mRNA_P-fluviatile_contig91.15436.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig91.15436.1
Unique NamemRNA_P-fluviatile_contig91.15436.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 3.910e-80
Identity = 139/301 (46.18%), Postives = 202/301 (67.11%), Query Frame = 2
Query:  326 PDQCKTVREQLMSKFSMTNLGAASLVLGMEIKQGDGYIKVSQGNYVEAVLQRFDFHDANPAPTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVLNLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTGFTDSDFAGDEET--RRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIALHSASQEGVYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHLIRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQFLKLR 1222
            P   + +++QL  KF MT+ G A L+LGMEI Q DG I VSQ  YV  +L ++   D  PA TPG+G  I + P++ ++LS++  K YQ IVGSL++L NT+RW+IG+AV+ L RGM  PT  HM  AKRVLRYLRG PD+P  +R+G  +L  + D+ FAG  E   +RS TG++F+L GGV+S+A+ LQK  +QS+  AE+IA+ +A++E +YL  +L ELG     + +   SDS  A+S +  +M+  R+K I+T+Y L+RQ +  G + +  V +  QL+D+LTKHL + QF+KLR
Sbjct:  398 PSVVQDLKKQLSDKFKMTDGGPAELLLGMEISQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFPCGNIPIH--SDSTGAMSTAGNSMFRGRSKFISTRYWLLRQNVNKGNIVLKFVRSEEQLADILTKHLERVQFVKLR 696          
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 2.400e-74
Identity = 125/286 (43.71%), Postives = 179/286 (62.59%), Query Frame = 2
Query:  359 MSKFSMTNLGAASLVLGMEIKQG--DGYIKVSQGNYVEAVLQRFDFHDANPAPTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVLNLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTGFTDSDFAGDEETRRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIALHSASQEGVYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHLIRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQF 1210
            M  F MT++G    V+G+E+++    G + +SQG Y   +LQR+    ANP  TPG G  +         L  +  +R+Q I GSL+YL   +R+D+ +AV  LTR  A P + HMAAAK +LRYLRG PDLP +Y+KG   L+ FTDS F  + +  RS TG+LF LGGG+IS  A  Q   +Q+T EAEL AL  +++E VY+ N + E+G       V + SDS  AL+++S AM+SSRTKHIA ++  +R+L +  R+ ++H P+   L+D+ TKHLPK +F
Sbjct:    1 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFR-SVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRF 285          
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 5.000e-71
Identity = 126/290 (43.45%), Postives = 183/290 (63.10%), Query Frame = 2
Query:  347 REQLMSKFSMTNLGAASLVLGMEIKQG--DGYIKVSQGNYVEAVLQRFDFHDANPAPTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVLNLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTGFTDSDFAGDEETRRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIALHSASQEGVYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHLIRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQF 1210
            +++LM  F MT++G    V+G+E+++    G + +SQG Y   +LQR+    ANP  TPG G  +         L  +  +R+Q I GSL+YL   +R+D+ +AV  LTR  A P + HMAAAK +LRYLRG PDLP +Y+KG   L+ FTDS F  + +  RS TG+LF LGGG+IS  A  Q   +Q+T EAEL AL  +++E VY+ N + E+G       V + SDS  AL+++S AM+SSRTKHIA ++  +R+L +  R+ ++H P+   L+D+ TKHLPK +F
Sbjct:  434 KKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFR-SVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRF 722          
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.720e-65
Identity = 118/290 (40.69%), Postives = 180/290 (62.07%), Query Frame = 2
Query:  347 REQLMSKFSMTNLGAASLVLGMEIKQG--DGYIKVSQGNYVEAVLQRFDFHDANPAPTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVLNLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTGFTDSDFAGDEETRRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIALHSASQEGVYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHLIRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQF 1210
            +++L  +F MT++G    +LG+++++    G + +SQ +YV  +L+RF   +ANP  TPG G  I  N      L     K YQ + GS++YL   +R+D+ +A L L++  + P + +M AAK VLRYLRGNP LP +Y++G   L  FTDS F  + +  RS TG+LF L GG+IS  A  Q   +QST EAE+ AL  +++E VY+ N + EL        V + SDS  AL+++  AM+S RTKH+A +Y  IR+L+  G++ ++H P+  QL+D+ TK+LPK +F
Sbjct:  401 KKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFG-SVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRF 689          
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.070e-64
Identity = 116/290 (40.00%), Postives = 178/290 (61.38%), Query Frame = 2
Query:  347 REQLMSKFSMTNLGAASLVLGMEIKQG--DGYIKVSQGNYVEAVLQRFDFHDANPAPTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVLNLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTGFTDSDFAGDEETRRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIALHSASQEGVYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHLIRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQF 1210
            +++L  +F MT++G    +LG+++++    G + +SQ +YV   L+RF   +ANP  T G G  I  N      L     K YQ + GS++YL   +++D+ +A L L++  + P + +M AAK VLRYLRGNP LP +Y++G   L  FTDS F  + +  RS TG+LF L GG+IS  A  Q   +QST EAE+ AL  +++E VY+ N + EL        V + SDS  AL+++  AM+S RTKH+A +Y  IR+L+  G++ ++H P+  QL+D+ TK+LPK +F
Sbjct:  193 KKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFG-SVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRF 481          
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 5.750e-64
Identity = 117/290 (40.34%), Postives = 179/290 (61.72%), Query Frame = 2
Query:  347 REQLMSKFSMTNLGAASLVLGMEIKQG--DGYIKVSQGNYVEAVLQRFDFHDANPAPTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVLNLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTGFTDSDFAGDEETRRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIALHSASQEGVYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHLIRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQF 1210
            +++L  +F MT++G    +LG+++++    G + +SQ +YV  +L+RF   +ANP  TPG G  I  N      L     K YQ + GS++YL   +R+D+ +A L L++  + P + +M AAK VLRYLRGNP LP +Y++G   L  FTDS F  + +  RS TG+LF L GG+IS  A  Q   +QST EAE+ AL  +++E VY+ N + EL        V + SDS  AL+++  AM+S RTKH+  +Y  IR+L+  G++ ++H P+  QL+D+ TK+LPK +F
Sbjct:  557 KKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFG-SVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRF 845          
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 8.160e-64
Identity = 115/290 (39.66%), Postives = 177/290 (61.03%), Query Frame = 2
Query:  347 REQLMSKFSMTNLGAASLVLGMEIKQG--DGYIKVSQGNYVEAVLQRFDFHDANPAPTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVLNLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTGFTDSDFAGDEETRRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIALHSASQEGVYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHLIRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQF 1210
            +++L  +F MT++G    +LG+ +++    G + +SQ +YV  +L+RF   +ANP  TPG G  I  N      L     K YQ + GS++YL   +R+D+ +A L L++  + P + +M AAK VLRYLRGNP LP +Y++G   L  FTDS F  + +  RS TG+LF L GG+IS  A  Q   +QST EAE+ AL  +++E VY+ N + EL        V + SDS  AL+++  AM+S RT ++A +   IR+L+  G++ ++H P+  QL+D+ TK+LPK +F
Sbjct:   74 KKELTDRFEMTDMGEVKRILGIGVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFG-SVPINSDSTGALTVAGNAMHSQRT-NVALRCFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRF 361          
