mRNA_P-fluviatile_contig91.15434.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig91.15434.1
Unique NamemRNA_P-fluviatile_contig91.15434.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Match: D7FNB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB1_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 9.490e-153
Identity = 269/432 (62.27%), Postives = 299/432 (69.21%), Query Frame = 1
Query:  100 MALLYPLDQVRAILQVDDELARECAAPGGAGVLGALSRIIQRRGRAGLWLGMGPVLITMGLSNFVYFYCFNGMKAALLARRRLLEARGLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSNLRIKAGNGTGGLFPTLLAIGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYEALKQIAGRRHDLRRQFQPHGGAAKALVPPHAP--SXXXXXXXXXXTPGVGLRSHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQDCPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKLLHTVLTSALLFLGYERILEMIATFMAAMGEEKPSSSSSLSISGSR-RATTAAAAPSRLSKPKR 1386
            MALLYPLDQVRAILQVDD+LA+EC+APGGAGVLGALSR+++R GRAGLW GM PVLITMG+SNFVYFYCF GMKAALL+RRR+L ARG+R+                                 +    G  RG  GGGLTPLESVVASTIAGV+NVLATTPLWVSNLRIKAGNG GGLF TL +IGRHEGLAGLWSG APSLVLVSNPIIQFVVYE LKQ  GRRH  R     +G A + +  P  P  +           P VGLRSHEAFLLGATAK  +TLVTYPLQLAQAKLRAGRA  G    +     Q D   P      +RS V WQ+LTCWSGTV++L  + R+NGV GMYQGMRAKLLHTVLTSALLFLGYER+LE+IA  MAA  E  P     L + GS   A TAA   S + KP R
Sbjct:    1 MALLYPLDQVRAILQVDDDLAKECSAPGGAGVLGALSRLVRRHGRAGLWRGMVPVLITMGVSNFVYFYCFTGMKAALLSRRRVLRARGVRAGG------------------------------AAKPLAGGARGEGGGGLTPLESVVASTIAGVINVLATTPLWVSNLRIKAGNGVGGLFSTLGSIGRHEGLAGLWSGTAPSLVLVSNPIIQFVVYETLKQALGRRHSHR-----NGEARRIITQPPDPRSAAGGGSRGGAGRPSVGLRSHEAFLLGATAKTISTLVTYPLQLAQAKLRAGRAARGGGTWQGQCNEQDDSSSPGGARGGFRSGVAWQLLTCWSGTVDVLVSVCRRNGVGGMYQGMRAKLLHTVLTSALLFLGYERLLEVIANSMAATTEAPPPPL--LPVPGSTVAAATAAGLHSSIPKPCR 395          
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Match: A0A6P8I450_ACTTE (peroxisomal membrane protein PMP34-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I450_ACTTE)

HSP 1 Score: 170 bits (431), Expect = 2.040e-44
Identity = 137/426 (32.16%), Postives = 187/426 (43.90%), Query Frame = 1
Query:   52 SPFVHALSGAVGAVAAMALLYPLDQVRAILQVDDELARECAAPGGAGVLGALSRIIQRRGRAGLWLGMGPVLITMGLSNFVYFYCFNGMKAALLARRRLLEARGLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSNLRIK--------------AGNGTGGLFPTLLAIGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYEALKQIAGRRHDLRRQFQPHGGAAKALVPPHAPSXXXXXXXXXXTPGVGLRSHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQDCPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKLLHTVLTSALLFLGYERILEMIATFMAAMG 1287
            S  VHALSGAVG+V AM++ YPLD  R  LQVDD+   +       G +  L  I+Q  G   L+ G+GPVL ++  SNF+YFY FN +KA  L  R    ++                                                        + ++   IAG++NVL TTPLWV+N R+K              A     G+   +  I + EGL  LW+G   S+ L  NP IQF+VYE++K+       LRR      G  K                        L + E FL+GA AKA AT+VTYPLQ+AQ K RAG                    Y    +               S  +++L K+ R+ G+ G+Y+G+ AKLL TVLT+AL+FL YE+I    A F+ A+G
Sbjct:   33 SNLVHALSGAVGSVTAMSVFYPLDTARTRLQVDDKRNSK-------GTIYVLREIVQDEGLMSLYRGLGPVLFSLFCSNFLYFYTFNSLKAIFLRNRHASTSK--------------------------------------------------------QDLLFGYIAGIVNVLVTTPLWVANTRLKLQGVKLRSQNLESIATPKYTGIIDGICRISKEEGLGSLWNGIGSSVFLAGNPAIQFMVYESIKRF------LRRS-----GKTK------------------------LSASEFFLIGAVAKAIATVVTYPLQIAQCKQRAG--------------------YERYKQH--------------SNLLSLLAKLIREQGILGLYKGLEAKLLQTVLTAALMFLAYEKI----AAFIFALG 322          
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Match: UPI0009E615EE (peroxisomal membrane protein PMP34-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E615EE)

HSP 1 Score: 166 bits (420), Expect = 7.420e-43
Identity = 135/416 (32.45%), Postives = 184/416 (44.23%), Query Frame = 1
Query:   58 FVHALSGAVGAVAAMALLYPLDQVRAILQVDDELARECAAPGGAGVLGALSRIIQRRGRAGLWLGMGPVLITMGLSNFVYFYCFNGMKAALLARRRLLEARGLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSNLRIKAGNGT--------------GGLFPTLLAIGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYEALKQIAGRRHDLRRQFQPHGGAAKALVPPHAPSXXXXXXXXXXTPGVGLRSHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQDCPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKLLHTVLTSALLFLGYERILEMI 1263
            FVHAL+GAVG+V AM + YPLD  R  LQVDD+   +  A         L  IIQ  G   L+ G+ PVL ++  SNF+YFY FNG+K A + R                                          KTSS                L+ ++   +AG++NVL TTPLWV N R+K    T               G+   LL I + EGL+ LWSG  PSLVL  NP IQF+VYEA+K+     H+ ++                                  L   + F LGA AKA +T+VTYPLQ+AQ K R+G       +  NG+                            +   ++L ++ R+ GV+G+Y+G+ AKLL TV T+AL+F+ YE+I   I
Sbjct:   35 FVHALAGAVGSVTAMTVFYPLDTARTRLQVDDKRKAKSTAY-------ILMDIIQEEGVHSLYRGLLPVLSSLYCSNFLYFYTFNGLKTAFVGR-----------------------------------------GKTSSS---------------LQDLLFGYLAGIVNVLMTTPLWVVNTRLKLQGATFRTKGLECNKTKKYKGIIDGLLRISQEEGLSTLWSGTGPSLVLAGNPAIQFMVYEAIKKFL--MHEDKK---------------------------------ALSGKQYFALGAIAKAVSTVVTYPLQVAQCKQRSGH------KTPNGK----------------------------ADIFSLLARLTREQGVKGLYKGLEAKLLQTVSTAALMFVAYEKIAAFI 318          
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Match: A0A7S4UHT2_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4UHT2_9EUKA)

HSP 1 Score: 163 bits (413), Expect = 8.210e-42
Identity = 128/406 (31.53%), Postives = 188/406 (46.31%), Query Frame = 1
Query:   58 FVHALSGAVGAVAAMALLYPLDQVRAILQVDDELARECAAPGGAGVLGALSRIIQRRGRAGLWLGMGPVLITMGLSNFVYFYCFNGMKAALLARRRLLEARGLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSNLRIKAGNGTG--------GLFPTLLAIGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYEALKQIAGRRHDLRRQFQPHGGAAKALVPPHAPSXXXXXXXXXXTPGVGLRSHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQDCPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKLLHTVLTSALLFLGYERI 1251
            FVHA SGAVG  +A+ L YPL+  R+ L V D++ R+         L  L  I++  G   L+ G    ++++G SNFVYFY +NG+K AL                                              TS  A    R G+   + P+ ++V ++IAGV+NVL TTPLWV   R+   N           G+   L  I R EG+  LW+G  PS++LVSNP I FVVYE L++   +R +LR                                G  +   E F++GA AK  AT+VT+PLQ+AQ++LR  R               +        + T ++S   +    ++GT+++L K+Y ++G +G ++GM AKL  TVLT+A  F  YE+I
Sbjct:   10 FVHAFSGAVGGTSAITLFYPLNLARSKLMVSDDVKRKST-------LELLLGIVKTDGFRALYQGWWSSVVSLGASNFVYFYMYNGLKIAL----------------------------------------------TSYYA----RQGKSTTIGPIMNLVLASIAGVINVLMTTPLWVVGSRLTVQNKDQNAKKKPYTGILDGLTRIAREEGVGALWNGTGPSIILVSNPTIHFVVYERLREFMLKRVNLR--------------------------------GYEITPIEFFIMGAIAKMVATVVTFPLQIAQSRLRTSRV--------------ESKKKQQAEKETGKASPNSE--PTYTGTIDVLGKLYAKDGFKGWFRGMEAKLWQTVLTAAFQFSVYEQI 310          
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Match: W7TQ30_9STRA (Solute carrier family 25 (Mitochondrial carrier peroxisomal membrane 34kda) member 17 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ30_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.080e-41
Identity = 141/423 (33.33%), Postives = 196/423 (46.34%), Query Frame = 1
Query:   61 VHALSGAVGAVAAMALLYPLDQVRAILQV-----DDE----------LARECAAPGGAGVLGALSR-------IIQRRGRAGLWLGMGPVLITMGLSNFVYFYCFNGMKAALLARRRLLEARGLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSNLRIKAGNGTGGLFPTLLA-IGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYEALKQIAGRRHDLRRQFQPHGGAAKALVPPHAPSXXXXXXXXXXTPGVGLRSHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQDCPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKLLHTVLTSALLFLGYERILEM 1260
