prot_P-fluviatile_contig11.1079.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1079.1
Unique Nameprot_P-fluviatile_contig11.1079.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length588
Homology
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BLAST of mRNA_P-fluviatile_contig11.1079.1 vs. uniprot
Match: A0A6H5KUN9_9PHAE (SAGA-associated factor 11 (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUN9_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 4.030e-90
Identity = 197/313 (62.94%), Postives = 218/313 (69.65%), Query Frame = 0 
Query:   48 GGVARQELMPAPSLKRPRHVEDWLLHPPDGSGPIDLRQEAEAIYSAFELSLCRDVVFE--LHRELHTGLLTTERLWAERLAPPPKSVPGGDVYGRIPPREPSSNITCPSCNRSVGAARYAPHLDKCALGSSRGRASRSARSSVPAPDAFRSSGSSNSPSAKQYSSPFSATAKLSAKLLPSPKAXXXXXXXXXXXQKVTSPRPPS---------SKLPSSLASSSRVPLKPRPAPXXXXX-------------VVHAALTDTGRDPLHILIKLVGGVPVQTYHRVVLSTPRAEKPHSQQPRSPSTRSVGSDDRP 336
            G +   +++P PSLKRPR VEDWL+HPPDGS PIDLRQEAEAIYSAFELSLCRDVVFE  LHRELHTG+LT ERLWAE   PPPKSV GGDVYGRIPPREPS++ITCPSCNR+VGAARYAPHLDKCALGSSRGRASRSARSS P  +  + + SS SPS+                       XXXXXXXXXXX     P+PP              +  +++SR   KP    XXXXX              VH AL DTGR+PLHIL+KLV G PVQTYHRVVLSTPR EKP  QQPRSPSTRS+GSD RP
Sbjct:   67 GAMTEGQMLP-PSLKRPREVEDWLVHPPDGSDPIDLRQEAEAIYSAFELSLCRDVVFEASLHRELHTGVLTKERLWAESNNPPPKSVAGGDVYGRIPPREPSTSITCPSCNRAVGAARYAPHLDKCALGSSRGRASRSARSSQPQQEPSKYADSS-SPSSXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXPKPPKLAXXXXXXXXXXXARPSANSRPTSKPXXXXXXXXXXXXXXXXXXXXXXAVHPALVDTGREPLHILVKLVDGAPVQTYHRVVLSTPRVEKPQPQQPRSPSTRSLGSDHRP 370
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BLAST of mRNA_P-fluviatile_contig11.1079.1 vs. uniprot
Match: D7FXW5_ECTSI (SAGA-associated factor 11 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW5_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 9.350e-57
Identity = 97/109 (88.99%), Postives = 102/109 (93.58%), Query Frame = 0 
Query:   80 PIDLRQEAEAIYSAFELSLCRDVVFELHRELHTGLLTTERLWAERLAPPPKSVPGGDVYGRIPPREPSSNITCPSCNRSVGAARYAPHLDKCALGSSRGRASRSARSSV 188
            PIDLRQEA+ IYSAFELSLCRDVVFELHRELHTG+LT ERLWAE   PPPKSV GGDVYGRIPPREPS++ITCPSCNR+VGAARYAPHLDKCALGSSRGRASRSARSS 
Sbjct:   19 PIDLRQEADTIYSAFELSLCRDVVFELHRELHTGVLTKERLWAEHNNPPPKSVAGGDVYGRIPPREPSTSITCPSCNRAVGAARYAPHLDKCALGSSRGRASRSARSSA 127
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUN9_9PHAE4.030e-9062.94SAGA-associated factor 11 (Fragment) n=1 Tax=Ectoc... [more]
D7FXW5_ECTSI9.350e-5788.99SAGA-associated factor 11 n=1 Tax=Ectocarpus silic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013246SAGA complex, Sgf11 subunitPFAMPF08209Sgf11coord: 150..171
e-value: 9.7E-10
score: 37.8
NoneNo IPR availablePANTHERPTHR46367FAMILY NOT NAMEDcoord: 88..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:1094691..1099136 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1079.1mRNA_P-fluviatile_contig11.1079.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 1094585..1100235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1079.1 ID=prot_P-fluviatile_contig11.1079.1|Name=mRNA_P-fluviatile_contig11.1079.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=588bp
METKTDRYGGNSVVVATSATRPASKPGLCSDNSSGLTSAGLGSRQTEGGV
ARQELMPAPSLKRPRHVEDWLLHPPDGSGPIDLRQEAEAIYSAFELSLCR
DVVFELHRELHTGLLTTERLWAERLAPPPKSVPGGDVYGRIPPREPSSNI
TCPSCNRSVGAARYAPHLDKCALGSSRGRASRSARSSVPAPDAFRSSGSS
NSPSAKQYSSPFSATAKLSAKLLPSPKAKPPKPAPSPKPQKVTSPRPPSS
KLPSSLASSSRVPLKPRPAPPPPPPVVHAALTDTGRDPLHILIKLVGGVP
VQTYHRVVLSTPRAEKPHSQQPRSPSTRSVGSDDRPSASPRNSSRAAVGG
DGSSGGNSTICRGSGGGSGGGTAGASAIPAKPSLSPTVPVPAASEATAVR
TNRQRQQGGALSRSTSLSSDGLFSDKRLVDSRGGNYFPLSSSSTATTAGV
RAGGGDTGGGGGGRGGGTKPPKRPRTSEGDTGYEGSREVAGHADFEQDDT
LTSPPSSPPPPAPRVPPPMFISAPPSPPPSSNQCAPNNSSSSSSSANRQN
CGSSGRVEGAAGGKDLDRRYLGMAVDGADRQALSCSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013246SAGA_su_Sgf11