prot_P-fluviatile_contig11.1276.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1276.1
Unique Nameprot_P-fluviatile_contig11.1276.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length129
Homology
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BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Match: D8LU48_ECTSI (Ubiquitin UbiA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU48_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 4.710e-74
Identity = 115/128 (89.84%), Postives = 120/128 (93.75%), Query Frame = 0 
Query:    1 MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQLEAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
            MQIFGKTL+GRTITLDVAPSDTIDGVKQ IQD EGIPASQQRLV A KQLE GRTL+DYNV+Q ST+ V+LSL GGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK
Sbjct:    1 MQIFGKTLTGRTITLDVAPSDTIDGVKQTIQDLEGIPASQQRLVFAAKQLEDGRTLSDYNVEQESTLQVLLSLRGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
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BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Match: A0A8D0YMU0_PIG (Ubiquitin-60S ribosomal protein L40 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0YMU0_PIG)

HSP 1 Score: 218 bits (556), Expect = 1.840e-71
Identity = 113/128 (88.28%), Postives = 116/128 (90.62%), Query Frame = 0 
Query:    1 MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQLEAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
            MQIFGKTL+GRTITLDV  SDTI GVKQ IQDREGIPA QQRLV   KQLE GRTL DYNVQ+ STVHV+LSL GGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK
Sbjct:    1 MQIFGKTLTGRTITLDVESSDTIVGVKQIIQDREGIPACQQRLVLGAKQLEEGRTLGDYNVQKESTVHVLLSLHGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
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BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Match: A0A7S3H022_9STRA (Hypothetical protein n=5 Tax=Eukaryota TaxID=2759 RepID=A0A7S3H022_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.690e-64
Identity = 100/128 (78.12%), Postives = 114/128 (89.06%), Query Frame = 0 
Query:    1 MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQLEAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
            MQIF KTL+G+TITL+V PSD+ID VKQ IQD+EGIP  QQRL+ A KQLE GRTL+DYN+Q+ ST+H++L L GGV+DPSLAALAKTFN EKM+CRKCYARLPPRAKNCRKKKCGHTNQLR KKKLK
Sbjct:   19 MQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVFDPSLAALAKTFNCEKMICRKCYARLPPRAKNCRKKKCGHTNQLRIKKKLK 146
[Close]
BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Match: W7TN89_9STRA (Ubiquitin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN89_9STRA)

HSP 1 Score: 202 bits (515), Expect = 2.630e-64
Identity = 101/128 (78.91%), Postives = 113/128 (88.28%), Query Frame = 0 
Query:    1 MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQLEAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
            MQIF KTL+G+TITLDV PSDTI+ VKQ IQD+EGIP  QQRL+ A KQLE GRTL+DYN+Q+ ST+H++L L GGVYDPSLAALAKTFN EKM+CRKCYARLPPRAKNCRKKKCGHTN LR KKKLK
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMICRKCYARLPPRAKNCRKKKCGHTNHLRIKKKLK 128
[Close]
BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Match: B7G5H7_PHATC (Ubiquitin extension protein 1/2 n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7G5H7_PHATC)

HSP 1 Score: 196 bits (497), Expect = 1.810e-62
Identity = 98/128 (76.56%), Postives = 110/128 (85.94%), Query Frame = 0 
Query:    1 MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQLEAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
            MQIF KTL+G+TITLDV PSDTID VK  IQD+EGIP  QQRL+ A KQLE GRTL+DYN+Q+ ST+H++L L GGVYDPSLA LAK FN +K VCRKCYARLPPRA NCRKKKCGHT+QLRPKKKLK
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYDPSLALLAKGFNCDKAVCRKCYARLPPRATNCRKKKCGHTSQLRPKKKLK 128
[Close]
BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Match: A0A1Z5JFA3_FISSO (Large subunit ribosomal protein L40e n=4 Tax=Stramenopiles TaxID=33634 RepID=A0A1Z5JFA3_FISSO)

HSP 1 Score: 195 bits (495), Expect = 3.660e-62
Identity = 97/128 (75.78%), Postives = 110/128 (85.94%), Query Frame = 0 
Query:    1 MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQLEAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
            MQIF KTL+G+TITLDV PSDTID VK  IQD+EGIP  QQRL+ A KQLE GRTL+DYN+Q+ ST+H++L L GGVYDP+LA LAK FN +K VCRKCYARLPPRA NCRKKKCGHT+QLRPKKKLK
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYDPTLAMLAKKFNCDKAVCRKCYARLPPRATNCRKKKCGHTSQLRPKKKLK 128
[Close]
BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Match: A0A448YZG3_9STRA (Ubiquitin-like domain-containing protein n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A448YZG3_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.000e-61
Identity = 95/128 (74.22%), Postives = 109/128 (85.16%), Query Frame = 0 
Query:    1 MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQLEAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
            MQIF KTL+G+TITLDV PSDTID VK  IQD+EGIP  QQRL+ A KQLE GRTL+DYN+Q+ ST+H++L L GGVYDPSLA LA+ +N EK +CRKCYARLPP+A NCRKKKCGHT QLRPKKKLK
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYDPSLAMLARKYNCEKAICRKCYARLPPKASNCRKKKCGHTAQLRPKKKLK 128
[Close]
BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Match: A0A0G4EN71_VITBC (Ubiquitin-like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EN71_VITBC)