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Match: A0A6H5JRF1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF1_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.260e-62
Identity = 137/401 (34.16%), Postives = 200/401 (49.88%), Query Frame = 2
Query:  326 PDQCKTVREQLMSKFSMTNLGAASLVLGMEIKQGDGYIKVSQGNYVEAVLQR---------------------------FDFHDANPAPTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVLNLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTGFTDSDFAGDEET---------------------------------------------------------------------------RRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIALHSASQEGVYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHLIRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQFLKLR 1222
            P   + +++QL  KF MT+ G A L+LGMEI Q D  I VSQ  YV  +L +                           +   D  PA TPG+G  I + P++ ++LS++  K YQ IV SL++L NT+RW+IG+AV+ L RGM  PT  HM  AKRVLRYLRG PD+P  +R+G  +L  + D+ FAG  E                                                                            +RS TG++F+L GGV+S+A+ LQK  +QS+  AE+IA+ +A++E +YL  +L ELG     + +   SDS  A+S +  +M+  R+K I+T+Y L+RQ +  G + +  V +  QL+D+LTKHL + QF+KLR
Sbjct:  115 PSVVQDLKKQLSDKFKMTDGGPAELLLGMEISQRDEEITVSQHKYVMNILDKAEXXXXXXXXXXXXXXXXXXXXXXXXXYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVLSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKCSSTGYTFILAGGVISAASTLQKXNQHMVGAKRVLRYLQGCPDMRLKFRRGQWGDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFPCGNILIH--SDSTGAMSTAGNSMFRGRSKFISTRYWLLRQNVNKGNIVLKFVRSEEQLADILTKHLERVQFVKLR 513          
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Match: A0A6H5L5K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K4_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 1.270e-60
Identity = 110/275 (40.00%), Postives = 168/275 (61.09%), Query Frame = 2
Query:  392 ASLVLGMEIKQG--DGYIKVSQGNYVEAVLQRFDFHDANPAPTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVLNLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTGFTDSDFAGDEETRRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIALHSASQEGVYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHLIRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQF 1210
            A+ +LG+++++    G + +SQ +YV  +L+RF   +ANP  TPG G  I  N      L     K Y+ + GS++YL   +R+D+ +A L  ++  + P + +M AAK VLRYLRGNP LP +Y++G   L  FTDS F  + +  RS TG+ F L GG+IS  A  Q   +QST EAE+ AL  +++E VY+ N + EL        V + +DS  AL+++  AM+S RTKH+A +Y  IR+L   G++ ++H P+  QL+D+ TK+LPK +F
Sbjct:   48 AAXILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYRSMTGSILYLAQCTRFDLSYAALQNSKACSNPAQVNMTAAKHVLRYLRGNPFLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYPFFLAGGLISYGAKTQTRTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFG-SVPINNDSTGALTVAGNAMHSQRTKHVALRYFFIRELALRGQITLHHRPSEHQLADIATKNLPKHRF 321          
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 3.010e-59
Identity = 118/298 (39.60%), Postives = 179/298 (60.07%), Query Frame = 2
Query:  347 REQLMSKFSMTNLGAASLVLGMEIKQG--DGYIKVSQGNYVEAVLQRFDFHDANPAPTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVLNLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTG-------FTDSDFAGDEETRRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIAL-HSASQEGVYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHLIRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQF 1210
