prot_P-fluviatile_contig1.212.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.212.1
Unique Nameprot_P-fluviatile_contig1.212.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length211
Homology
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BLAST of mRNA_P-fluviatile_contig1.212.1 vs. uniprot
Match: D7G071_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G071_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 3.260e-91
Identity = 149/211 (70.62%), Postives = 171/211 (81.04%), Query Frame = 0 
Query:    5 RAIAGGAVAVLTVLLRHHQ-GQAFFVGRAAAGSLVYRAPATAVATSAVSAQRRSRRP----ARLTATMTPPEKTEVVSVLNDDGSRKTGEQIREEYFMAALTGQERGLPAGSYLNDTVEAGPGVPEVTIVWQPYEDQVLAPAGSSLLRSAISCGAMTIDNTFCLTGQCEACMAEIDGEVVLSCMVPVPSDGRSDVEALVCNSDAAWEDMMV 210
            RA+A  AVA   V L H Q GQAFFVG  A    + R    +   +A S  ++ RR     ARLTATM P E+T+ V+VLNDDG+RK+GEQIREE+FMAA+TGQERGLP GSYLNDTVEAGPGV +V++VWQPYED+VLAPAGSSLL+SA  CGAM IDNTFCLTGQCEACMAE+DGEVVLSCMVPVP+DGR+DVEALVCNSDAAW+DMMV
Sbjct:    5 RAVAASAVAAFGVFLSHQQRGQAFFVGTPAVD--LRRTAVYSRGLAAGSISKKGRRAGVVRARLTATMAP-EQTDTVNVLNDDGTRKSGEQIREEFFMAAMTGQERGLPPGSYLNDTVEAGPGVEQVSVVWQPYEDKVLAPAGSSLLKSATECGAMVIDNTFCLTGQCEACMAEVDGEVVLSCMVPVPADGRTDVEALVCNSDAAWDDMMV 212
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BLAST of mRNA_P-fluviatile_contig1.212.1 vs. uniprot
Match: A0A388KU81_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KU81_CHABU)

HSP 1 Score: 79.0 bits (193), Expect = 5.780e-16
Identity = 37/70 (52.86%), Postives = 52/70 (74.29%), Query Frame = 0 
Query:  142 GSSLLRSAISCGAMTIDNTFCLTGQCEACMAEID-GEVVLSCMVPVPSDGRSDVEALVCNSDAAWEDMMV 210
            GS++L++A+  GA+TIDN FCLTGQC+ C  E++ GE++ SCM  +PS G+S +  LV +SD AWE M V
Sbjct:    4 GSNILKAAVEAGALTIDNRFCLTGQCDVCCVEMEHGEIIRSCMHAIPS-GKSSITVLVVDSDEAWEAMSV 72
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BLAST of mRNA_P-fluviatile_contig1.212.1 vs. uniprot
Match: A0A2K1IZK8_PHYPA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IZK8_PHYPA)

HSP 1 Score: 66.6 bits (161), Expect = 2.960e-10
Identity = 45/124 (36.29%), Postives = 61/124 (49.19%), Query Frame = 0 
Query:  103 QERGLPAGSYLNDTVEAGPGVPEVTIVWQPYEDQVLAPA--GSSLLRSAISCGAMTIDNTFCLTGQCEACMAEIDG--------------EVVLSCMVPVPSDGRSDVEALVCNSDAAWEDMMV 210
            +E  +P G Y  D  E G    EV + +    + V   A  G +LL+ A  CGA+ I + FC  G C  C  E++G              E+V SC+ PVPS GR  VE  + NSD  W+D+MV
Sbjct:   52 KESAIP-GMYWGDRTEIGE---EVAVKFTTGSETVTVSANVGDNLLKVAEQCGAIVISDDFCFEGSCCHCEMEVNGGAVEVGYRAEVKGGELVRSCLCPVPS-GRRTVEVNIINSDDGWDDLMV 170
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BLAST of mRNA_P-fluviatile_contig1.212.1 vs. uniprot
Match: A9RMX1_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RMX1_PHYPA)

HSP 1 Score: 66.6 bits (161), Expect = 6.140e-10
Identity = 45/124 (36.29%), Postives = 61/124 (49.19%), Query Frame = 0 
Query:  103 QERGLPAGSYLNDTVEAGPGVPEVTIVWQPYEDQVLAPA--GSSLLRSAISCGAMTIDNTFCLTGQCEACMAEIDG--------------EVVLSCMVPVPSDGRSDVEALVCNSDAAWEDMMV 210
            +E  +P G Y  D  E G    EV + +    + V   A  G +LL+ A  CGA+ I + FC  G C  C  E++G              E+V SC+ PVPS GR  VE  + NSD  W+D+MV
Sbjct:   95 KESAIP-GMYWGDRTEIGE---EVAVKFTTGSETVTVSANVGDNLLKVAEQCGAIVISDDFCFEGSCCHCEMEVNGGAVEVGYRAEVKGGELVRSCLCPVPS-GRRTVEVNIINSDDGWDDLMV 213
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G071_ECTSI3.260e-9170.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A388KU81_CHABU5.780e-1652.86Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A2K1IZK8_PHYPA2.960e-1036.292Fe-2S ferredoxin-type domain-containing protein n... [more]
A9RMX1_PHYPA6.140e-1036.29Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.468
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 126..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:2695581..2699376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.212.1mRNA_P-fluviatile_contig1.212.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 2694519..2699385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.212.1 ID=prot_P-fluviatile_contig1.212.1|Name=mRNA_P-fluviatile_contig1.212.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=211bp
MGPGRAIAGGAVAVLTVLLRHHQGQAFFVGRAAAGSLVYRAPATAVATSA
VSAQRRSRRPARLTATMTPPEKTEVVSVLNDDGSRKTGEQIREEYFMAAL
TGQERGLPAGSYLNDTVEAGPGVPEVTIVWQPYEDQVLAPAGSSLLRSAI
SCGAMTIDNTFCLTGQCEACMAEIDGEVVLSCMVPVPSDGRSDVEALVCN
SDAAWEDMMV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf