mRNA_P-fluviatile_contig91.15435.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Match: A0A6H5L4A4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A4_9PHAE) HSP 1 Score: 159 bits (403), Expect = 7.050e-41 Identity = 88/232 (37.93%), Postives = 138/232 (59.48%), Query Frame = 1
Query: 43 EIKGLQDLGKFTVLDDLPKGEKAVGSRLVFAYEIDKEGNIIKPKTRLVAKGYMQREGVDFFRTSAPTPAVAWMKVVMVVAKEIGFRMRHLDVAQAFIKAPLDTRVIMKFCGRCGELSGKYVLLHKALYGLKQSGPLCNELLVNKLVKVHGMHGQSPLTP-VFRLIREGKLALILTAHVDDIAVGGLEGEVEKLLEVLKEGFTTNDLGELSLFTGCAFAQDEEGGTVKINQTS 735
EI G G FT + +LP+G KA+GS+ VF+++ +++G I+ K+R++A+G+ Q G+DF + + P+ A +K V+ VA E+G ++ H DV QA+I A L ++F G +SGK V + +ALYGLKQSG L++ + Q + P VFR + +G++ ++ +VDDI V EGE E+L L + F LGE + + GCA A D E G K++QT+
Sbjct: 4 EIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKSRMIARGFSQIPGIDFHHSFSACPSAASIKTVIAVATEMGKKLAHWDVKQAYIHAKLKEETCLRFPEGYGNMSGKVVKVERALYGLKQSGREWGFEAAGALIE--NGYEQCRVDPCVFRKVVDGEVVSLIVIYVDDILVVADEGEREELFASLNKKFPVESLGEYTWYDGCAIAMDVENGITKLSQTA 233
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE) HSP 1 Score: 135 bits (341), Expect = 2.810e-31 Identity = 74/214 (34.58%), Postives = 122/214 (57.01%), Query Frame = 1
Query: 88 DLPKGEKAVGSRLVFAYEIDKEGNIIKPKTRLVAKGYMQREGVDFFRTSAPTPAVAWMKVVMVVAKEIGFRMRHLDVAQAFIKAPLDTRVIMKFCGRCGELSGKYVLLHKALYGLKQSGPLCNELLVNKLVKVHGMHGQSPLTPVFRLIREGKLALILTAHVDDIAVGGLEGEVEKLLEVLKEGFTTNDLGELSLFTGCAFAQDEEGGTVKINQ 729
D +G + ++ V++++ D+ G ++ K RLVA+G+ QREGVDFF T +P P++ ++++ +A + + + H D QAF+++ LD V ++ CG LSGK V L + LYGLKQ+ + L+ + K G + V RLI G + +++ HVDDI GL+ ++ L ++LGEL + GC F++D GTV I+Q
Sbjct: 816 DKARGTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRGLYGLKQASRTWHHHLMRGM-KSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPVSNLGELRWYAGCRFSRDTVLGTVTISQ 1028
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE) HSP 1 Score: 135 bits (341), Expect = 3.260e-31 Identity = 79/240 (32.92%), Postives = 129/240 (53.75%), Query Frame = 1
Query: 10 HRGAWEAAVDAEIKGLQDLGKFTVLDDLPKGEKAVGSRLVFAYEIDKEGNIIKPKTRLVAKGYMQREGVDFFRTSAPTPAVAWMKVVMVVAKEIGFRMRHLDVAQAFIKAPLDTRVIMKFCGRCGELSGKYVLLHKALYGLKQSGPLCNELLVNKLVKVHGMHGQSPLTPVFRLIREGKLALILTAHVDDIAVGGLEGEVEKLLEVLKEGFTTNDLGELSLFTGCAFAQDEEGGTVKINQ 729
H W A E GL +G F + +G + ++ V++++ D+ G ++ K RLVA+G+ QREGVDFF T +P P++ ++++ +A + + H QAF+++ LD V ++ CG SGK V L ++LYGLKQ+ + L+ + K G + V RLI G + +++ HVDDI GL+ ++ L ++LGEL + GC F++D GTV I+Q
Sbjct: 1380 HHHIWTNAERKEFFGLNAVGTF----EEQRGTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDSCHFYAEQAFVQSELDEVVFIRLPPACGARSGKVVRLRRSLYGLKQASRTWHHHLMRGM-KSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQ 1614