            +HAL+G +G+  A+AL YPLDQVR   QV     DDE          L +E         L  L R       ++QR G   L+ GM PVLI+MGLSN V+F+  N +KA +L+R R    + L                                             G  G L         TIAGVLNV+ TTPLWV+ +R K  +  G    T++A I + EG+  LWSG  PSL+LV NP++Q  VY+ LK         RR        +  L  P  PS             V L S EAF  GA  K  AT+V+YPLQ+AQ++LR       +  +++   G          +  W   +  Q    ++GT++ L  ++R+ GV G++QG+ +KLL TV+TSA +FL YE I ++
Sbjct:   91 IHALAGGLGSALALALTYPLDQVRTFQQVNDTPEDDEYINHGGSSPLLNQETCPATSLARLAFLFRPYRTASVMVQRHGAGALYRGMVPVLISMGLSNAVFFFVSNLLKA-ILSRYRQRTGKSL---------------------------------------------GYFGHLA------TGTIAGVLNVVLTTPLWVAGMRAKLSSAQGWNILTIMAKIWKDEGVMALWSGMIPSLLLVCNPVLQHFVYDVLK---------RRTLATRRVRSSQLSFP--PSSMPIGRSEVTGAAVALTSLEAFYFGAVGKFVATIVSYPLQVAQSRLR-------QQSQKSETDGNNATTSKEEGKTDWERELLAQSANHYTGTLDCLLDLWRRKGVAGLFQGVESKLLQTVVTSAFMFLAYENIFKV 443          
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Match: A0A2M4ATT4_9DIPT (Putative mitochondrial carrier protein n=6 Tax=Nyssorhynchus TaxID=44543 RepID=A0A2M4ATT4_9DIPT)

HSP 1 Score: 162 bits (411), Expect = 2.110e-41
Identity = 138/438 (31.51%), Postives = 193/438 (44.06%), Query Frame = 1
Query:   58 FVHALSGAVGAVAAMALLYPLDQVRAILQVDDELARECAAPGGAGVLGALSRIIQRRGRAGLWLGMGPVLITMGLSNFVYFYCFNGMKAALLARRRLLEARGLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSNLRIKA-----------GNGTG---------------------GLFPTLLAIGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYEALKQIAGRRHDLRRQFQPHGGAAKALVPPHAPSXXXXXXXXXXTPGVGLRSHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQDCPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKLLHTVLTSALLFLGYERILEMIATFM 1275
            +VHA+SG+ G+V AM+  YPLD VR+ LQ+++   R+  +         L  +I+  G A L+ G+ PVL ++ +SNFVYFY F+ +KA             LR+A                                      V  GG G G + L  ++  ++AGV+NVL TTP WV N R+K            G GTG                     GL   L  I R EG+ GLW+GA PSL+LV NP IQF+VYEALK+          + +P   +  A+                            F +GA AK  AT++TYPLQL Q KLR G A              +    PA  +                 TV +L  I ++ GV G+Y+G+ AKLL TVLT+AL+F+ YE+I   + + +
Sbjct:   15 WVHAVSGSAGSVIAMSAFYPLDTVRSRLQLEEPDRRKALS-----TWRILMHLIEEEGFATLYRGLVPVLQSLCISNFVYFYTFHSLKA-------------LRAAS-------------------------------------VASGGPGAGQSALGDLLLGSLAGVVNVLTTTPFWVVNTRLKMKGLDQQHGRLLGGGTGSGSSVRNGGHHSISNNSVKYDGLLDGLQYIARTEGVRGLWAGAVPSLLLVINPAIQFMVYEALKRKL-------TEGRPSSSSPSAIT--------------------------FFSIGAIAKMIATVLTYPLQLVQTKLRHGNA-------------DKSLNLPADID-----------------TVQLLLIILKRQGVAGLYRGLEAKLLQTVLTAALMFMAYEKIARFVTSLL 334          
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Match: A0A1Y1MST7_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MST7_PHOPY)

HSP 1 Score: 160 bits (406), Expect = 2.160e-41
Identity = 126/407 (30.96%), Postives = 178/407 (43.73%), Query Frame = 1
Query:   61 VHALSGAVGAVAAMALLYPLDQVRAILQVDDELARECAAPGGAGVLGALSRIIQRRGRAGLWLGMGPVLITMGLSNFVYFYCFNGMKAALLARRRLLEARGLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSNLRIKAGNGTG--GLFPTLLAIGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYEALKQIAGRRHDLRRQFQPHGGAAKALVPPHAPSXXXXXXXXXXTPGVGLRSHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQDCPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKLLHTVLTSALLFLGYERILEMIATFM 1275
            VHA++G+VG+V AM   YPLD VR   Q++D  + +C+         AL R++Q  G AGL+ G+ PVLI++G SNFVYFY F+G+K+ L +  +                                                               +V   +AGV NVL TTPLWV N R+K        GL   L+ I R EG+  LWSG  PSL+LV NP +QF VYEALK          R+  P   A                                F++GATAKA +T++TYPLQLAQ             R+R G+ G+ +                          + +L  I ++ G +G++QG+ AKL  TVLT+AL+F+ YE++   +   +
