prot_P-fluviatile_contig12.1372.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1372.1
Unique Nameprot_P-fluviatile_contig12.1372.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length561
Homology
BLAST of mRNA_P-fluviatile_contig12.1372.1 vs. uniprot
Match: A0A6H5L1T3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T3_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 9.940e-71
Identity = 216/567 (38.10%), Postives = 278/567 (49.03%), Query Frame = 0
Query:    4 IVSKIVAFLGIFQSVSSDATTVAAPRAEPTGASVAVNVNQGLLVTGAVRFGVVPVPNLCVELRGYDAAAAAAAAVDQVSATSSAPLGPGGIFTAP--AGGGNSWRGWGETEGEGGWEPRFVQLQRTSEPDGSFLFVAPETGLVLVLASYAHGSDHPTAVRVFSDSPTGRGGQQEPMAFGGVDSGRLRVDVDL--AGATHAPEVLWS-AAAGDNDRSPCARFEAESSGSTPSEGREALPSALQSGHGRQISWGGLSRLFGGNGXXXXXXXXXXXXXXXXXXXXXXXGRIRVALLTDWLRAFCRNVFNRLGAVSSEATFTAGRAFLRPGVEKAEGLVHEVIAKAWLPAKVVMTMWSKWAAQKSTELSSRFGHRSRQFSAWSMETAIRLSTWLEHSPVALEACLAVWWIRILGIALVLGALQQVHLVAHKLCRATTVVAGQDGDGGAGDDGRRRRESRHPPAADLSSGIVGTFHTSDGRTSHVDFWRFVHPEQPAADERQWRGISGALWGSN-----RAAPAAEVGCGKREETDDFSSIFSVLNHPSCAQQESKGDGSTGATSSVFVVTQ 560
            I+  IVAF GI     + A       A PTG  ++V VN+GLLVTG+V FGVV V NLCVELRGYDAA AAA                GG+ TA   A    +WR W    G G    RF QLQRT  P+GSF FV PE+GLVLVLA+Y+ G D+P AVRVF D     GG +      GV+SGR++VD+DL   G +HAPE LWS  AA +NDRSPCAR EA+S G++     ++  S      G  ++   LS L                               RVAL T  L   C N+  RLGA   E     G   LR  ++KA   V E           ++   S W AQ  +ELSS F   S +F  W  E + ++S          E     WW+R+ GIAL LG +QQ+ LV    C        ++  G   D G   R +     AD    +VGTF+  DG+ S ++  RF  PEQP   ER+  G+  A++G +     + A   E   GK  E D+F+S+F  L+ P+C+       G+ GA S V VVTQ
Sbjct:   32 ILQSIVAFAGILHCRHAQAF------ASPTG--ISVGVNEGLLVTGSVHFGVVVVQNLCVELRGYDAADAAALRTST-----------GGVATAATVALESGTWRDW---HGAGA---RFSQLQRTGGPEGSFAFVTPESGLVLVLAAYSEGGDYPAAVRVFPDGLGSNGGDR------GVESGRVQVDIDLLEVGRSHAPEALWSQGAARENDRSPCARAEAKSKGNSDPPASDSRGSVEGDDDGDAVAQAALSAL---------------DVPYLAGLAGETLAHARVAL-TALLLFSCSNL-GRLGADLWETGVAVGDV-LRLAMKKAWRYVQE---------SALLVNSSAWFAQGLSELSSWFEQNSNRF--WWEEASTQISR--RSGQQTPEELWTAWWVRVGGIALSLGFVQQI-LVFICRCFGREEEPREEPIGNDDDKGFGARGNEPISEADA---MVGTFYGQDGKVSRLEIARFDRPEQPVTAERRG-GVLSAVFGRSSSIRSKTASVDEASSGKGTEADEFTSMFRALSQPACSTMGPVEGGAEGA-SQVIVVTQ 530          
BLAST of mRNA_P-fluviatile_contig12.1372.1 vs. uniprot
Match: D8LDI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI7_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 5.730e-64
Identity = 199/540 (36.85%), Postives = 264/540 (48.89%), Query Frame = 0
Query:   31 EPTGASVAVNVNQGLLVTGAVRFGVVPVPNLCVELRGYDAAAAAAAAVDQVSATSSAPLGPGGIFTAPAGGGNSWRGWGETEGEGGWEPRFVQLQRTSEPDGSFLFVAPETGLVLVLASYAHGSDHPTAVRVFSDSPTGRGGQQEPMAFGGVDSGRLRVDVDL--AGATHAPEVLWS-AAAGDNDRSPCARFEAESSGSTPSEGREALPSALQSGHGRQISWGGLSRLFGGNGXXXXXXXXXXXXXXXXXXXXXXXGRIRVALLTDWLRAFCRNVFNRLGAVSSEATFTAGRAFLRPGVEKAEGLVHEVIAKAWLPAKVVMTMWSKWAAQKSTELSSRFGHRSRQFSAWSMETAIRLSTWL-EHSPVALEACLAVWWIRILGIALVLGALQQVHLVAHKLCRA-TTVVAGQDGDGGAGDDGRRRRESRHPPAADLSSGIVGTFHTSDGRTSHVDFWRFVHPEQPAADERQWRGISGALWG-----SNRAAPAAEVGCGKREETDDFSSIFSVLNHPSCAQQESKGDGSTGATSSVFVVTQ 560
