mRNA_P-fluviatile_contig99.15517.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig99.15517.1
Unique NamemRNA_P-fluviatile_contig99.15517.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 8.380e-159
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 1
Query:    1 QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 687
            QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTR+YEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR
Sbjct:   12 QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 240          
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 8.460e-156
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 1
Query:    1 QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 687
            QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTR+YEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR
Sbjct:  253 QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 481          
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Match: A0A6H5KKS3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS3_9PHAE)

HSP 1 Score: 431 bits (1109), Expect = 6.940e-151
Identity = 213/214 (99.53%), Postives = 214/214 (100.00%), Query Frame = 1
Query:    1 QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRL 642
            QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTR+YEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRL
Sbjct:   26 QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRL 239          
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 1.920e-105
Identity = 157/230 (68.26%), Postives = 191/230 (83.04%), Query Frame = 1
Query:    1 QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 687
            +KAC A+  GMSVRKAA V+ + R S++ R  G+VAM+AKVG  T++S+EEE+S+ED LL+A RN LAV R+HL + VR LC D R+ PWDPEKGPGKDWLAGF  RHPRV ER+TR+YEANR+T++ EPR+V+FY +WAALL++ KPEA+HVHNTDETGTTPQG KT KA+ ++GQKVV S+RANSRENTT+V TISADG TWAPTIIFKGQRLQ D F E+NGP  AR
Sbjct:   12 RKACAAIDDGMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVERNGPEGAR 241          
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 5.230e-104
Identity = 152/230 (66.09%), Postives = 188/230 (81.74%), Query Frame = 1
Query:    1 QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 687
            +KA  A+  GMSVRKAA+V+ + R S++ R  G+VAM+AKVGP T++S EEE+S+ED LL A RN LAV R+HL + VR LC D R+ PWDPEKGPGKDWL GFL RHPRV ER+TR+YEANR+T++ EPR+V+FY +WAAL +++KP+A+HVHNTDETGTTPQG KT KA+ ++GQKVV S+R+NSREN T+V TISADG TWAPTI FK QRLQ DWF E+NGP  AR
Sbjct:   12 RKAFAAIDNGMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALHDEVKPKANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRSNSRENITVVATISADGHTWAPTITFKRQRLQVDWFVERNGPEGAR 241          
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 8.480e-101
Identity = 157/232 (67.67%), Postives = 182/232 (78.45%), Query Frame = 1
Query:   76 SLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGP---------------------------GKDWLAGFLERHPRVRERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 687
            S+K RLDG VAM AKVGP TV+SE+EENS+ED LLYAGR+CLAV RLHLLETVR LC D R  PWDPEK                             GKDWLAGFL+RHPRV ERTTR+YE+NR+T+++EP IVE Y+K AA+L++ KP+ADHVHNTDETG TPQG KTMKA+ +AGQKVVES+R+NS ENTT+VTTISA+G+TWAPTIIFKGQRLQPDWFAE+NGP DAR