Sbjct:   12 VHAIAGSVGSVVAMTTFYPLDTVRFRKQIEDTNSDDCST------YTALRRLLQTEGLAGLYAGIKPVLISLGTSNFVYFYTFHGLKSMLNSSVK-------------------------------------------------------------NDLVLGLLAGVTNVLLTTPLWVVNSRLKVNKKVPYTGLLEGLVHISRTEGVQALWSGVYPSLMLVINPALQFAVYEALK----------RRVSPKTAAT------------------------------VFMIGATAKAVSTVITYPLQLAQ------------TRQRYGKEGKMNM-------------------------LALLLAIAKKGGPQGLFQGLEAKLWQTVLTAALMFVAYEKVFRFVVMLL 274          
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Match: UPI0013045C42 (peroxisomal membrane protein PMP34 isoform X1 n=2 Tax=Nomia melanderi TaxID=2448451 RepID=UPI0013045C42)

HSP 1 Score: 161 bits (408), Expect = 2.220e-41
Identity = 139/406 (34.24%), Postives = 183/406 (45.07%), Query Frame = 1
Query:   61 VHALSGAVGAVAAMALLYPLDQVRAILQVDDELARECAAPGGAGVLGALSRIIQRRGRAGLWLGMGPVLITMGLSNFVYFYCFNGMKAALLARRRLLEARGLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSNLRIKA-GNGTGG--------LFPTLLAIGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYEALKQIAGRRHDLRRQFQPHGGAAKALVPPHAPSXXXXXXXXXXTPGVGLRSHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQDCPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKLLHTVLTSALLFLGYERI 1251
            VHA+SGA G+V AMA  +PLD VR+ LQ+++   RE         L  +  ++ + G   L+ GM PVL ++  SNFVYFY F+G+K           ARG ++A                                                     ++ ++IAGV+NVL TTPLWV N R+K  G G G         L+  LL I R+EGLA LW+G  PSL+LV NP IQF+ YE++K         RR  +   GA     PP A                       F +GA AK  AT +TYPLQL Q KLR G                    YP +                 +GT+ IL  I ++ G+ GMY+GM AKLL TVLT+AL+FL YE+I
Sbjct:   17 VHAISGAAGSVVAMATFFPLDTVRSRLQMEE--GRE-----PKNTLAMIRELVMKEGPCTLYRGMVPVLQSLCASNFVYFYTFHGLKK--------FRARGNQTAG--------------------------------------------------NDLLVASIAGVINVLTTTPLWVVNTRLKMKGVGQGERNNNEYSTLYDGLLHIWRYEGLANLWAGTLPSLMLVMNPAIQFMTYESIK---------RRITRSLNGA-----PPPA--------------------WMFFAIGAIAKTVATALTYPLQLVQTKLRQGHK------------------YPNLPAD--------------AGTLRILLYILKKQGMAGMYKGMEAKLLQTVLTAALMFLAYEKI 291          
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Match: A0A8B6EPL6_MYTGA (Solute carrier family 25 (Peroxisomal adenine nucleotide transporter), member 17 n=3 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6EPL6_MYTGA)

HSP 1 Score: 160 bits (406), Expect = 6.230e-41
Identity = 132/415 (31.81%), Postives = 181/415 (43.61%), Query Frame = 1
Query:   61 VHALSGAVGAVAAMALLYPLDQVRAILQVDDELARECAAPGGAGVLGALSRIIQRRGRAGLWLGMGPVLITMGLSNFVYFYCFNGMKAALLARRRLLEARGLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSNLRIKAGNGT--------------GGLFPTLLAIGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYEALKQIAGRRHDLRRQFQPHGGAAKALVPPHAPSXXXXXXXXXXTPGVGLRSHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQDCPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKLLHTVLTSALLFLGYERILEMI 1263
            VHA++GA G+V AM + YPLD  R  LQVDD+   + +          ++ I +  G   L+ G+ PVL+T+  SNFVYFY +NG+K   L+    ++                                                       TP++ +  + +AGV+NVL TTPLWV N R+K                    GL   LL + RHEG+A LW+G  PS+VL SNP +QF+VYEA+K          R FQ       +L+                     L     F++GA AK  AT+VTYPLQ+ Q++LRAGR +  E         QQ                         G    L  I + NGV  +Y+GM AKL+ TVLT+AL+FL YE+I   I
Sbjct:   29 VHAVAGAAGSVFAMFVFYPLDTARTRLQVDDKRKAKHSPL-------VMAEIAKEEGLLSLYRGLFPVLVTLCCSNFVYFYTYNGLKTTYLSD---IDKE-----------------------------------------------------TPIKDLTFAFVAGVINVLVTTPLWVVNTRLKLQGANFHTDGHKEAKVPRYRGLIDALLKVARHEGIAALWNGTLPSVVLASNPSVQFMVYEAVK----------RYFQ-------SLLKTKE-----------------LSGFLYFIIGAIAKTVATVVTYPLQVVQSRLRAGRHKKSE---------QQ-------------------------GIFQNLVDIVKDNGVSALYKGMEAKLIQTVLTAALMFLTYEKIAAFI 312          
