Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 307 |
| Cds size | 303 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817361.693767-CDS-P-fluviatile_contig97:45602..45905 | 1622817361.693767-CDS-P-fluviatile_contig97:45602..45905 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig97 45603..45905 + |
| 1693572243.228672-CDS-P-fluviatile_contig97:45602..45905 | 1693572243.228672-CDS-P-fluviatile_contig97:45602..45905 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig97 45603..45905 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig97.15511.1 >prot_P-fluviatile_contig97.15511.1 ID=prot_P-fluviatile_contig97.15511.1|Name=mRNA_P-fluviatile_contig97.15511.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=101bp
LPQAPLQHQQSLFLDLALVLDDSATICSIFQLSLQLTDLLSYSVLTGAED
EVLLLERKFCLPSLDNAVFYSINYTGESLGSGIHPRNFCCQRCHRRSNAV
K back to topmRNA from alignment at P-fluviatile_contig97:45603..45907+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig97.15511.1 ID=mRNA_P-fluviatile_contig97.15511.1|Name=mRNA_P-fluviatile_contig97.15511.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=305bp|location=Sequence derived from alignment at P-fluviatile_contig97:45603..45907+ (Porterinema fluviatile SAG_2381)
CTCCCGCAAGCGCCCCTGCAGCACCAGCAGAGTCTCTTCCTGGACCTTGC
GTTGGTCCTGGACGATAGCGCGACGATATGCAGTATCTTTCAACTTAGCC
TCCAGCTGACGGATCTGTTGTCGTACAGTGTTCTCACTGGTGCCGAGGAC
GAAGTCCTCCTTCTGGAGCGAAAGTTCTGCCTCCCTAGCCTTGATAACGC
TGTTTTCTACAGCATCAATTATACCGGTGAGAGCCTCGGCAGTGGCATTC
ACCCTCGCAATTTCTGCTGCCAACGCTGCCACCGGAGGAGCAATGCAGTC
AAGCG back to topCoding sequence (CDS) from alignment at P-fluviatile_contig97:45603..45907+ >mRNA_P-fluviatile_contig97.15511.1 ID=mRNA_P-fluviatile_contig97.15511.1|Name=mRNA_P-fluviatile_contig97.15511.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=606bp|location=Sequence derived from alignment at P-fluviatile_contig97:45603..45907+ (Porterinema fluviatile SAG_2381)
CTCCCGCAAGCGCCCCTGCAGCACCAGCAGAGTCTCTTCCTGGACCTTGC
GTTGGTCCTGGACGATAGCGCGACGATATGCAGTATCTTTCAACTTAGCC
TCCAGCTGACGGATCTGTTGTCGTACAGTGTTCTCACTGGTGCCGAGGAC
GAAGTCCTCCTTCTGGAGCGAAAGTTCTGCCTCCCTAGCCTTGATAACGC
TGTTTTCTACAGCATCAATTATACCGGTGAGAGCCTCGGCAGTGGCATTC
ACCCTCGCAATTTCTGCTGCCAACGCTGCCACCGGAGGAGCAATGCAGTC
AAGCTCCCGCAAGCGCCCCTGCAGCACCAGCAGAGTCTCTTCCTGGACCT
TGCGTTGGTCCTGGACGATAGCGCGACGATATGCAGTATCTTTCAACTTA
GCCTCCAGCTGACGGATCTGTTGTCGTACAGTGTTCTCACTGGTGCCGAG
GACGAAGTCCTCCTTCTGGAGCGAAAGTTCTGCCTCCCTAGCCTTGATAA
CGCTGTTTTCTACAGCATCAATTATACCGGTGAGAGCCTCGGCAGTGGCA
TTCACCCTCGCAATTTCTGCTGCCAACGCTGCCACCGGAGGAGCAATGCA
GTCAAG back to top
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