prot_P-fluviatile_contig10.651.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig10.651.1
Unique Nameprot_P-fluviatile_contig10.651.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length147
Homology
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Match: A0A6H5JIS9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS9_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 4.470e-62
Identity = 93/146 (63.70%), Postives = 118/146 (80.82%), Query Frame = 0
Query:    1 MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSGREWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGANKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKVIQRS 146
            M+L H+DVKQAYT A L  ++++R+P+G G  SH +V+AERAI+GLKQSGR+W YHAADTL+ENGFEQ KADPCVFRK+VD VV M+IVI VDDI+VAG+++ C+ELL  LN+KFPTK+ GE   FDG  IDRD+  GT K+ Q +
Sbjct:   62 MNLNHWDVKQAYTHATLDEEVFLRIPAGYGDKSHKIVQAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMVIVIYVDDILVAGSDEDCEELLASLNKKFPTKNRGEYEWFDGCAIDRDVEPGTFKISQTA 207          
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Match: A0A6H5KSR8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR8_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 6.380e-62
Identity = 96/146 (65.75%), Postives = 119/146 (81.51%), Query Frame = 0
Query:    1 MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSGREWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGANKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKVIQRS 146
            M+L H+DVKQA T A L  ++ +RLP+GCG  SH +VKAERA++GLKQSGR+W YHAADTL+ENGFEQ KADPCVFRK+VD VV MIIVI VDDI+VAG+++ C+ELL  LN+KFPTK+LGEC  FDG  I+RD+  GTL + Q +
Sbjct:   10 MNLNHWDVKQANTHATLNEEVLLRLPAGCGDKSHKIVKAERALYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLSISQTA 155          
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Match: A0A6H5JUB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB8_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 6.870e-62
Identity = 96/146 (65.75%), Postives = 121/146 (82.88%), Query Frame = 0
Query:    1 MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSGREWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGANKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKVIQRS 146
            M+L H+DVKQAYT A L  +++++LP+GCG  SH + KAERAI+GLKQSGR+W YHAADTL+ENGFEQ KADPCVFRK+VD VV MIIVI VDDI+VAG+++ C+ELL  LN+KFPTK+LGEC  FDG  I+RD+  GTL++ Q +
Sbjct:  352 MNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHMITKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTA 497          
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Match: A0A6H5JG17_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG17_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.460e-61
Identity = 94/146 (64.38%), Postives = 119/146 (81.51%), Query Frame = 0
Query:    1 MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSGREWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGANKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKVIQRS 146
            M+L H+DVKQAYT A L+ ++++R+P+GCG  SH +VKAE AI+GLKQSGR+W YHAADTL+ENG EQ KADPCVFRK+ D VV MIIVI VDDI+VAG+++ C+ELL  LN+KFPTK+LGEC  FDG  I+R +  GTLK+ Q +
Sbjct:   74 MNLNHWDVKQAYTHAALEEEVFLRIPAGCGDKSHKIVKAEGAIYGLKQSGRQWGYHAADTLVENGLEQYKADPCVFRKMADEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGYAIER-VDAGTLKISQTA 218          
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Match: A0A6H5K2J9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J9_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.060e-61
Identity = 92/146 (63.01%), Postives = 117/146 (80.14%), Query Frame = 0
Query:    1 MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSGREWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGANKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKVIQRS 146
            M+L H+DVKQAYT A L  +++++LP+GCG  SH + KAER+I+GLKQSGR+W YHAADTL+ENGFEQ KADPCVFRK+VD VV MIIVI VDDI+VAG+++ C+ELL  LN+KFPTK LGEC  F+G  ++  I  GTL + Q +
Sbjct:   10 MNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERSIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKILGECQWFNGCAMEIYIEAGTLAISQTA 155          
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Match: A0A6H5K5G1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G1_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.410e-60
Identity = 93/142 (65.49%), Postives = 118/142 (83.10%), Query Frame = 0
