prot_P-fluviatile_contig1.254.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.254.1
Unique Nameprot_P-fluviatile_contig1.254.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length874
Homology
BLAST of mRNA_P-fluviatile_contig1.254.1 vs. uniprot
Match: D7FK56_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK56_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 8.760e-121
Identity = 401/878 (45.67%), Postives = 465/878 (52.96%), Query Frame = 0
Query:   11 ASPASLRSVGGEGTRNRATDVSRVDVHETNAARSLNALNENIRSVQEINFAAYGVARPSTLISLSLHSNRVSSLEGLSSLTALVALNLSSNELESAAIRSSAPHLGALSSLESLDLSCNRIDTLLGMPFLPRLSRLIVQYNRLSSLDGVQQSLASSLTHLDAKNNRIAGPTSAHTPHLAALGRLKSLVLASPGRAGGGHPNAVCACQGYRRDVFAAARSLQMLDGEAAAAVADDDDADDNGPEIA------------------------DADGGRGAGGGXXAATNDGRDEARAXXXXXXKRAVRAGVVAAPEEVPTMPRFEALAGRFRSRRRSXXXXXXXXXXXXXXXXXXQGYWDDGDRSPGDVSSSSADCDESFSSDAGWTYDDGGGDGRXXXXXXXGTLADYDPDRPERGVAAAXXXXXAASRLHPDETDAGVAAVGRKIGQKRAKLASEGSSDESKGLGGVDLPEDDAEEECGLLSRLRSVAQEARLEVMDSRLQDLH---AHDAA--AAXXXXXXXTSRRGTAGSSRSREYESIAHVAGRGGGRSNSWAHXXXXXXXXXXXXXXXXRQVTHLGRYGSRLVLRSGPGSGSTAVGRRSSISGRIAVEADRRRPSRWVDSASQGLALAGGWSRGVGGAAGLGPGG----GGPTTPAVATAVAKGCRP--VHFEEASXXXXXXXXXXASCPCCGVQDDDAPELTLSAVGSGS-------GGAFSRPPESSASKHLSDASTQADRGPSGAATLRLSGVARTDRAAAXXXXXXXXXXXXXGPADXXXXXXXXXXXXXXXXXXXXXXXATRRTL---DDRRLAVCFLRWAREADRAKAAXXXXXXXXXXXXXRQDAARERQAWQSLRATLEESAAARER 843
            ASP   R  GG      A +VSRVDVHE +AAR LNA+NENI S+ E++F AYG+ARPSTL+SLSLHSNR+SSLEG +S+TAL ALNLSSNEL+  AIRS APHLG L+SLESLDLSCNRID LLG+PFLP L RL+V YNRL+SLDGVQ +LASSLTHLDA++NRIAGP  AH PHLAALGRL+SL LAS GR     PN +CAC+GYR DVFAAARSL+ LDGE A+   +D +      E A                        D            AA+  G D   A        AV A V  APEEVP  PRF+ALAGRFR R   XXXXXXXXXXXXXXXXXX        R    V+  SA   ES SSDAGW+  DG G               +D D    GV  +      A R+  +ET A  A  GR+      +   +G S   + LG      +D  EE GLLSRLRSVAQEARLEVMDSRLQDLH   A D A  AA         RR  + ++R + +E+ A    R G RSN WA                 R V   G   S + LRS   +G+TAV             ADR  P RW               R  G  A +G GG    GG T P  A A     RP  V   EAS          A C CCG QD  A ELTL A   G        GG  ++P ESS  +HL+DASTQA+RGP   +    SG ART R +              G                          AT   L   D  RLA  F RWAR+ DRA+A XXXXXX       R++A RER+AW+S++A LE SAAARER
Sbjct:   11 ASPTKERGSGGA-----AAEVSRVDVHEMSAARVLNAMNENIGSLGEVDFLAYGIARPSTLVSLSLHSNRLSSLEGFASMTALTALNLSSNELDGEAIRSCAPHLGPLASLESLDLSCNRIDGLLGLPFLPGLRRLLVPYNRLTSLDGVQ-ALASSLTHLDARDNRIAGPAGAHAPHLAALGRLESLALASVGRGRRVQPNPICACRGYREDVFAAARSLKTLDGENASFFFEDRETAATPAEAAAXXXXXXXXXXXXXXXXXXXDVTEDT----------PAASEPGGDRNAAAETAIPVAAVTALV--APEEVPIAPRFDALAGRFRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRR---VAVQSAGV-ESSSSDAGWSEGDGDG-------LRESHAEGFDAD--SFGVVGS------AGRVDTEET-AARAVPGRRKDGGGGRGIFDGESGVREALG------EDVAEEHGLLSRLRSVAQEARLEVMDSRLQDLHDKQAQDTARHAATAARATAALRRSVSNTTRGQAHEAGAAGPTRRGSRSNPWAQHGDPQQRGVAGKGVVPRTVRGTG---STVPLRS---NGNTAV-------------ADR--PVRWT--------------RASGDCAAIGNGGFGSRGGVTQPPAAVA-----RPEDVCGGEASVT--------ARCSCCGGQD--ASELTLQAARGGGCTPPGEPGGVGAKPLESSGRRHLADASTQANRGPGPLS----SGPARTRRVSVTPSAGSFALWNA-GTGKSGSSPSTGGLSIGGAVAAAALVGATAAALSGHDGHRLASSFSRWARDTDRARAXXXXXXXDEALAGARREAERERKAWESVQAALEGSAAARER 789          