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Match: UPI0008523221 (peroxisomal membrane protein PMP34 n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=UPI0008523221)

HSP 1 Score: 160 bits (404), Expect = 8.170e-41
Identity = 135/413 (32.69%), Postives = 185/413 (44.79%), Query Frame = 1
Query:   61 VHALSGAVGAVAAMALLYPLDQVRAILQVDDELARECAAPGGAGVLGALSRIIQRRGRAGLWLGMGPVLITMGLSNFVYFYCFNGMKAALLARRRLLEARGLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSNLRIKAGNGTG-----------GLFPTLLAIGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYEALKQIAGRRHDLRRQFQPHGGAAK-ALVPPHAPSXXXXXXXXXXTPGVGLRSHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQDCPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKLLHTVLTSALLFLGYERILEMI 1263
            VHA+SGAVG+V AMA  YPLD VR+ LQ+++ L  +         L  +  +I + G   L+ G+ PVL ++  SNFVYFY F+G+K          E R  R+                                                 T    ++ ++IAGV+NVL TTPLWV N R+K   G G            L+  LL I ++EGL  LW+G  PSL+LV+NP IQF+ YE++K         RR     G A   ALV                           F++GA AKA AT++TYPLQL Q KLR G                    YP +                 +GT+ IL  I ++ G+ G+++GM AKLL T+LT+AL+FL YE+I   +
Sbjct:   17 VHAISGAVGSVVAMAAFYPLDTVRSRLQLEERLQSK-------NTLATIRELIAKEGPYTLYRGIIPVLQSLCASNFVYFYTFHGLK----------ELRSKRNQ------------------------------------------------TAGNDLLLASIAGVINVLTTTPLWVVNTRLKM-RGVGVTLEKNNNKYTTLYDGLLHIWKYEGLKQLWAGTLPSLMLVANPAIQFMTYESIK---------RRVITSTGTAQPPALV--------------------------FFIIGAIAKAVATVITYPLQLVQTKLRHG------------------YKYPNLPPD--------------AGTLQILFYILKKEGISGLFKGMEAKLLQTILTAALMFLAYEKIARFV 296          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig91.15434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNB1_ECTSI9.490e-15362.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6P8I450_ACTTE2.040e-4432.16peroxisomal membrane protein PMP34-like n=1 Tax=Ac... [more]
UPI0009E615EE7.420e-4332.45peroxisomal membrane protein PMP34-like n=1 Tax=Or... [more]
A0A7S4UHT2_9EUKA8.210e-4231.53Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
W7TQ30_9STRA1.080e-4133.33Solute carrier family 25 (Mitochondrial carrier pe... [more]
A0A2M4ATT4_9DIPT2.110e-4131.51Putative mitochondrial carrier protein n=6 Tax=Nys... [more]
A0A1Y1MST7_PHOPY2.160e-4130.96Uncharacterized protein n=1 Tax=Photinus pyralis T... [more]
UPI0013045C422.220e-4134.24peroxisomal membrane protein PMP34 isoform X1 n=2 ... [more]
A0A8B6EPL6_MYTGA6.230e-4131.81Solute carrier family 25 (Peroxisomal adenine nucl... [more]
UPI00085232218.170e-4132.69peroxisomal membrane protein PMP34 n=1 Tax=Cyphomy... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig91contigP-fluviatile_contig91:14490..21418 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score458.4
Seed ortholog evalue4.1e-126
Seed eggNOG ortholog2880.D7FNB1
KEGG koko:K13354
KEGG TC2.A.29.20.1
KEGG Pathwayko04146,map04146
EggNOG free text desc.Belongs to the allantoicase family
EggNOG OGsCOG4266@1,KOG0769@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMitochondrial substrate/solute carrier
Ec32 orthologEc-24_000080.1
Exons8
Model size1795
Cds size1407
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817356.6323748-CDS-P-fluviatile_contig91:14489..146331622817356.6323748-CDS-P-fluviatile_contig91:14489..14633Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 14490..14633 +
1693572208.0865622-CDS-P-fluviatile_contig91:14489..146331693572208.0865622-CDS-P-fluviatile_contig91:14489..14633Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 14490..14633 +
1622817356.6494017-CDS-P-fluviatile_contig91:15920..160971622817356.6494017-CDS-P-fluviatile_contig91:15920..16097Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 15921..16097 +
1693572208.0985608-CDS-P-fluviatile_contig91:15920..160971693572208.0985608-CDS-P-fluviatile_contig91:15920..16097Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 15921..16097 +
1622817356.6644063-CDS-P-fluviatile_contig91:16615..169561622817356.6644063-CDS-P-fluviatile_contig91:16615..16956Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 16616..16956 +
1693572208.1081796-CDS-P-fluviatile_contig91:16615..169561693572208.1081796-CDS-P-fluviatile_contig91:16615..16956Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 16616..16956 +
1622817356.6762621-CDS-P-fluviatile_contig91:17912..180611622817356.6762621-CDS-P-fluviatile_contig91:17912..18061Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 17913..18061 +
1693572208.1270378-CDS-P-fluviatile_contig91:17912..180611693572208.1270378-CDS-P-fluviatile_contig91:17912..18061Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 17913..18061 +
1622817356.6915615-CDS-P-fluviatile_contig91:18406..186241622817356.6915615-CDS-P-fluviatile_contig91:18406..18624Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 18407..18624 +
1693572208.1352665-CDS-P-fluviatile_contig91:18406..186241693572208.1352665-CDS-P-fluviatile_contig91:18406..18624Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 18407..18624 +
1622817356.705439-CDS-P-fluviatile_contig91:19483..195941622817356.705439-CDS-P-fluviatile_contig91:19483..19594Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 19484..19594 +
1693572208.1433141-CDS-P-fluviatile_contig91:19483..195941693572208.1433141-CDS-P-fluviatile_contig91:19483..19594Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 19484..19594 +
1622817356.716641-CDS-P-fluviatile_contig91:20397..205141622817356.716641-CDS-P-fluviatile_contig91:20397..20514Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 20398..20514 +
1693572208.1591458-CDS-P-fluviatile_contig91:20397..205141693572208.1591458-CDS-P-fluviatile_contig91:20397..20514Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 20398..20514 +
1622817356.728427-CDS-P-fluviatile_contig91:20880..210301622817356.728427-CDS-P-fluviatile_contig91:20880..21030Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 20881..21030 +
1693572208.1725745-CDS-P-fluviatile_contig91:20880..210301693572208.1725745-CDS-P-fluviatile_contig91:20880..21030Porterinema fluviatile SAG_2381CDSP-fluviatile_contig91 20881..21030 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817356.738723-UTR-P-fluviatile_contig91:21030..214181622817356.738723-UTR-P-fluviatile_contig91:21030..21418Porterinema fluviatile SAG_2381UTRP-fluviatile_contig91 21031..21418 +
1693572208.1808178-UTR-P-fluviatile_contig91:21030..214181693572208.1808178-UTR-P-fluviatile_contig91:21030..21418Porterinema fluviatile SAG_2381UTRP-fluviatile_contig91 21031..21418 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig91.15434.1prot_P-fluviatile_contig91.15434.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig91 14490..21030 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig91.15434.1

>prot_P-fluviatile_contig91.15434.1 ID=prot_P-fluviatile_contig91.15434.1|Name=mRNA_P-fluviatile_contig91.15434.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=469bp
MGRSSPPVGGAATSLPPSPFVHALSGAVGAVAAMALLYPLDQVRAILQVD
DELARECAAPGGAGVLGALSRIIQRRGRAGLWLGMGPVLITMGLSNFVYF
YCFNGMKAALLARRRLLEARGLRSAAAAAAKDTAAAARASSARVVSSALL
ETAAAKTSSGAPGVHRGGQGGGLTPLESVVASTIAGVLNVLATTPLWVSN
LRIKAGNGTGGLFPTLLAIGRHEGLAGLWSGAAPSLVLVSNPIIQFVVYE
ALKQIAGRRHDLRRQFQPHGGAAKALVPPHAPSSAVGGGGGGGTPGVGLR
