prot_P-fluviatile_contig1.251.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.251.1
Unique Nameprot_P-fluviatile_contig1.251.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length723
Homology
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BLAST of mRNA_P-fluviatile_contig1.251.1 vs. uniprot
Match: D7FK60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK60_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 3.070e-41
Identity = 296/564 (52.48%), Postives = 333/564 (59.04%), Query Frame = 0 
Query:  122 SSPRGLSLRSRPAEDGKQFVREVSQLGARGNWRGALARLLDAEEDGACVNRIMYNATIAALAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRKTSGGGGSGGTKPNMWCFHTVLAALAKGGQYRRALSIVEVDMPEEGVVPDLRAWQTLLDACRASTESGHEAVALLSRMRTSGCEPDIWCFNHCLNAASRGGEWELALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVLLDAMMAAESXXXXXXXXXXXXXXXXXXXXXXXKGLGILREAMPAAGXXXXXXXXXXXXXXXXXXXXXXVALNLWDEMRSLSLVP---NAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IAAFLGPRGGGGGEAAVVMGPKEFGVVLGLIEEMRESGVPPTNVSHSVAITVCAAGGRHQLAMRLFEELKGSGQTPNEAVFNAVIGSCTRASGGXXXXXXXXXXXXXXQWRTALKLLKEMEATGVPPRLTAFNRAIRACCD 681
            S PR L LR+RPAEDGK+FVR   +LG +G W   L+ L  AE DGA VN IMYNA I AL+K XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   R T+  GG    KPNM CF+TVLAA AK G+ R+ALS+VE DM   G                                                      GEWELA  +     XXXXXXXXXXXXXXXXXXXXXXXXXX P LL AM    S   XXXXXXXXXXXXXXXXXXXX  + +LR+ MPAAG  X   XXXXXXXXXXXXXXXX    LWDE R+ +L P   N+H XXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXX                IAAF G +           G +E  + LGL+EEM+  G+PPT+ SHS AI +C    +H+ A+ LFEEL+ SGQ  +E  F A+I SC R SG               +W TA+ LL EMEA+GV P +  FN AIRACC+
Sbjct:   81 SPPRRL-LRNRPAEDGKRFVRVAQRLGGQGKWERVLSLLRQAEGDGAVVNHIMYNAAIGALSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEACRAARGGRPDEAYGILSRMTARTGGKS-VKPNMRCFNTVLAAFAKSGRSRQALSLVEEDMVNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEWELAFGLLEDMGXXXXXXXXXXXXXXXXXXXXXXXXXXXPALLRAMKEGGSTAPXXXXXXXXXXXXXXXXXXXXXXVSLLRKDMPAAGVAXDVTXXXXXXXXXXXXXXXXXXXALWDEARA-ALPPSALNSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGLPPNLRSXXXXXXXXXXXXXXXXXXXXXXXMEEAGLEPDVVSFTSAIAAFRGGKAAXXXXXXXXXGERELSLALGLLEEMKSRGLPPTSFSHSAAIKLCTDANQHERALELFEELRASGQAADEPAFTAIIDSCARHSGSGSGGGEG-------RWETAVALLDEMEASGVAPSVATFNGAIRACCN 634
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK60_ECTSI3.070e-4152.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 324..437
e-value: 4.9E-20
score: 73.6
coord: 438..546
e-value: 2.0E-28
score: 101.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 138..303
e-value: 2.0E-33
score: 118.0
coord: 562..721
e-value: 1.0E-31
score: 112.4
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 572..712
e-value: 5.3E-9
score: 35.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 171..218
e-value: 1.4E-9
score: 38.0
coord: 427..474
e-value: 6.4E-8
score: 32.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 501..534
e-value: 1.1E-6
score: 26.4
coord: 466..498
e-value: 3.4E-4
score: 18.6
coord: 323..356
e-value: 3.1E-5
score: 21.9
coord: 251..284
e-value: 0.0019
score: 16.3
coord: 672..704
e-value: 2.0E-4
score: 19.3
coord: 174..206
e-value: 5.7E-6
score: 24.2
coord: 431..464
e-value: 2.1E-6
score: 25.6
coord: 208..235
e-value: 1.4E-4
score: 19.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 308..368
e-value: 6.6E-7
score: 29.3
coord: 493..544
e-value: 1.3E-4
score: 22.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 668..702
score: 9.734
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 648..667
score: 5.481
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 703..722
score: 5.064
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 355..389
score: 5.525
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..319
score: 9.208
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 320..354
score: 9.767
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 463..497
score: 8.912
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 582..616
score: 8.649
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 248..283
score: 9.131
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 171..205
score: 11.488
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 428..462
score: 9.92
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 206..236
score: 10.326
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 392..427
score: 8.133
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 498..532
score: 11.805
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 246..393
coord: 648..718
coord: 358..544
coord: 275..486
coord: 567..630
coord: 171..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3093119..3095576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.251.1mRNA_P-fluviatile_contig1.251.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 3093069..3096312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.251.1 ID=prot_P-fluviatile_contig1.251.1|Name=mRNA_P-fluviatile_contig1.251.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=723bp
MAAHARTRAIQTRLCSRWGVTAACRSGVGSAAPASLQERRDATSRRAITR
HGQTPTTPTPTVSPIPCMCGCRWHSSSAAAPPGGISSSPRPPPPPAWGFA
RPRPSPPAAAAAAPAGGAPVSSSPRGLSLRSRPAEDGKQFVREVSQLGAR
GNWRGALARLLDAEEDGACVNRIMYNATIAALAKSGRWAEAVEILDRMEA
RGVLLDVVTFSSAMSACCAAGKADEAYDLLSRMRKTSGGGGSGGTKPNMW
CFHTVLAALAKGGQYRRALSIVEVDMPEEGVVPDLRAWQTLLDACRASTE
SGHEAVALLSRMRTSGCEPDIWCFNHCLNAASRGGEWELALSVLEGMSEA
GVQPDCWSFSSAMRACANAEEWQMVPVLLDAMMAAESGATPNVWNFNICI
DAHAKMEEWQKGLGILREAMPAAGVSPTVATYASCMDAAGKVGEWEVALN
LWDEMRSLSLVPNAHAYNIAIDVCGKAGQVDRALALYTGSHAAGFPADLL
TFNTAIDACARAGRWQDALTVLRDVGRAGLKPDVISYTSAIAAFLGPRGG
GGGEAAVVMGPKEFGVVLGLIEEMRESGVPPTNVSHSVAITVCAAGGRHQ
LAMRLFEELKGSGQTPNEAVFNAVIGSCTRASGGGDGDGDGRGGGGGGQW
RTALKLLKEMEATGVPPRLTAFNRAIRACCDGGRWDLGYSVLGKMRLDGV
DPDVTSMNALIKGLVRGNSGRH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long
IPR002885Pentatricopeptide_repeat