Sbjct:    5 SIKSRLDGAVAMKAKVGPATVLSEQEENSLEDVLLYAGRHCLAVGRLHLLETVRQLCNDSRPIPWDPEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKDWLAGFLKRHPRVSERTTRIYESNRITEDNEPCIVELYKKLAAILDEHKPKADHVHNTDETGPTPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDAR 236          
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 7.010e-87
Identity = 141/244 (57.79%), Postives = 181/244 (74.18%), Query Frame = 1
Query:    1 QKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTT-------PQGNKTMKAYCQAGQ-------KVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 687
            +KAC A+  GMSVRKAA+V+ + R S+  R  G+ AM+AKVGP T++S+EEE+S+E  LL+A RN LAV R++L + VR LC D R+ PWDPEKGPGKDWLAGFL RH RV ER+TR++EAN +T++ EPR+V+FY +WAALL+++KPEA+HVHNTDET          P+  +  +A+            KVV S+R+NSRENTT+V TISADG TWAPTIIFKGQRLQ DWF E+NG   A+
Sbjct:   12 RKACAAIDDGMSVRKAAEVFGVGRTSIVDRRRGKAAMNAKVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERWAALLDEVKPEANHVHNTDETEPPRXHRRKGPEAAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGLEGAK 255          
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Match: A0A6H5KHG4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG4_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 1.340e-86
Identity = 131/172 (76.16%), Postives = 149/172 (86.63%), Query Frame = 1
Query:  175 LLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 687
            LLYAGR+CLAV RLHLLET R LC D R   WDP K PGKDWLAGFL+RHPRV ERTTR+YE+NR+T++ EPR VE+Y+KWAAL ++ KPEADHVHNTDETGTTPQG KTMKA+ + GQKVVES+R+NSREN T+VTTIS +G TWAPTIIFKGQRLQ DWFAE+NGP DAR
Sbjct:    8 LLYAGRHCLAVGRLHLLETDRQLCNDGRSITWDPGKRPGKDWLAGFLKRHPRVSERTTRIYESNRITEDKEPRNVEYYKKWAALFDEHKPEADHVHNTDETGTTPQGTKTMKAFAEVGQKVVESMRSNSRENATVVTTISTNGVTWAPTIIFKGQRLQLDWFAERNGPKDAR 179          
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Match: A0A6H5KNQ5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ5_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 6.540e-80
Identity = 131/220 (59.55%), Postives = 167/220 (75.91%), Query Frame = 1
Query:   31 MSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 687
            MSVRKAA+V+ + R S++ R  G+VAM+AKVGP T++S+EE++ ++D LL+A RN LAV RLHL + VR LC D R+ PWDPEK PGKDWLAGFL RHPRV ER+TR+YEANR+T++ EP +V+FY +WAAL       +   +    T T     +T +A+ ++GQKVV S+R+NSRENTT+V TISADG TWAPTIIFKGQRLQ DWF E+NGP  AR
Sbjct:    1 MSVRKAAEVFGVGRTSIEDRCPGKVAMNAKVGPETILSKEEDSLLKDILLFAARNFLAVDRLHLGDAVRQLCDDGRRIPWDPEKVPGKDWLAGFLRRHPRVAERSTRIYEANRITEDEEPHMVQFYERWAAL-------STRSNRRPTTCTI----RTRQAFAESGQKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAR 209          
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 2.200e-75
Identity = 126/231 (54.55%), Postives = 164/231 (71.00%), Query Frame = 1
Query:    1 QKACEAVRGG-MSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 687
            QKA EAVR G MS+R AA+ Y +++ SL RRL G+ +MDAKVGP TV++ EEE+ +ED LLYA R+ + + R  L E VR LC D R  PWD   GPG+ WL GF +RHP + ER+ R+YEANR+  + E R+  FY+ +   ++  K  ADH+ NTDETG+T QG KTMK   ++GQKV  ++R+NSREN T+V TISA G+T AP II+KGQRLQ DW   +NGPP+AR
Sbjct:   12 QKAIEAVRSGAMSLRAAAQAYGVNKRSLSRRLTGDESMDAKVGPRTVLTVEEESFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNAR 242          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig99.15517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV04_9PHAE8.380e-15999.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ12_9PHAE8.460e-15699.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKS3_9PHAE6.940e-15199.53HTH psq-type domain-containing protein (Fragment) ... [more]