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Match: A0A6H5KAM7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM7_9PHAE) HSP 1 Score: 134 bits (338), Expect = 4.200e-31 Identity = 88/245 (35.92%), Postives = 132/245 (53.88%), Query Frame = 1
Query: 4 SRHRGAWEAAVDAEIKGLQDLGKFTVLDDLPKGEKAVGSRLVFAYEIDKEGNIIKPKTRLVAKGYMQREGVDFFRTSAPTPAVAWMKVVMVVAKEIGFRMRHLDVAQAFIKAPLDTRVIMKFCGRCGELSGKYVLLHKALYGLKQSGPLCNELLVNKLVKVHGMHGQSPLTP-VFRLIREGKLALILTAHVDDIAVGGLEGEVEKLLEVLKEGFTTNDLGELSLFTGCAFAQDEEGGTVKINQTS 735
S+++ WEAA+ EI G G FT + +L +G+KA GS+ V +++ + +G I VDF AP+ +K V+ VA E G ++ H DV QA+I A L + ++F G CG +SGK V + ALYGLKQSG + L++ + Q + P VFR + +G++ ++ +VDDI V EG E+L L + DLGE +L+ GCA A D E G K++QT+
Sbjct: 260 SKYKVFWEAAMKKEIDGHDKTGTFTKVKELYEGQKATGSKWVLSWKTNDKGLI-----------------VDF---KAPS-----IKTVIAVASEKGKKLAHWDVKQAYIHAKLKDELYLRFPGGCGSMSGKVVNVESALYGLKQSGREWGFEAADALIE--DGYEQYRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGGREELFASLNKKSPVKDLGECTLYDGCAIAMDVENGITKLSQTA 477
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Match: A0A6H5KBJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ6_9PHAE) HSP 1 Score: 135 bits (340), Expect = 4.260e-31 Identity = 79/240 (32.92%), Postives = 129/240 (53.75%), Query Frame = 1
Query: 10 HRGAWEAAVDAEIKGLQDLGKFTVLDDLPKGEKAVGSRLVFAYEIDKEGNIIKPKTRLVAKGYMQREGVDFFRTSAPTPAVAWMKVVMVVAKEIGFRMRHLDVAQAFIKAPLDTRVIMKFCGRCGELSGKYVLLHKALYGLKQSGPLCNELLVNKLVKVHGMHGQSPLTPVFRLIREGKLALILTAHVDDIAVGGLEGEVEKLLEVLKEGFTTNDLGELSLFTGCAFAQDEEGGTVKINQ 729
H W A E GL +G F +G + ++ V++++ D+ G ++ K RLVA+G+ QREGVDFF T +P P++ ++++ +A + + + D QAF+++ LD V ++ CG LSGK V L ++LYGLKQ+ + L+ + K G + V RLI G + +++ HVDDI GL+ ++ L ++LGEL + C F++D GTV I+Q
Sbjct: 1262 HHHIWTNAERKEFFGLNAVGTFE-----ERGTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCPFDAQQAFVQSELDEIVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGM-KSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYADCRFSRDTVLGTVTISQ 1495
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Match: A0A6H5KIP2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP2_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.670e-30 Identity = 86/242 (35.54%), Postives = 131/242 (54.13%), Query Frame = 1
Query: 4 SRHRGAWEAAVDAEIKGLQDLGKFTVLDDLPKGEKAVGSRLVFAYEIDKEGNIIKPKTRLVAKGYMQREGVDFFRTSAPTPAVAWMKVVMVVAKEIGFRMRHLDVAQAFIKAPLDTRVIMKFCGRCGELSGKYVLLHKALYGLKQSGPLCNELLVNKLVKVHGMHGQSPLTPVFRLIREGKLALILTAHVDDIAVGGLEGEVEKLLEVLKEGFTTNDLGELSLFTGCAFAQDEEGGTVKINQ 729