HSP 1 Score: 192 bits (489), Expect = 1.370e-60
Identity = 95/128 (74.22%), Postives = 110/128 (85.94%), Query Frame = 0 
Query:    1 MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQLEAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
            MQIF KTL+G+TITLDV PSDTI+ VK  IQD+EGIP  QQRL+ A KQLE GRTL+DYN+Q+ ST+H++L L GGV +PSLA LA+ +N EKM+CRKCYARLPPRA NCRKKKCGHTNQLRPKKKLK
Sbjct:   48 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLAVLARKYNCEKMICRKCYARLPPRAVNCRKKKCGHTNQLRPKKKLK 175
[Close]
BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Match: K0RS17_THAOC (Ubiquitin-like domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RS17_THAOC)

HSP 1 Score: 192 bits (488), Expect = 2.600e-60
Identity = 95/128 (74.22%), Postives = 109/128 (85.16%), Query Frame = 0 
Query:    1 MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQLEAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
            M IF KTL+G+TITLDV PSDTID VK  IQD+EGIP  QQRL+ A KQLE GRTL+DYN+Q+ ST+H++L L GGVYDPSLA LAK FN EK +CRKCYARLPP+A NCRKKKCGH++QLRPKKKLK
Sbjct:   57 MAIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYDPSLALLAKKFNCEKQICRKCYARLPPKATNCRKKKCGHSSQLRPKKKLK 184
[Close]
BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Match: RL40_NEUCR (Ubiquitin-60S ribosomal protein L40 n=7 Tax=Eukaryota TaxID=2759 RepID=RL40_NEUCR)

HSP 1 Score: 189 bits (481), Expect = 4.970e-60
Identity = 93/128 (72.66%), Postives = 109/128 (85.16%), Query Frame = 0 
Query:    1 MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQLEAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCYARLPPRAKNCRKKKCGHTNQLRPKKKLK 128
            MQIF KTL+G+TITL+V  SDTID VKQ IQD+EGIP  QQRL+ A KQLE GRTL+DYN+Q+ ST+H++L L GG+ +PSL ALA  FN +KM+CRKCYARLPPRA NCRK+KCGHTNQLRPKKKLK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASKFNCDKMICRKCYARLPPRATNCRKRKCGHTNQLRPKKKLK 128
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU48_ECTSI4.710e-7489.84Ubiquitin UbiA n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A8D0YMU0_PIG1.840e-7188.28Ubiquitin-60S ribosomal protein L40 n=1 Tax=Sus sc... [more]
A0A7S3H022_9STRA1.690e-6478.13Hypothetical protein n=5 Tax=Eukaryota TaxID=2759 ... [more]
W7TN89_9STRA2.630e-6478.91Ubiquitin n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
B7G5H7_PHATC1.810e-6276.56Ubiquitin extension protein 1/2 n=9 Tax=Bacillario... [more]
A0A1Z5JFA3_FISSO3.660e-6275.78Large subunit ribosomal protein L40e n=4 Tax=Stram... [more]
A0A448YZG3_9STRA3.000e-6174.22Ubiquitin-like domain-containing protein n=6 Tax=B... [more]
A0A0G4EN71_VITBC1.370e-6074.22Ubiquitin-like domain-containing protein n=1 Tax=V... [more]
K0RS17_THAOC2.600e-6074.22Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
RL40_NEUCR4.970e-6072.66Ubiquitin-60S ribosomal protein L40 n=7 Tax=Eukary... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956UbiquitinPRINTSPR00348UBIQUITINcoord: 11..31
score: 61.1
coord: 32..52
score: 64.12
coord: 53..74
score: 56.93
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 1..72
e-value: 1.2E-25
score: 101.2
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 6..73
e-value: 7.9E-25
score: 86.4
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..76
score: 23.244
IPR001975Ribosomal protein L40eSMARTSM01377Ribosomal_L40e_3coord: 77..128
e-value: 1.5E-29
score: 114.2
IPR001975Ribosomal protein L40ePFAMPF01020Ribosomal_L40ecoord: 79..127
e-value: 4.0E-28
score: 97.1
IPR038587Ribosomal protein L40e superfamilyGENE3D2.20.28.70coord: 79..128
e-value: 8.8E-28
score: 97.7
NoneNo IPR availableGENE3D3.10.20.90coord: 1..78
e-value: 3.1E-31
score: 109.0
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..127
NoneNo IPR availablePANTHERPTHR10666:SF298coord: 1..127
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 76..128
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:3205856..3209878 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1276.1mRNA_P-fluviatile_contig11.1276.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 3204390..3209878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1276.1 ID=prot_P-fluviatile_contig11.1276.1|Name=mRNA_P-fluviatile_contig11.1276.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=129bp
MQIFGKTLSGRTITLDVAPSDTIDGVKQAIQDREGIPASQQRLVHADKQL
EAGRTLADYNVQQASTVHVMLSLCGGVYDPSLAALAKTFNTEKMVCRKCY
ARLPPRAKNCRKKKCGHTNQLRPKKKLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019956Ubiquitin
IPR000626Ubiquitin_dom
IPR001975Ribosomal_L40e
IPR038587L40e_sf
IPR011332Ribosomal_zn-bd
IPR029071Ubiquitin-like_domsf