prot_P-fluviatile_contig11.1205.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1205.1
Unique Nameprot_P-fluviatile_contig11.1205.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length147
Homology
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BLAST of mRNA_P-fluviatile_contig11.1205.1 vs. uniprot
Match: A0A6H5L1D6_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D6_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 9.720e-8
Identity = 45/99 (45.45%), Postives = 52/99 (52.53%), Query Frame = 0 
Query:   69 RRCHVM---RKHSRVSGAWMVATEGPPPAAAVSP--------------LSLPKAAAAAEPPAGSG----SPRAHKLKVATFFFFWYTFNVGYNLCTKFT 146
            RRCHV    R   R + A MVATEG     ++SP                   + A  EP A +     S RAH+L+V TFFF WYTFNVGYNLCTKFT
Sbjct:   80 RRCHVSTARRSSVRKARARMVATEGS--RVSMSPEKPXXXXXXXXXXXXXXXVSKAGDEPDAAAAGTAESARAHRLRVTTFFFLWYTFNVGYNLCTKFT 176
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1D6_9PHAE9.720e-845.45TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 30..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 44..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2496424..2498419 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1205.1mRNA_P-fluviatile_contig11.1205.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 2496424..2498419 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1205.1 ID=prot_P-fluviatile_contig11.1205.1|Name=mRNA_P-fluviatile_contig11.1205.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=147bp
MKPSPLKDVAMGKERGVRARRRTAGSSRRCAVLLSMYALLSCLDNVCALR
GCPHVGRHIAKRGNPSCARRCHVMRKHSRVSGAWMVATEGPPPAAAVSPL
SLPKAAAAAEPPAGSGSPRAHKLKVATFFFFWYTFNVGYNLCTKFT*
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