S HR ++ E GL + G T E A+ + VF ++ D+ G K K+RLVA+G MQRE +DF APT +V+ ++++ +A E+ + H D+ QAF+++ L+ V M+ CG LSG V L K+LYGL+Q+ + +L LV + G VFRLI +G + LIL HVDDI G +KL L + T +L EL ++GC + +++E G + I+Q
Sbjct: 632 SGHRHLRSDSMQREFYGLLEAGTCTPAKQ-QLVENAINDKWVFDWKADEFGWPTKVKSRLVARGDMQREYIDFGELYAPTVSVSCVRMLAALACELNLDLCHFDIEQAFVRSELEEDVYMRSPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVAL-GFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERETCDKLGADLNKSVTVKNLEELRWYSGCFYERNKETGRLTISQ 871
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Match: A0A284S5Y9_ARMOS (Integrase catalytic domain-containing protein n=1 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284S5Y9_ARMOS) HSP 1 Score: 132 bits (333), Expect = 2.800e-30 Identity = 81/240 (33.75%), Postives = 132/240 (55.00%), Query Frame = 1
Query: 22 WEAAVDAEIKGLQDLGKFTVLDDLPKGEKAVGSRLVFAYEIDKEGNIIKPKTRLVAKGYMQREGVDFFRTSAPTPAVAWMKVVMVVAKEIGFRMRHLDVAQAFIKAPLDTRVIMKFCGRCGELSGKYVLLHKALYGLKQSGPLCNELLVNKLVKVHGMHGQSPLTPVFRLIREGKLALILTAHVDDIAVGGLEGEVEKLLEV---LKEGFTTNDLGELSLFTGCAFAQDEEGGTVKINQT 732
W+ A+D EI +Q++G +T L+DL K +A+GS+ VF+ + D+ GN+ K RLVA+GY Q GVDF+ T AP + ++ + +A + +DV A++ L+ + M+ + SG+ LHK LYGLKQSG N ++ + + V++ IR+G++ +I T VDD+ + +E + EV L++ F NDLGE G +D+E GT+ ++QT
Sbjct: 571 WKRAMDEEIHTIQEMGTYT-LEDLLKEREAIGSKWVFSKKYDENGNVSCYKARLVAQGYSQIPGVDFYETFAPVVRLESVRAALGIAAIKNLEISQMDVKGAYLNGELEEEIFMRQPQDYDDRSGRVCRLHKILYGLKQSGHEWNREFNRNMMDIRFSRLEVDHC-VYKRIRDGRMTVI-TVWVDDLLI--FTETIEDMAEVKGELQKLFDVNDLGEPKKIIGIEIERDQENGTIALSQT 805
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE) HSP 1 Score: 131 bits (329), Expect = 5.410e-30 Identity = 74/209 (35.41%), Postives = 119/209 (56.94%), Query Frame = 1
Query: 103 EKAVGSRLVFAYEIDKEGNIIKPKTRLVAKGYMQREGVDFFRTSAPTPAVAWMKVVMVVAKEIGFRMRHLDVAQAFIKAPLDTRVIMKFCGRCGELSGKYVLLHKALYGLKQSGPLCNELLVNKLVKVHGMHGQSPLTPVFRLIREGKLALILTAHVDDIAVGGLEGEVEKLLEVLKEGFTTNDLGELSLFTGCAFAQDEEGGTVKINQ 729
+ + S+L+F +++D G K K RLVA+G MQ+E +DF APT A + ++++ +A E+ + H D+ QAF++APL+ + M+ CG LSGK V L+K+LYGL+Q+ LL L+ + G + +FR + G++ L+L HVDDI G + ++ + L E LGEL ++GC + D E G + I+Q
Sbjct: 148 DNCIKSKLLFDWKVDAFGFPTKAKARLVARGDMQKEYIDFGDLYAPTVASSSVRMLAALACELDLELCHFDIDQAFVRAPLNENIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLAL-GFEQCMADSCLFRFVEGGEVVLLLVVHVDDIFAVGTKERCDQFGKDLGEYVPVKSLGELKWYSGCYYEGDREAGRMTISQ 355
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Match: A0A5N6PWF2_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PWF2_9ASTR) HSP 1 Score: 129 bits (323), Expect = 6.700e-30 Identity = 84/241 (34.85%), Postives = 136/241 (56.43%), Query Frame = 1
Query: 19 AWEAAVDAEIKGLQDLGKFTVLDDLPKGEKAVGSRLVFAYEIDKEGNIIKPKTRLVAKGYMQREGVDFFRTSAPTPAVAWMKVVMVVAKEIGFRMRHLDVAQAFIKAPLDTRVIMKFCGRCGELSGKYVL---LHKALYGLKQSGPLCNELLVNKLVKVHGMHGQSPLTPVFRLIREGKLALILTAHVDDIAV-GGLEGEVEKLLEVLKEGFTTNDLGELSLFTGCAFAQDEEGGTVKINQ 729
+W+AA+ AEI+ + +T++ LP KA+G + V+ + D GNI + K LVAKGY+Q++G+DF AP + +++++ +A + + + HLDV AFI L V + + E+ GK + LHKALYGL+Q+ P L + K +K G H + V++L + G + LI+ +VDD+ V G E + + E +K F +DLG+LS + G QDE G++ +NQ
Sbjct: 63 SWKAAMQAEIEAIHKDKTWTLVQ-LPSNHKAIGLKWVYKLKKDANGNITRHKACLVAKGYVQKKGIDFEEAFAPAARIETIRLILAMAAKDKWVVHHLDVKSAFINGDLQEEVYVTQ-PKGFEVKGKESMVFKLHKALYGLRQA-PRAWNLKLEKSLKDKGFHKCAQEQAVYKLHKTGSI-LIVGVYVDDLIVTGSSERVIYEFKEKMKVVFEMSDLGKLSYYLGIEVCQDE--GSITLNQ 297
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE) HSP 1 Score: 129 bits (325), Expect = 1.460e-29 Identity = 80/240 (33.33%), Postives = 122/240 (50.83%), Query Frame = 1
Query: 10 HRGAWEAAVDAEIKGLQDLGKFTVLDDLPKGEKAVGSRLVFAYEIDKEGNIIKPKTRLVAKGYMQREGVDFFRTSAPTPAVAWMKVVMVVAKEIGFRMRHLDVAQAFIKAPLDTRVIMKFCGRCGELSGKYVLLHKALYGLKQSGPLCNELLVNKLVKVHGMHGQSPLTPVFRLIREGKLALILTAHVDDIAVGGLEGEVEKLLEVLKEGFTTNDLGELSLFTGCAFAQDEEGGTVKINQ 729
H W A E GL +G F E D+ G ++ K RLVA+G+ QREGVDFF T +P P++ ++++ +A + + + H D QAF+++ LD V ++ CG LSGK V L ++LYGLKQ+ + L+ + K G + V RLI G + +++ HVDDI GL+ ++ L ++LGEL + GC F++D GTV I+Q
Sbjct: 96 HHHIWTNAERKEFFGLNAVGTFE--------------------EGDEFGYAVRAKARLVARGFAQREGVDFFETFSPYPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGM-KSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQ 314 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig91.15435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig91.15435.1 >prot_P-fluviatile_contig91.15435.1 ID=prot_P-fluviatile_contig91.15435.1|Name=mRNA_P-fluviatile_contig91.15435.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=78bp MCLVVMTRLDIANAVRAEGRHSLDPTERHSKAVIHIIQYLLGTKDLGLTFback to top mRNA from alignment at P-fluviatile_contig91:31179..32432+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig91.15435.1 ID=mRNA_P-fluviatile_contig91.15435.1|Name=mRNA_P-fluviatile_contig91.15435.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1254bp|location=Sequence derived from alignment at P-fluviatile_contig91:31179..32432+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig91:31179..32432+ >mRNA_P-fluviatile_contig91.15435.1 ID=mRNA_P-fluviatile_contig91.15435.1|Name=mRNA_P-fluviatile_contig91.15435.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=468bp|location=Sequence derived from alignment at P-fluviatile_contig91:31179..32432+ (Porterinema fluviatile SAG_2381)back to top |