BLAST of mRNA_P-fluviatile_contig1.254.1 vs. uniprot
Match: A0A6H5KTU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU3_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 2.290e-57
Identity = 264/636 (41.51%), Postives = 308/636 (48.43%), Query Frame = 0
Query:   92 ALVALNLSSNELESAAIRSSAPHLGALSSLESLDLSCNRIDTLLGMPFLPRLSRLIVQYNRLSSLDGVQQSLASSLTHLDAKNNRIAGPTSAHTPHLAALGRLKSLVLASPGRAGGGHPNAVCACQGYRRDVFAAARSLQMLDGEAAAAVADDDDADDNGPEIA---------DADGGRGAGGGXXAATNDGRDEARAXXXXXXKRAVR-AGVVAAPEEVPTMPRFEAL-AGRFRSRRRSXXXXXXXXXXXXXXXXXXQGYWDDGDRSPGD--------------VSSSSADCDESFSSDAGWTYDDGGGDGRXXXXXXXGTLADYDPDRPERGVAAAXXXXXAASRLHPDETDAGVAAVGRKIGQKRAKLASEGSSDESKGLGGVDLPEDDAEEECGLLSRLRSVAQEARLEVMDSRLQDLH---AHDAA--AAXXXXXXXTSRRGTAGSSRSREYESIAHVAGRGGGRSNSWAHXXXXXXXXXXXXXXXXRQVTHLGRYGSRLVLRSGPGSGSTAVGRRSSISGRIAVEADRRRPSRWVDSASQGLALAGGWSRGVGGAAGLGPGG----GGPTTPAVATAVAKGCRPVHFEEASXXXXXXXXXXASCPCCGVQDDDAPELTLSAVGSGSGGAF 693
            AL ALNLSSNEL+  AIRS APHLG L+SLESLDLSCNRID LLG+PFLP L RL+V YNRL+SLDGVQ +LASSLTHLDA++NRIAGP  AH PHLAALGRL+SL LAS GR     PN +CAC+GYR +VFAAARSL+ LDGE+A+ V +D +      E A                    XX        E R       + A+  A V  A   +P          G        XXXXXXXXXXXXXXXXX  G   +G    G               V+  SA   ES SSDAGW+  DG                 +D D    GV  +        R+  +ET A  A  GR+ G    +   +G S   + LG      +D  EE GLLSRLRSVAQEARLEVMDSRLQDLH   A D A  AA         RR  + ++R + +E+ A    R   RSN W                  R V      GS + LRS   +G+TAV             ADR  P RW                G G  A +G GG    GG T P VA A   G       E S          A C CC  + +D PELTL A G G   A 
Sbjct:   10 ALTALNLSSNELDGEAIRSCAPHLGPLASLESLDLSCNRIDGLLGLPFLPGLRRLLVPYNRLTSLDGVQ-ALASSLTHLDARDNRIAGPAGAHAPHLAALGRLESLALASVGRGRRVQPNPICACRGYREEVFAAARSLKTLDGESASFVLEDRETAATPAEAAAKXXXXXXXXXXXXXXXXXXXXXXDTPAASEPRGGRNAAAETAIPVAAVRRASGPIPXXXXXXXXXCGGGXXXXXXXXXXXXXXXXXXXXXXXRPGVAAEGGGGRGRCLXXXXXXXTSSPRVAVQSAGV-ESSSSDAGWSEGDG-------DSLQESHAEGFDAD--SFGVVES------GGRVDTEET-AARAVPGRRTGGGGGRGNFDGESGVREVLG------EDVAEEHGLLSRLRSVAQEARLEVMDSRLQDLHDKQAQDTARHAATVAKATAALRRSVSNTTRGQTHEAGAAGPTRRTSRSNPWNQHGAPQQRGVAGKGVVPRTVRG---EGSTVPLRS---NGNTAV-------------ADR--PVRWT--------------HGPGDFAAIGKGGFGSRGGVTQPQVAVA---GPEVACGREGSVA--------ARCSCC--RGEDTPELTLQAAGGGGSSAL 573          
BLAST of mRNA_P-fluviatile_contig1.254.1 vs. uniprot
Match: A0A835ZJ80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ80_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.790e-20
Identity = 80/211 (37.91%), Postives = 114/211 (54.03%), Query Frame = 0