A0A6H5JFM5_9PHAE1.920e-10568.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ62_9PHAE5.230e-10466.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBS6_9PHAE8.480e-10167.67DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JRA3_9PHAE7.010e-8757.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHG4_9PHAE1.340e-8676.16DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KNQ5_9PHAE6.540e-8059.55DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L5E2_9PHAE2.200e-7554.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig99contigP-fluviatile_contig99:31738..32903 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score92.8
Seed ortholog evalue2.1e-16
Seed eggNOG ortholog6087.XP_004206633.1
EggNOG OGs2EY8J@1,2SZSV@2759,3AURG@33154
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size890
Cds size660
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig99.15517.1prot_P-fluviatile_contig99.15517.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig99 31768..32703 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817362.5123663-UTR-P-fluviatile_contig99:31737..317671622817362.5123663-UTR-P-fluviatile_contig99:31737..31767Porterinema fluviatile SAG_2381UTRP-fluviatile_contig99 31738..31767 +
1693572247.7403252-UTR-P-fluviatile_contig99:31737..317671693572247.7403252-UTR-P-fluviatile_contig99:31737..31767Porterinema fluviatile SAG_2381UTRP-fluviatile_contig99 31738..31767 +
1622817362.557215-UTR-P-fluviatile_contig99:32703..329031622817362.557215-UTR-P-fluviatile_contig99:32703..32903Porterinema fluviatile SAG_2381UTRP-fluviatile_contig99 32704..32903 +
1693572247.7677667-UTR-P-fluviatile_contig99:32703..329031693572247.7677667-UTR-P-fluviatile_contig99:32703..32903Porterinema fluviatile SAG_2381UTRP-fluviatile_contig99 32704..32903 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817362.53234-CDS-P-fluviatile_contig99:31767..322121622817362.53234-CDS-P-fluviatile_contig99:31767..32212Porterinema fluviatile SAG_2381CDSP-fluviatile_contig99 31768..32212 +
1693572247.7518005-CDS-P-fluviatile_contig99:31767..322121693572247.7518005-CDS-P-fluviatile_contig99:31767..32212Porterinema fluviatile SAG_2381CDSP-fluviatile_contig99 31768..32212 +
1622817362.5459666-CDS-P-fluviatile_contig99:32488..327031622817362.5459666-CDS-P-fluviatile_contig99:32488..32703Porterinema fluviatile SAG_2381CDSP-fluviatile_contig99 32489..32703 +
1693572247.7597346-CDS-P-fluviatile_contig99:32488..327031693572247.7597346-CDS-P-fluviatile_contig99:32488..32703Porterinema fluviatile SAG_2381CDSP-fluviatile_contig99 32489..32703 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig99.15517.1

>prot_P-fluviatile_contig99.15517.1 ID=prot_P-fluviatile_contig99.15517.1|Name=mRNA_P-fluviatile_contig99.15517.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=220bp
MSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLL
YAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRV
RERTTRVYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGT
TPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFK
GQRLQPDWFAEKNGPPDAR*