SHEAFLLGATAKAAATLVTYPLQLAQAKLRAGRARGGEVRRRNGRGGQQD
CPYPAVTERTWRSSVGWQVLTCWSGTVNILTKIYRQNGVRGMYQGMRAKL
LHTVLTSALLFLGYERILEMIATFMAAMGEEKPSSSSSLSISGSRRATTA
AAAPSRLSKPKRLSAAVS*
back to top

mRNA from alignment at P-fluviatile_contig91:14490..21418+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig91.15434.1 ID=mRNA_P-fluviatile_contig91.15434.1|Name=mRNA_P-fluviatile_contig91.15434.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6929bp|location=Sequence derived from alignment at P-fluviatile_contig91:14490..21418+ (Porterinema fluviatile SAG_2381)
ATGGGGAGATCATCGCCGCCAGTGGGGGGCGCGGCAACCTCACTCCCACC TTCACCCTTTGTCCATGCTTTGTCTGGAGCTGTGGGAGCCGTTGCAGCCA TGGCCTTACTGTACCCCCTCGATCAAGTACGGGCAATCCTCCAAGTACGC ACACCGTGTTGCGGCGTTGGGGATTGAGGAAGGTGTTGTTTAGGCCTTAG ATGCGAGCAGGATGAGCGTTGCGCTAAATATGATGAACAGGAGACATCTC TGTTGATACTGCGCGTTGCCGCTGAGCGTCATGTCATTGAAACCATGTAC TCCATGTACTGCAGAGCACTCGCGCCAGATGCATGACAGAACTCCGTCAA CTTCCCCCCCGCATGCTACCGCATGAGATCGCGCACAATGCAGACTCGCC TTCTTTCCTGAGTTTAACAACATAGCGTTTAGTTCTCCACATTTATCGAA AAGCTTTTTCCTCCTGCCATTTTTGGGTCAAATTTCCCTCAGCGCCTGTT TCCCTTCCATGAGGGACCAAGAAGGCAGTTAAAACAGTTTGTCATCGTTG TGCTGTGTGCACGGCGAACCGCGCCGAACTCCGTGACGACGGAAATCGAC CCCTTAAGATCGATAGAAAAGAGAAAAGTCACGGCAAGTCCATGGGCGCT ACCGGTATCACGTTCGTGAACACAAACACCAGACGAAGGCACACTGTTTT TTGGCAATCAAACATCATCGAGAAGGAATGAGACCATGAGAAGTGTCTCG CCTCGGCCCGGTTCTCTCCTGTACCCACACAGGAACGTGCACGGTAAGCA CCCTTACAGGTGCGCTTGTGCTAGCTGCGGACAGCGCAATCCCTTGCCTC TTGTGTACGGCAAATCTTCTTCGACAGGTTACTCACGTGCGCTTGAGCCA GCAGGTGATAACGCAAATCGCCGCGGATCATAAAGCACGTATGGCGTGTA ATAGCAAACCTCCGCACGCTCGAGACGTTCATCGCGCAGCCGAAAGAGTG CCAGCCCTGCGATCTTCGCTCTGCCCCTGTTATGACATAGTCCCTATCCC GACAACAGCATGGAATCCTTTGCAAAAAGTTCCCAGGGCCATGCATTTGC CAGGGCTTTACTTTCGTCCGGGTTGAGGGCAAGCGTCAAAGCGTAGTGTG CGGCAGTACCCATACTTCCTCCGATATACTACGTAGGAATGGTTAACAGC AGGCGCGTACCATCCGCATACTTCGTGGGCAGACTCAAGACTGAATCGAG TTGATAATGTTATGTGCCGCTATTGAAGGCGACCCATGCGTGACGGGGAA CCGGTTCGGAGCGCGCCAGTATGTTCCAGAGCAACGATCGTGAATTGTAC ATAAGTTCAATCCGTCGGCCAAACCATGTTTGTGCCCCCCCGTCCTCCAC ACAAACCCACGCGATTCAAATGATTGTCCAGGTCGACGACGAATTAGCTA GGGAATGCGCCGCTCCGGGTGGCGCAGGGGTTCTAGGGGCGCTATCACGG ATCATCCAGAGGCGCGGGAGGGCGGGATTGTGGTTAGGGATGGGTCCAGT TTTGATAACCATGGGCCTCTCCAACTTTGTGTACTTCTATTGCTTCAACG GCATGAAGGTACCTTATGCACGGTTCGGTGCGAGCGTCCGCGTTTTTGTG AGTTTGCCATCGATTCGCATGGTCAGCGTAGGGGACCGGGCTTGCTTGAG ATTTTGCAAGGGCTGCTTTCGTGTTATCGCTCCATCTTGGCGGTGTGCGC CTGTGTGATTTCTCCTCACAGCTGTCTGCTGTCGCTGGTGCTGGGGGCGC CAAATTTTGTGCAGCAGGAAGGGAGTCAATATGCCGCTTTGTTAACCGAT CACGATTGATGTTCCTCCACACAGATACTTCACACAGATACACACCACCG CAGCGACTCGAACGTGCTTGCGATCCGCCTCTCCATCCCGTCCCATCCCG TCTCATCCCGTCTCATCGCGTCGTGTCCCGTTCTGTCCTGTCCTGTCCTG TTCTGTCCCGGCCCGCCCTGTCCCGTCGTGTTCCCATCTGCGAACGTGCT TGCAACCCGCTTCGCCCGCCCCGTCTTCTCCCCGACGGCGAACGGGCGAT ATCCATGTCGGAAAATCCCCGCTCAGGCAGCCTTGCTCGCCCGACGGCGT CTCTTAGAAGCACGAGGCTTGAGATCGGCAGCAGCGGCGGCGGCCAAGGA TACCGCTGCTGCGGCACGGGCAAGTAGCGCCCGCGTTGTCTCGAGCGCAT TGCTCGAGACTGCAGCCGCGAAGACCTCGAGCGGAGCGCCAGGGGTGCAC CGTGGGGGGCAAGGGGGAGGGCTGACCCCGCTCGAGAGTGTGGTCGCGTC CACGATAGCTGGAGTCCTGAACGTGTTGGCAACGACGCCGCTTTGGGTTT CTAACCTTCGGATCAAGGCAGGGAACGGCACGGGAGGTTTGTTTCCCACG CTCCTCGCCATTGGACGGTGAGAGGCAATTCGAGAGAAGGGAGGGCTCGT TTATGGCCGCTCGGGTTCTCGTGCGTTTTTCATTGGGTGTCCGCGTGATC GATCTCGAAGGTTATTCTGTGGCTTCGATATGTGGGACTCGCTGGCATTC GGCAGGGTTCTTGAATACACATTCGTGATGGAAAGTGCTTGTTGACTGTC GGTACTGAGCAATTACCTGTCAGAGTCACAAATTGTCAATAGTACGACAG AGGCACCAACTGTAGAGCTTCGATCACGCGGCGAGCAGTGACGACGCGCG TCCAAGGAAATTCCGACAGCATCACGTCCACAAGTGATGGACACCCGTGC GCAGACCCTGCCCGCTGCTATATGCCAAGAAGATAAGTGAGTTTTCTGCT TTGAACAACGAAGTGTGCCGCCTTTGGCACGTCTGAGCGAAATTCCGTTT CTCTTCACGTTTTCACCGCGCATCCTTCGTCGCTGTTCCCCTTTTTTGCG CATGATTTGTCTTCACAGTTGAGCTTTTCCTGCCCCTTTCCCGTGAAATT CAACTAACGGGGCATCGGGGAATATGGCATGCATGTATGCCGGGAACATG