Query:   41 AARSLNALNENIRSVQEINFAAYGVAR--------PSTLISLSLHSNRVSSLEGLSSLTALVALNLSSNELESAAIRSSAPHLGALSSLESLDLSCNRIDTLLGMPFLPRLSRLIVQYNRLSSLDGVQQSLASSLTHLDAKNNRIAGPTSAHTPHLAALGRLKSLVLASPGRAGGGHPNAVCACQGYRRDVFAAA--RSLQMLDGEAAAAV 241
            A  SL  +   + S+Q++       A         P  L+SL+LH N ++SL+GL    +L  L+LSSN+L +A+I + APHLG L SL +L L+ NR+  L+G+P L  L  L++ YN L+SL+G+Q +LA  L  LD + N +A P + H   L +L  L+ L L S   A G   N VC    Y     AAA    L+ LDG    A+
Sbjct:   29 AGTSLTLIGAGLTSIQQLTLRLQTSATADETPSRSPQHLLSLNLHGNALTSLQGLERYPSLTQLDLSSNDLTTASIAACAPHLGHLHSLSTLSLAANRVGALVGLPCLAHLHTLLLPYNALTSLEGLQ-ALAPRLRTLDLRANALAPPLAPHARVLVSLSSLRDLALRS---ADGACANPVCLEPAYGAAALAAAGVARLERLDGREVGAL 235          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FK56_ECTSI8.760e-12145.67Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KTU3_9PHAE2.290e-5741.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZJ80_9STRA5.790e-2037.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 112..247
e-value: 1.2E-18
score: 68.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 32..111
e-value: 1.1E-5
score: 26.4
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 49..582
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 60..200
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 166..186
score: 4.801
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 142..163
score: 5.871
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 92..113
score: 5.125
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 120..141
score: 8.536
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 70..91
score: 8.205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3137976..3144422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.254.1mRNA_P-fluviatile_contig1.254.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 3118478..3144651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.254.1 ID=prot_P-fluviatile_contig1.254.1|Name=mRNA_P-fluviatile_contig1.254.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=874bp
MISRRRAAPQASPASLRSVGGEGTRNRATDVSRVDVHETNAARSLNALNE
NIRSVQEINFAAYGVARPSTLISLSLHSNRVSSLEGLSSLTALVALNLSS
NELESAAIRSSAPHLGALSSLESLDLSCNRIDTLLGMPFLPRLSRLIVQY
NRLSSLDGVQQSLASSLTHLDAKNNRIAGPTSAHTPHLAALGRLKSLVLA
SPGRAGGGHPNAVCACQGYRRDVFAAARSLQMLDGEAAAAVADDDDADDN
GPEIADADGGRGAGGGDGAATNDGRDEARASRGSDQKRAVRAGVVAAPEE
VPTMPRFEALAGRFRSRRRSAGGGAGGCSGGGAGVGRGQGYWDDGDRSPG
DVSSSSADCDESFSSDAGWTYDDGGGDGRGSGGDGVGTLADYDPDRPERG
VAAAAVAAAAASRLHPDETDAGVAAVGRKIGQKRAKLASEGSSDESKGLG
GVDLPEDDAEEECGLLSRLRSVAQEARLEVMDSRLQDLHAHDAAAAAATI
AAATSRRGTAGSSRSREYESIAHVAGRGGGRSNSWAHHHHHHHQQQQQQQ
QQQRQVTHLGRYGSRLVLRSGPGSGSTAVGRRSSISGRIAVEADRRRPSR
WVDSASQGLALAGGWSRGVGGAAGLGPGGGGPTTPAVATAVAKGCRPVHF
EEASSSSSPPPPPEASCPCCGVQDDDAPELTLSAVGSGSGGAFSRPPESS
ASKHLSDASTQADRGPSGAATLRLSGVARTDRAAASAAAASGTTAKARGP
ADPGGGRRSATAAALAAALAAGAAVATRRTLDDRRLAVCFLRWAREADRA
KAAAAAAAGAAAAAAARQDAARERQAWQSLRATLEESAAARERGQGSRGG
GGAEGAEVGVGDLSVGGRGRGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt