prot_P-fluviatile_contig1.83.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.83.1
Unique Nameprot_P-fluviatile_contig1.83.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length229
Homology
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BLAST of mRNA_P-fluviatile_contig1.83.1 vs. uniprot
Match: D7FJK4_ECTSI (TPR repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK4_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.190e-20
Identity = 137/224 (61.16%), Postives = 144/224 (64.29%), Query Frame = 0 
Query:    1 MDDHRFTKAITYYREKLKQNPTNPALHHHLAPLMLQGGNVRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKHGRRAVELKPRNPLGHRVLGQILDQMGNSSMSLHHRKIAVLRGPGSAGESGRRVYDPHDTHTYKKIGTQLVTQGGAERGNSHLFVDYYRAVKGKSVVLANSERTYEILDKC 224
            M D RFT AI YYREKLKQNP+NPA HH++APL+ +GGNVR+A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                           HDTHTYKKIG QLVT G AER NSH FVD YRA+ GK V LA SERT E L KC
Sbjct:    1 MSDPRFTGAIAYYREKLKQNPSNPAHHHNIAPLLFEGGNVRAAMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHDTHTYKKIGAQLVTLGQAERENSHAFVDCYRAMAGKQVELATSERTNECLCKC 218
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.83.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJK4_ECTSI1.190e-2061.16TPR repeat n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 92..125
e-value: 0.01
score: 25.1
coord: 24..57
e-value: 16.0
score: 13.1
coord: 58..91
e-value: 23.0
score: 11.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1..23
score: 5.192
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 24..57
score: 10.355
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 92..125
score: 9.47
NoneNo IPR availablePFAMPF13432TPR_16coord: 35..83
e-value: 1.7E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR45586:SF4coord: 7..78
coord: 34..140
NoneNo IPR availablePANTHERPTHR45586FAMILY NOT NAMEDcoord: 7..78
coord: 34..140
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..155
e-value: 1.4E-30
score: 108.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..157
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..159
score: 28.697

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:1208894..1211059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.83.1mRNA_P-fluviatile_contig1.83.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 1208894..1211086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.83.1 ID=prot_P-fluviatile_contig1.83.1|Name=mRNA_P-fluviatile_contig1.83.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=229bp
MDDHRFTKAITYYREKLKQNPTNPALHHHLAPLMLQGGNVRSAIHHFRRA
VQLNPNDVNSKNDLAAILWRLGRWEAALAALCQVVMANSEHYEANVNLAA
VYSSKGECDLALKHGRRAVELKPRNPLGHRVLGQILDQMGNSSMSLHHRK
IAVLRGPGSAGESGRRVYDPHDTHTYKKIGTQLVTQGGAERGNSHLFVDY
YRAVKGKSVVLANSERTYEILDKCLGQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom