prot_P-fluviatile_contig1.362.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.362.1
Unique Nameprot_P-fluviatile_contig1.362.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length294
Homology
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BLAST of mRNA_P-fluviatile_contig1.362.1 vs. uniprot
Match: D8LNA8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNA8_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 3.970e-71
Identity = 147/294 (50.00%), Postives = 173/294 (58.84%), Query Frame = 0 
Query:    1 MQSVVLIGDSCGVSDRSRTPGPAKGDRHLIPLGLIHKPPS-EGGSGGAGIDGADAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPVLVLFPATLDLAIFVSAPPLGETLVSALLTLLAIVGSRAWGWGMVSTTGLSSGVXXXXXVGLGVRSRPVGGWGFPALSMVGIALLGGGLASTALAFSLALSTLWRSGWWLYLQPECAPVLFMLSGVTADVAMGFLLASLLQIHRTPPRQQEQSAASTSMALPLPDESTATVSAHATPRVLQGEMWNAVTPPGLSGLRGRR 293
            MQS+VL+ D    +  + T GPAKGDR L+PLGLI KPP+ E G+G        A                                    GPPV+VLFPATL L+IF++ PP   TL S +LTLLAI+GS      +VS  G+ SG+      GLGVRSRPVGGWGF  LS++GIALLGGG AS     SL LSTLWR GWWLY+QPECAPVLF+LSG TADVA+GFLL SLLQIHR+P                    + A    HA+    Q +MWNAVTPPGL+GLRGRR
Sbjct:    1 MQSLVLVDDYSRPA--AATAGPAKGDRSLLPLGLISKPPAAEHGTGXXXXXXXXA----AGRPQRPTGEPLSDPLYVRAEGCPSTLPPPPAGPPVMVLFPATLPLSIFLAPPP-PATLASGVLTLLAILGSWGXXXXLVSAAGVGSGLAAGLTAGLGVRSRPVGGWGFTGLSVLGIALLGGGKASLTFGMSLGLSTLWRHGWWLYVQPECAPVLFLLSGTTADVALGFLLTSLLQIHRSPSXXXXXXXXXXXXXXXXVSAAAAH-DHHASGS--QADMWNAVTPPGLAGLRGRR 284
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BLAST of mRNA_P-fluviatile_contig1.362.1 vs. uniprot
Match: A0A6H5LJL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJL3_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.790e-19
Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 0 
Query:  171 SMVGIALLGGGLASTALAFSLALSTLWRSGWWLYLQPECAPVLFMLSGVTADVAMGFLLASLLQ 234
            S++GIALLGGG AS     SL L+TLWR GWWLY+QPECAPV F+LSG TADVA+GFLL SLLQ
Sbjct: 1216 SVLGIALLGGGKASLTFGMSLGLTTLWRHGWWLYVQPECAPVFFLLSGTTADVALGFLLTSLLQ 1279
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNA8_ECTSI3.970e-7150.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5LJL3_9PHAE3.790e-1973.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 293..293
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 212..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 234..293
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 158..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..211
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 211..233
NoneNo IPR availableTMHMMTMhelixcoord: 169..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4286165..4288508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.362.1mRNA_P-fluviatile_contig1.362.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 4285541..4289136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.362.1 ID=prot_P-fluviatile_contig1.362.1|Name=mRNA_P-fluviatile_contig1.362.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=294bp
MQSVVLIGDSCGVSDRSRTPGPAKGDRHLIPLGLIHKPPSEGGSGGAGID
GADAHRRQQQPPARPAAAAAAVAAHGSSPSTPPSLPPPPAGPPVLVLFPA
TLDLAIFVSAPPLGETLVSALLTLLAIVGSRAWGWGMVSTTGLSSGVSAG
IAVGLGVRSRPVGGWGFPALSMVGIALLGGGLASTALAFSLALSTLWRSG
WWLYLQPECAPVLFMLSGVTADVAMGFLLASLLQIHRTPPRQQEQSAAST
SMALPLPDESTATVSAHATPRVLQGEMWNAVTPPGLSGLRGRR*
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