            +++L  +F MT++G    +LG+++ +    G + +SQ +YV  +L+RF   +ANP  TPG G  I  N      L     K YQ + GS++YL   +R+D+ +A L L++  + P + +M AAK VLRYLRGNP LP +Y++  + L         FTDS F  + +  RS TG+LF L GG+IS  A  Q   +QST EAE+ AL +SA +  VY+ N + EL        V + SDS  AL+++  AM+S RTKH+A +Y  IR+L+  G++ ++H P+  QL+D+ TK+LPK +F
Sbjct:  780 KKELTDRFEMTDMGEVKRILGIDVPRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAAVYISNFMTELNFKTFG-SVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRF 1076          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig91.15436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J897_9PHAE3.910e-8046.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC04_9PHAE2.400e-7443.71Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF46_9PHAE5.000e-7143.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE1.720e-6540.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQD0_9PHAE1.070e-6440.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE5.750e-6440.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KUJ3_9PHAE8.160e-6439.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRF1_9PHAE1.260e-6234.16Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L5K4_9PHAE1.270e-6040.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJR8_9PHAE3.010e-5939.60Integrase catalytic domain-containing protein n=11... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig91contigP-fluviatile_contig91:33680..34901 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score194.9
Seed ortholog evalue5.2e-47
Seed eggNOG ortholog4538.ORGLA05G0217200.1
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37THH@33090,3GG2K@35493,3IKX9@38820,3M2IR@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1222
Cds size864
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817356.8222766-CDS-P-fluviatile_contig91:33679..345431622817356.8222766-CDS-P-fluviatile_contig91:33679..34543Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 33680..34543 -
1693572213.4718363-CDS-P-fluviatile_contig91:33679..345431693572213.4718363-CDS-P-fluviatile_contig91:33679..34543Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 33680..34543 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817356.838319-UTR-P-fluviatile_contig91:34543..349011622817356.838319-UTR-P-fluviatile_contig91:34543..34901Porterinema fluviatile SAG_2381UTRP-fluviatile_contig91 34544..34901 -
1693572213.4852965-UTR-P-fluviatile_contig91:34543..349011693572213.4852965-UTR-P-fluviatile_contig91:34543..34901Porterinema fluviatile SAG_2381UTRP-fluviatile_contig91 34544..34901 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig91.15436.1prot_P-fluviatile_contig91.15436.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig91 33680..34543 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig91.15436.1

>prot_P-fluviatile_contig91.15436.1 ID=prot_P-fluviatile_contig91.15436.1|Name=mRNA_P-fluviatile_contig91.15436.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=288bp
MSKFSMTNLGAASLVLGMEIKQGDGYIKVSQGNYVEAVLQRFDFHDANPA
PTPGTGKAIGRNPKDTVFLSKDGIKRYQEIVGSLMYLVNTSRWDIGFAVL
NLTRGMAAPTETHMAAAKRVLRYLRGNPDLPTIYRKGSLELTGFTDSDFA
GDEETRRSCTGFLFMLGGGVISSAAVLQKTISQSTTEAELIALHSASQEG
VYLLNLLRELGVDIATVEVKLLSDSMSALSLSSQAMYSSRTKHIATKYHL
IRQLIESGRVRVNHVPTILQLSDLLTKHLPKPQFLKLR
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mRNA from alignment at P-fluviatile_contig91:33680..34901-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig91.15436.1 ID=mRNA_P-fluviatile_contig91.15436.1|Name=mRNA_P-fluviatile_contig91.15436.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1222bp|location=Sequence derived from alignment at P-fluviatile_contig91:33680..34901- (Porterinema fluviatile SAG_2381)
GCATCGAAAGGTCTACACGTCGAACACTTGGACGTCAAGACGGCGTTCCT CAACGCGCCGGTCGAGGAGGACGTCTGGGTGCAACAAGCCCCGGATTCGA GGAAACTCACCCGGAAACAGGCAAGCCGCAAGTACTTAAACTACGCAAGT CTTTGTACGGACTGCGGCAGAGCCCGCGTAACTGGAACTCAACCTTTGCG CGCGCCATCGAAAGCATAGGATTCAGTCCGATCTTTTCGGATCCGTGCGT TTACGTCTACGGAAGCGGCGACACTTACGTCGTACTCAGCATCTACGTCG ATGACGTACTTCTTCTCGGGGTTAACCCGACCAATGCAAGACGGTCCGGG AGCAGCTCATGAGCAAGTTCTCCATGACCAATCTTGGAGCAGCCAGCCTT GTACTCGGAATGGAGATCAAGCAAGGCGACGGCTACATCAAAGTGTCGCA AGGGAACTACGTCGAAGCTGTGCTACAGCGCTTCGACTTCCACGACGCCA ACCCCGCGCCGACTCCAGGAACCGGCAAAGCCATTGGCCGGAACCCGAAA GATACCGTGTTTCTAAGCAAGGACGGTATCAAGCGCTACCAAGAAATAGT CGGCTCACTCATGTACTTGGTCAACACGTCAAGGTGGGACATCGGTTTTG CAGTACTCAATCTCACGAGGGGAATGGCAGCTCCGACGGAGACCCACATG GCAGCGGCTAAAAGGGTGCTTCGCTACTTGCGTGGAAACCCGGACTTGCC GACCATCTACCGCAAAGGATCGCTGGAGCTGACGGGCTTTACGGACAGCG ACTTCGCGGGCGATGAAGAGACCCGCCGCTCTTGCACCGGTTTCCTGTTT ATGCTGGGGGGTGGCGTGATATCTTCGGCGGCAGTACTTCAGAAGACCAT CTCCCAAAGCACTACGGAGGCGGAACTCATCGCGCTGCACAGCGCGTCTC AGGAAGGTGTGTACCTACTCAACCTGCTGAGAGAACTCGGAGTGGACATC GCCACAGTCGAAGTCAAACTCCTGAGCGACTCTATGAGTGCGCTCAGCCT GAGCAGCCAGGCCATGTATTCATCGCGCACGAAACATATCGCGACGAAGT ACCATCTGATCCGCCAACTGATCGAGAGCGGACGAGTGCGGGTTAACCAC GTCCCCACCATCCTTCAACTCAGCGACCTGCTGACCAAACATCTACCCAA GCCCCAGTTCCTCAAGCTTCGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig91:33680..34901-

>mRNA_P-fluviatile_contig91.15436.1 ID=mRNA_P-fluviatile_contig91.15436.1|Name=mRNA_P-fluviatile_contig91.15436.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1728bp|location=Sequence derived from alignment at P-fluviatile_contig91:33680..34901- (Porterinema fluviatile SAG_2381)
ATGAGCAAGTTCTCCATGACCAATCTTGGAGCAGCCAGCCTTGTACTCGG
AATGGAGATCAAGCAAGGCGACGGCTACATCAAAGTGTCGCAAGGGAACT
ACGTCGAAGCTGTGCTACAGCGCTTCGACTTCCACGACGCCAACCCCGCG
CCGACTCCAGGAACCGGCAAAGCCATTGGCCGGAACCCGAAAGATACCGT
GTTTCTAAGCAAGGACGGTATCAAGCGCTACCAAGAAATAGTCGGCTCAC
TCATGTACTTGGTCAACACGTCAAGGTGGGACATCGGTTTTGCAGTACTC
AATCTCACGAGGGGAATGGCAGCTCCGACGGAGACCCACATGGCAGCGGC
TAAAAGGGTGCTTCGCTACTTGCGTGGAAACCCGGACTTGCCGACCATCT
ACCGCAAAGGATCGCTGGAGCTGACGGGCTTTACGGACAGCGACTTCGCG
GGCGATGAAGAGACCCGCCGCTCTTGCACCGGTTTCCTGTTTATGCTGGG
GGGTGGCGTGATATCTTCGGCGGCAGTACTTCAGAAGACCATCTCCCAAA
GCACTACGGAGGCGGAACTCATCGCGCTGCACAGCGCGTCTCAGGAAGGT
GTGTACCTACTCAACCTGCTGAGAGAACTCGGAGTGGACATCGCCACAGT
CGAAGTCAAACTCCTGAGCGACTCTATGAGTGCGCTCAGCCTGAGCAGCC
AGGCCATGTATTCATCGCGCACGAAACATATCGCGACGAAGTACCATCTG
ATCCGCCAACTGATCGAGAGCGGACGAGTGCGGGTTAACCACGTCCCCAC
CATCCTTCAACTCAGCGACCTGCTGACCAAACATCTACCCAAGCCCCAGT
TCCTCAAGCTTCGAATGAGCAAGTTCTCCATGACCAATCTTGGAGCAGCC
AGCCTTGTACTCGGAATGGAGATCAAGCAAGGCGACGGCTACATCAAAGT
GTCGCAAGGGAACTACGTCGAAGCTGTGCTACAGCGCTTCGACTTCCACG
ACGCCAACCCCGCGCCGACTCCAGGAACCGGCAAAGCCATTGGCCGGAAC
CCGAAAGATACCGTGTTTCTAAGCAAGGACGGTATCAAGCGCTACCAAGA
AATAGTCGGCTCACTCATGTACTTGGTCAACACGTCAAGGTGGGACATCG
GTTTTGCAGTACTCAATCTCACGAGGGGAATGGCAGCTCCGACGGAGACC
CACATGGCAGCGGCTAAAAGGGTGCTTCGCTACTTGCGTGGAAACCCGGA
CTTGCCGACCATCTACCGCAAAGGATCGCTGGAGCTGACGGGCTTTACGG
ACAGCGACTTCGCGGGCGATGAAGAGACCCGCCGCTCTTGCACCGGTTTC
CTGTTTATGCTGGGGGGTGGCGTGATATCTTCGGCGGCAGTACTTCAGAA
GACCATCTCCCAAAGCACTACGGAGGCGGAACTCATCGCGCTGCACAGCG
CGTCTCAGGAAGGTGTGTACCTACTCAACCTGCTGAGAGAACTCGGAGTG
GACATCGCCACAGTCGAAGTCAAACTCCTGAGCGACTCTATGAGTGCGCT
CAGCCTGAGCAGCCAGGCCATGTATTCATCGCGCACGAAACATATCGCGA
CGAAGTACCATCTGATCCGCCAACTGATCGAGAGCGGACGAGTGCGGGTT
AACCACGTCCCCACCATCCTTCAACTCAGCGACCTGCTGACCAAACATCT
ACCCAAGCCCCAGTTCCTCAAGCTTCGA
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