            + +G  + V    G   + +V FGVV VPNLCVELRGYDAA AAA       A ++A           +G   +WR W       G E RF QLQRT  P+GSF FV PE+GLVLVLA+Y+ G D+P AVRVF D     GG +      GV+SGR++V +DL   G +HAPE LWS A+A +NDRSPCAR EA+S G++     ++  S         ++   LS L                               RVAL T  L + C  +   LGA   E    AG   LR  + KA   V E       PA         W +Q  +ELSS F   S +F  W  E + R+S W  + +P   E     WW+R+ GIAL LG +QQV +    +CR      A ++   G GDD        + P ++  + +VGTF+  DG+ S ++  RF   EQP   ER   G+  A++G      +R A   EV  GK  E D+FSS+F  L+ P+C+       G+ GA S V VVTQ
Sbjct:   42 DKSGRLLTVEKYLGSSTSRSVHFGVVAVPNLCVELRGYDAADAAALRTSTGGAAATAAT-----VAVESG---TWRDW------HGAEARFSQLQRTEGPEGSFAFVTPESGLVLVLAAYSEGGDYPAAVRVFPDGLGSNGGGR------GVESGRVQVHIDLLEGGRSHAPEALWSQASARENDRSPCARAEAKSKGNSDPPASDSSGSIEXXXXXGAVAQAALSAL---------------DVPYVAGLAGETLAHARVAL-TALLLSSCSKL-GWLGADLWETGVAAGDV-LRLAMNKAGRYVQESALLVNSPA---------WFSQGLSELSSWFEQNSTRF--WWEEASTRISRWSGQRTP---EELWVTWWVRVGGIALSLGLVQQVLVF---ICRCFVRAGAPREDPVGDGDDDEGFGARGNEPISEADA-MVGTFYDQDGKVSRLEIARFDRVEQPVTVERMG-GVLSAVFGRSSSNKSRKASVDEVSNGKETEADEFSSMFRALSQPACSTMGPVEGGAEGA-SQVIVVTQ 523          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1T3_9PHAE9.940e-7138.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDI7_ECTSI5.730e-6436.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..398
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 399..416
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 417..560
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.692

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:798862..801295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1372.1mRNA_P-fluviatile_contig12.1372.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 798862..801295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1372.1 ID=prot_P-fluviatile_contig12.1372.1|Name=mRNA_P-fluviatile_contig12.1372.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=561bp
MAIIVSKIVAFLGIFQSVSSDATTVAAPRAEPTGASVAVNVNQGLLVTGA
VRFGVVPVPNLCVELRGYDAAAAAAAAVDQVSATSSAPLGPGGIFTAPAG
GGNSWRGWGETEGEGGWEPRFVQLQRTSEPDGSFLFVAPETGLVLVLASY
AHGSDHPTAVRVFSDSPTGRGGQQEPMAFGGVDSGRLRVDVDLAGATHAP
EVLWSAAAGDNDRSPCARFEAESSGSTPSEGREALPSALQSGHGRQISWG
GLSRLFGGNGGGGSGNGNGGGSGSGSGNDSGNGGRIRVALLTDWLRAFCR
NVFNRLGAVSSEATFTAGRAFLRPGVEKAEGLVHEVIAKAWLPAKVVMTM
WSKWAAQKSTELSSRFGHRSRQFSAWSMETAIRLSTWLEHSPVALEACLA
VWWIRILGIALVLGALQQVHLVAHKLCRATTVVAGQDGDGGAGDDGRRRR
ESRHPPAADLSSGIVGTFHTSDGRTSHVDFWRFVHPEQPAADERQWRGIS
GALWGSNRAAPAAEVGCGKREETDDFSSIFSVLNHPSCAQQESKGDGSTG
ATSSVFVVTQ*
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