Query:    1 MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSGREWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGANKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKV 142
            M+L  +DVKQAYT A L  +++++LP+GCG  SH + KAERAI+GLKQSGR+W YHAADTL+ENGFEQ KADPCVFRK+VD VV MIIVI VDDI+VAG+++ C+ELL  LN+KFPTK+LGEC  FDG  I+RD+  GT+++
Sbjct:  248 MNLNPWDVKQAYTHATLGKEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTVRI 389          
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 2.630e-60
Identity = 96/146 (65.75%), Postives = 121/146 (82.88%), Query Frame = 0
Query:    1 MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSGREWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGANKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKVIQRS 146
            M+L H+DVKQAYT A L  +++++LP+GCG  SH + KAERAI+GLKQSGR+W YHAADTL+ENGFEQ KADPCVFRK+VD VV MIIVI VDDI+VAG+++ C+ELL  LN+KFPTK+LGEC  FDG  I+RD+  GTL++ Q +
Sbjct:  434 MNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTA 579          
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 6.660e-60
Identity = 96/146 (65.75%), Postives = 121/146 (82.88%), Query Frame = 0
Query:    1 MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSGREWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGANKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKVIQRS 146
            M+L H+DVKQAYT A L  +++++LP+GCG  SH + KAERAI+GLKQSGR+W YHAADTL+ENGFEQ KADPCVFRK+VD VV MIIVI VDDI+VAG+++ C+ELL  LN+KFPTK+LGEC  FDG  I+RD+  GTL++ Q +
Sbjct:  643 MNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDVEAGTLRISQTA 788          
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Match: A0A6H5JZE6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE6_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 8.280e-60
Identity = 91/142 (64.08%), Postives = 114/142 (80.28%), Query Frame = 0
Query:    1 MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSGREWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGANKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKV 142
            M+L H+DVKQAYT A L  +++++LP+GCG  SH + KAERAI+GLKQSGR+W YHAADTL+ENGFEQ KADPCVFRK+ D VV MIIVI VDDI+V G ++ C+ELL  LN++FPTK+LGEC  FDG  I+RD+  G L +
Sbjct:  221 MNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMTDEVVVMIIVIYVDDILVDGFDEDCEELLASLNKRFPTKNLGECEWFDGCAIERDVEAGALXI 362          
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 9.120e-60
Identity = 96/146 (65.75%), Postives = 121/146 (82.88%), Query Frame = 0
Query:    1 MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSGREWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGANKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKVIQRS 146
            M+L H+DVKQAYT A L  +++++LP+GCG  SH + KAERAI+GLKQSGR+W YHAADTL+ENGFEQ KADPCVFRK+VD VV MIIVI VDDI+VAG+++ C+ELL  LN+KFPTK+LGEC  FDG  I+RD+  GTL++ Q +
Sbjct:  843 MNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTA 988          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIS9_9PHAE4.470e-6263.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSR8_9PHAE6.380e-6265.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JUB8_9PHAE6.870e-6265.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JG17_9PHAE1.460e-6164.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2J9_9PHAE2.060e-6163.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5G1_9PHAE1.410e-6065.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE2.630e-6065.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTV6_9PHAE6.660e-6065.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZE6_9PHAE8.280e-6064.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE9.120e-6065.75Reverse transcriptase Ty1/copia-type domain-contai... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 4..140
e-value: 2.5E-20
score: 73.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig10contigP-fluviatile_contig10:662389..662829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig10.651.1mRNA_P-fluviatile_contig10.651.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig10 661541..662950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig10.651.1 ID=prot_P-fluviatile_contig10.651.1|Name=mRNA_P-fluviatile_contig10.651.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=147bp
MDLRHFDVKQAYTRAKLQHDMWMRLPSGCGKLSHTVVKAERAIHGLKQSG
REWEYHAADTLIENGFEQSKADPCVFRKVVDGVVQMIIVINVDDIMVAGA
NKHCDELLDCLNRKFPTKDLGECSLFDGIVIDRDIATGTLKVIQRS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2