVENISEGAGASCAAGEIPSSAAFGGGVDYSV-GDACSVGPALTASGVDGRSVTTALYGGKKRSIVTRKERVVHEELLGSPGNGQGLGGLDERQVIGTAAATAAASSYPSSADVHIADNLEHGLRRGEEGDVLNEATAAAAATPAVYPYSTPPPQEDHQLL------SPAATKPPAQERRGPLVKGDGADFNTNRRAPAAVAGSEAGVKNAGGYEDGSGTGGGRRLQGGGDATG-------LGKGAAGDXXGRRGEEWEGDEE-------------NMAESAVAGNGRRWPSWRSFVFALLLCAVLLGTYTRGTLLGWLPLLVRSSREGWALDLDSAIACARSRASSFCSAGGPAAVFPGDTADDPDLPELISDDEG--DGNGDSXXXXXXXXXXXXXXXXXXXXXXXXGAPLMWDTRPKPDDYLVFHPVLGVVPAGAVRAWGGEGRGGWTAGRTPGNRERKAAEAVETVATGMTVGAGXXXXXXXAGIGSAVNGGPGTSCWESWCSSSSLPRRGAGVSGETSTAKAFAVNGKGKQLPPVRYTKEWFEWVAARE 846
            GD  GACSA+ GG  NGN             W  Q  GV                       KTIG  VPD+ +DS  C G   CV  PA       +G+  E                           A  GGGV  S  G    +  A             A  G  + SI     RV  +E   S  +G+G    D R        TAAAS         +AD    G +  +   V   AT A AA    YP S PP   +   L      + A  +PP QE+RGPLVKG GA+ NT  R    V    A     G    G+   G R  +      G       +G        GRR  E                    + E+A+ G G+ WPSWR+F   LLL A++LGT+ RG++  WLP      R+ WA+DLDSAIA ARSRA SFCS  G A+VF GD  DD DLP+LISD E   DGNGD                           PLMWD RPKPDDYLVFHPVLGVVPAG VRAWGG+G GGW   R         AEA      G   G                 GG G  C     S SS PR     +  +S A A A   KGKQLPP     EW EW+A  E
Sbjct:   99 GDGEGACSANGGG--NGNKGVRSNGKP----WDGQAWGVPAPALEPSCHLSDRSSDAYPGAVKTIGGTVPDILQDSSWCAGGEDCVLPPA-----TGAGNKKE---------------------------AVRGGGVGGSQEGTGSCIDAAXXXXXXXXXXEAAACRG--ESSIPGDAGRVPDDEARASS-SGEGPPRRDGRFTT-----TAAAS---------LADFTTAGPKEQQSRLVDGYATIATAA----YPQSRPPSTTEQSSLPTEARPTVATERPPQQEQRGPLVKGQGANTNTRDRDTGGVKHPGATAVVHGDGRTGATDEGARAEE---PTPGRWNRHAKVGPTGGSKGKGRRERELPAXXXXXXXXXXXXXXXXGVLETAIVG-GKAWPSWRAFACILLLSALVLGTFLRGSIPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCS--GRASVFSGDPVDDSDLPDLISDSEEGEDGNGDQGVVPGDDDGE---------------TPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGCGGWGGVR---------AEAAGARVGGTNGG----------------TGGKGCGC----SSKSSSPRSALAPAAVSSKAIAVAGVVKGKQLPP----DEWPEWLAMME 648          
BLAST of mRNA_P-fluviatile_contig12.1390.1 vs. uniprot
Match: A0A6H5LRF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRF5_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 2.640e-50
Identity = 177/421 (42.04%), Postives = 207/421 (49.17%), Query Frame = 0
Query:  456 ATAAAAATPAVYPYSTPPPQEDHQLL-----SPAATKPPAQERRGPLVKGDGADFNTNRRAPAAVA--GSEA---GVKNAGGYEDGS----------------GTGGGRRLQGGGDATGLGKGAAGDXXGRRGEEWEGDEENMAESAVAGNGRRWPSWRSFVFALLLCAVLLGTYTRGTLLGWLPLLVRSSREGWALDLDSAIACARSRASSFCSAGGPAAVFPGDTADDPDLPELISD-DEGDGNGDSXXXXXXXXXXXXXXXXXXXXXXXXGAPLMWDTRPKPDDYLVFHPVLGVVPAGAVRAWGGEGRGGWTAGRTPGNRERKAAEAVETVATGMTVGAGXXXXXXXAGIGSAVNGGPGTSCWESWCSSSSLPRRGAGVSGETSTAKAFAVNG--KGKQLPPVRYTKEWFEWVAAREA 847
            AT A AA    YP S PP   +   L     + AA +PP QE+RGPLVKG GA+ NT  R    V   G+ A   G +  G  ++G+                G  GG + QG  +   L  G  G   GRR E   G E    E+ + G G+ WPSWR+F   LLL A+ L T+ RG++  WLP      R+ WA DLDSAIA ARSRA SFCS  G A+VF GD  DD DLP LISD +EG+   D+                         APLMWD RPKPDDYL+FHPVLGVVPAG VRAWGG+G GGW      G    +AA A      G T G G                          CSS S   RGA      S+ KA AV G  KGKQLPP     EW EW+AAR A
Sbjct:  286 ATIATAA----YPQSRPPTTTEQSSLPAARPTVAAERPPQQEQRGPLVKGQGANINTRDRDTGGVKHPGATAVVHGERRTGASDEGARAEEPTPGRWNRNANVGPTGGSKEQGRREIE-LSAGTGG--RGRRSEN-RGGEGGGLETGIVG-GKSWPSWRTFACILLLSALGLSTFLRGSMPHWLPFFGGGRRQRWAKDLDSAIAHARSRAGSFCS--GRASVFSGDPVDDSDLPGLISDSEEGEDGNDTQGVVPGDDDGE--------------APLMWDRRPKPDDYLIFHPVLGVVPAGVVRAWGGDGCGGW------GGVRAEAAGARAGGTNGGTXGKGCG------------------------CSSKSSSPRGARAPAAMSS-KATAVGGVVKGKQLPP----DEWPEWLAARRA 646          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDJ6_ECTSI1.910e-5234.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LRF5_9PHAE2.640e-5042.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 590..613
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 614..1049
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..589
NoneNo IPR availableTMHMMTMhelixcoord: 13..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:1061930..1066518 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1390.1mRNA_P-fluviatile_contig12.1390.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 1060746..1066532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1390.1 ID=prot_P-fluviatile_contig12.1390.1|Name=mRNA_P-fluviatile_contig12.1390.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1050bp
MVRRRRQGRPRKNASSSTAASIALGALALFLIPPSAAPSLAGTAVAAVAA
ATGAAAAGTTAAVASPPFDVDVGQLKEKRGISGKGQQGPNGWVEAGEVEE
GLPEGPNNRHGDATRPGGGGSSIGGVSGRIGDERRGCDERSLHSGHPAEN
LGQGRDAAAASAAAAAVAGAAGAGTADATATARSSGGPAAKNSDRAVRDS
FVDIPVREGREGGDRGGACSASDGGCKNGNSGSGSGSGSSNDRWAAQTIG
VPPPPPGDVSASAPSGGGGGGCGSKTIGDQVPDVREDSMRCVGNNACVPR
PAGMGSDANSGDDPEECGGVRSVENISEGAGASCAAGEIPSSAAFGGGVD
YSVGDACSVGPALTASGVDGRSVTTALYGGKKRSIVTRKERVVHEELLGS
PGNGQGLGGLDERQVIGTAAATAAASSYPSSADVHIADNLEHGLRRGEEG
DVLNEATAAAAATPAVYPYSTPPPQEDHQLLSPAATKPPAQERRGPLVKG
DGADFNTNRRAPAAVAGSEAGVKNAGGYEDGSGTGGGRRLQGGGDATGLG
KGAAGDGGGRRGEEWEGDEENMAESAVAGNGRRWPSWRSFVFALLLCAVL
LGTYTRGTLLGWLPLLVRSSREGWALDLDSAIACARSRASSFCSAGGPAA
VFPGDTADDPDLPELISDDEGDGNGDSDSNADGDRRGSGGAGGDGSVEGD
GGAPLMWDTRPKPDDYLVFHPVLGVVPAGAVRAWGGEGRGGWTAGRTPGN
RERKAAEAVETVATGMTVGAGAAAAAAVAGIGSAVNGGPGTSCWESWCSS
SSLPRRGAGVSGETSTAKAFAVNGKGKQLPPVRYTKEWFEWVAAREAAAE
AAAAAAAAALVVPAGEALSSFVSPEAAEGAAATPGRGASAGGASGAAVPA
GGGRESTRVMGGDGLKLPTKRISAEAAAGVVKPAKPQLLPESCLSHTPAA
LSLQYGGGKGTSNGDCGGSGGGGGGSSEGRLVPPGGGGCCCDGSSGDDSI
GFNGCSSEDSGDAMPRANNFMLRLGSSEHQPAAAAAAAAAMPMAAYRVS*
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