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mRNA from alignment at P-fluviatile_contig99:31738..32903+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig99.15517.1 ID=mRNA_P-fluviatile_contig99.15517.1|Name=mRNA_P-fluviatile_contig99.15517.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1166bp|location=Sequence derived from alignment at P-fluviatile_contig99:31738..32903+ (Porterinema fluviatile SAG_2381)
CAGAAGGCTTGTGAAGCCGTGAGAGGTGGCATGTCCGTTAGGAAGGCTGC TAAGGTCTATGATATTGATCGGCTTTCGCTCAAACGGCGCCTCGATGGAG AGGTGGCCATGGATGCAAAAGTAGGTCCTGGGACTGTCATGAGTGAGGAG GAGGAAAATTCGATTGAAGATTGTCTGCTGTACGCTGGTCGTAACTGCCT AGCTGTGAGTCGGCTCCACCTGCTGGAAACCGTAAGACTGCTCTGCCTGG ACCGCAAGACCCCGTGGGATCCAGAGAAGGGCCCGGGGAAGGATTGGCTA GCTGGCTTCCTCGAAAGGCACCCGCGGGTTAGGGAGCGCACCACTCGCGT CTACGAGGCCAACAGAGTCACCGATGAGAGCGAACCTCGCATCGTAGAGT TCTACAGGAAGTGGGCAGCTCTCCTCGAGGACCTCAAGCCGGAGGCCGAC CACGTGCACAACACGGATGAGACAGGTGAGATGTACCTGTAGACTAGTCT AGACTAGTGTGGTATCAACAGGAGCTGTATTAGGCGAGCTCCTGTGCAAA GATCTCGAAGGTAGCATGTCAATATCTGGCGGAGTTCTGCCGTCGGCCGG ACTTGCGTGCGGCGTTTTGGTGTACACAGCAGTATCTACTCTAGGACCCG GTCTTCATTGCATGGTTTTGTGCGTGGGTAAACCTTCGCATCTTGTATGT GCCTTTACGTTTCTCTCCCCCTGTTCTCCTCCTCTCTCGCGATTGATTTA GGTACCACTCCGCAAGGCAACAAGACCATGAAGGCCTACTGTCAGGCAGG GCAGAAGGTGGTCGAGTCGGTTCGGGCCAACTCGCGAGAGAACACCACCT TGGTCACCACCATCAGCGCTGATGGCTCCACGTGGGCGCCGACTATCATC TTCAAAGGGCAGCGACTCCAGCCTGACTGGTTTGCGGAGAAGAACGGGCC GCCGGACGCGAGGTAGTCTACACTTGTACGGATTCTTCGTTCATGCAGGG TAACGTGTTCATCAAGTACCTTAAAGACTTCCACCAGCAGCTTTGCAAAC GAGGCGTGATCGACGGAAAGCCGCACATCCTCCTGCTTGATGGACACGCA TCGCACGTGAGCGTCGAGGTCATCCAACTGGCCATGGAACTCAACATCGT CCTCTTTCAGCTGCCG
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Coding sequence (CDS) from alignment at P-fluviatile_contig99:31738..32903+

>mRNA_P-fluviatile_contig99.15517.1 ID=mRNA_P-fluviatile_contig99.15517.1|Name=mRNA_P-fluviatile_contig99.15517.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1320bp|location=Sequence derived from alignment at P-fluviatile_contig99:31738..32903+ (Porterinema fluviatile SAG_2381)
ATGTCCGTTAGGAAGGCTGCTAAGGTCTATGATATTGATCGGCTTTCGCT
CAAACGGCGCCTCGATGGAGAGGTGGCCATGGATGCAAAAGTAGGTCCTG
GGACTGTCATGAGTGAGGAGGAGGAAAATTCGATTGAAGATTGTCTGCTG
TACGCTGGTCGTAACTGCCTAGCTGTGAGTCGGCTCCACCTGCTGGAAAC
CGTAAGACTGCTCTGCCTGGACCGCAAGACCCCGTGGGATCCAGAGAAGG
GCCCGGGGAAGGATTGGCTAGCTGGCTTCCTCGAAAGGCACCCGCGGGTT
AGGGAGCGCACCACTCGCGTCTACGAGGCCAACAGAGTCACCGATGAGAG
CGAACCTCGCATCGTAGAGTTCTACAGGAAGTGGGCAGCTCTCCTCGAGG
ACCTCAAGCCGGAGGCCGACCACGTGCACAACACGGATGAGACAGATGTC
CGTTAGGAAGGCTGCTAAGGTCTATGATATTGATCGGCTTTCGCTCAAAC
GGCGCCTCGATGGAGAGGTGGCCATGGATGCAAAAGTAGGTCCTGGGACT
GTCATGAGTGAGGAGGAGGAAAATTCGATTGAAGATTGTCTGCTGTACGC
TGGTCGTAACTGCCTAGCTGTGAGTCGGCTCCACCTGCTGGAAACCGTAA
GACTGCTCTGCCTGGACCGCAAGACCCCGTGGGATCCAGAGAAGGGCCCG
GGGAAGGATTGGCTAGCTGGCTTCCTCGAAAGGCACCCGCGGGTTAGGGA
GCGCACCACTCGCGTCTACGAGGCCAACAGAGTCACCGATGAGAGCGAAC
CTCGCATCGTAGAGTTCTACAGGAAGTGGGCAGCTCTCCTCGAGGACCTC
AAGCCGGAGGCCGACCACGTGCACAACACGGATGAGACAGGTACCACTCC
GCAAGGCAACAAGACCATGAAGGCCTACTGTCAGGCAGGGCAGAAGGTGG
TCGAGTCGGTTCGGGCCAACTCGCGAGAGAACACCACCTTGGTCACCACC
ATCAGCGCTGATGGCTCCACGTGGGCGCCGACTATCATCTTCAAAGGGCA
GCGACTCCAGCCTGACTGGTTTGCGGAGAAGAACGGGCCGCCGGACGCGA
GGTAGGTACCACTCCGCAAGGCAACAAGACCATGAAGGCCTACTGTCAGG
CAGGGCAGAAGGTGGTCGAGTCGGTTCGGGCCAACTCGCGAGAGAACACC
ACCTTGGTCACCACCATCAGCGCTGATGGCTCCACGTGGGCGCCGACTAT
CATCTTCAAAGGGCAGCGACTCCAGCCTGACTGGTTTGCGGAGAAGAACG
GGCCGCCGGACGCGAGGTAG
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