TCGCCTTGAAGGGGTGGGAGGACACCCTGTCAAATGGTTTCATCATGCAC AGCACCGGACGTCGTCACCCTGCCAAAAAGCAACATGGTTGACACGAAAT GTCCTCTCCGCTGAACGCTCGTTCAGCCACGAGGGCCTGGCACTATATTT TGCCTTGGTCGCCCCGCCAACCACGTAACACGTGGATTGCAAAAACCCCT TCCGTCGAACGTTCCTGCTAGCTTCGCCGGGTTATGGTCCGGGGCGGCTC TCTCGTTCGTTCTCATCTCCAACCCCATCATGCAGTTCGTCGTGACCAAA CTGGGTATAGTTGTTTTTGTCAACAAACGTCATCGTCAAACGAGATGTCC TTTTCATCGAACGTTCCTTCCAGCCACGAGGGCCTCGCCGGGCTTTGGTC TGGAGCGGCTCCGTCGCTCGTCCTTGTCTCCAACCCCATCATACAATTTG TTGTGTACGAGGCACTCAAGCAGATCGCCGGACGGCGGCACGATCTGCGG CGACAGTTCCAACCACACGGAGGTATTATTTATTAATGTTTGAGCCGGCA TAAGATTGGGACTTTAGCTACAAAGCACGCAACAGCGACCGTTCCTCGAT GATTGTCGATCTGGAGGCCGTATGCATATTCGCGTGTGAGATTTTCGAAT CGTCGTGTCGGATGGCAAATTGGGTCGTGTCACGACACTTTTTCAACTAA ACCCAGGTCCCCTGACACCATCACGCGCTCCCTCGGGGGCAGAAGGGGCG GCGGCGGCGGCGGCGGAGGTAGGCCGAGCGTAAGTTTGCCTTCCCATAAG GCTTTGATATTCACTTGGTTTGTGTTTTCGTTTTTGAAACACGCACGCAA AAAATGAAAACACCCAGGTGCTGCGAAGGCGCTAGTACCTCCACACGCTC CTTCGAGCGCGGTCGGCGGCGGCGGTGGCGGAGGCACGCCGGGCGTGGGT TTGCGGAGCCACGAGGCATTTTTATTGGGGGCCACGGCCAAGGCGGCAGC GACATTGGTAACCTACCCGTTGCAGCTGGCACAGGCGAAACTGCGAGCAG GTCGTGCGCGGGGCGGAGAGGTGAGGCGGCGCAATGTGACACGAGCGTTA CGGAGGCATCGACCCTCGTAAAAGTTCCTTTGAGGAGAAGCACCGCCTGC GATTTTATTTCCTGTACATGGTACAGCAAGTGAGAGAGACAGGGATGCTG TCGTCACCCGAAGGTGGTCAAGTCGCTGTGTCAATTTCACGCGAAGCGTA GCAGCTCTGCTTCTCTCGGTTTTTCAGTTAGGGGCTGTGCTCTGGACGTA ATTGCAACACATAATACGGAGGTACATAGTTGTCTGGGCCAAATCGGAAA TACGGGGCTGGTTATCACTCAGCAGTATGATCTTCAGCAGAGCATGCCAT AGTGCAAGCTGATGGTAAGTTCTTCAAAATTGGAATGCAGAAGACGAAAA AACAAACTGTGCTTGCTACAAGAACGTTCCACCCCAAACCGCTCGTTCTA TTTGCTCGAATTCGGTCTTGAATACTCTGTACCACCTTAATAGTTCTTGT TGTTCACCGGCCCGTCGTGAGAAAGGTTCCGGGTGAGGAGCGATCCCCCT TAAGAATCGCTTTCTAATTTGTGCGAGAAACACGTGCACAAGATCCCATG GGATACAGCGAAGGCCCTGTGAGTGTTACGTGCAACCCTAATTTTGTAAT GCCAACCTCGCACCAGTTCTTCCACCGAGAGCAAACCAGAATGAGGGAGT TCGATGAGAAAAAGCTAGTCTAACGCTCCACCGCGGAAAATTGCCTGTGC GAACCGGTGTCGCGGTCACGTGGGCAAGCCATGTAGGTGCAGTGCAAAGT GCGGTAAAAAAAAACGAGTACTCTTCCTTGCTTTTTGTATCTTCTTCATC TGCCATGTCATGTTTTGTGTCATGTCATGTCATGTCGTTGGCAGGGTCGC GGTGGCCAGCAAGACTGTCCATACCCCGCAGTCACCGAGCGCACCTGGCG CTCGAGCGTGGGCTGGCAGGTTCTTACCTGCTGGTCAGGGACCGTGAATA TCCTCGTGAGTTCGCTCGGCATTTATTTCTGTACCGGCCAAGAGGGTCCA TTTTTTCTACTTTTGAGGGGGAAACGCGCGTTGCTTTCCAGACGTGTGGA GGGAGGAGGGGGGATATTCCTCGCGTTGCAGAGCGTGCACGCTCTCAAGC AGACGTGGGGTACAATTTGCTGTTGTAACAGAGATGTTCCCTCGTTAATT CGAAATGCGTCCTTTTTTCGTCGAGATGCAGGTGGTAATGGGACAGAGAT ACATAAGGAAGATGTAAATGGGAGATACATTGTAGGATATGCAATTATTG GAGATGCGTTATGGGAGAGGCATTGTGGGAGATGCACTATGGGAGATGCA TTTTTGGACGGCACAGGAATGTTAGTGTATCAAGAAGTTCTTGCTCCTGC ACAACTTGATTGCTGCGCTTCCACCGTTGTGGCTTCTCCGTTATGATTCC GCTCTCCTGGGGACTGTCGTGTACCCTTTCCCCTCTTCCCTGTGGCGATG TACCCACGCGGTCTGATTAAGAGTTCACCGTCCGTACCATTCTCTCCGTC ACAAGGTTTCCCCTCTGGCAGAGTAAGGTTTATCGACAACCTGTCCCCCT TCCCTGAGTTTCAGTTTCGTCAGACCGAGGTACACCCACACGACGGAGTA AGCGGCATCTACGAGGACATGCGATCTTGTTGCCGCGTCATTGTTCTCCT CTTCTCTCCGAGGCGAAGTACCCCACGTCAACAATATCCGCGCATCATTT GCCCTGAAATTGGCCCCTGCGCCACTTTCTCCCCCGCACGCTGTTGCCCC GTTGGAAGACCAAGATATATCGACAGAACGGGGTACGTGGCATGTACCAG GGCATGCGCGCGAAGCTCCTCCATACGGTCCTCACCAGCGCGCTGCTGTT CCTGGGATACGAGCGAATACTCGAGGTGAAATGTTTCAGATCAAGATATT CATCTCTCGTTGGAACACGTGTGATGGTACAGACTTGACGGTTGAGTTGT GTACGAATGGAAATGTTCCGTGCGGTCGGGCTTCGCCCTTCCTCCGTAAG GAGAACTCGCCTTCCTTCAAGCGGAAGAGTTGTGATGGTCGCGAAGGTTT ATTGTTCCGAAAGTTGGGCGGAATCTACTGCCGGCGGCTCTCGCCTCTCT GTCCATTTTAGGTTACGCGACTTAGCCGCGTTGGGTCGTCGATGAGGTCA TTTGTCGAGCCTATCATACTTTTGCTCAACAGCAAGAGTCTCAAGCTACA CTGCCGATGTTTTTTAATTCGGTGTTCGCGGAATCGGGCAGATGATCGCG ACCTTCATGGCGGCAATGGGTGAGGAGAAGCCGTCGTCATCGTCATCGCT GTCCATCTCCGGCTCTCGCAGGGCTACCACTGCAGCTGCTGCTCCCTCCC GCCTCTCGAAACCGAAACGCCTCTCGGCGGCGGTGTCATAGGAATGCCCC TTTGGCACGATGAGTCTGACGGTGACGCTGAATGGAAATTTTGCCCTCGT TCTGCCGACGTTTATCGCGCATTTCTGTCAGCAATTATTTTGCATATATC AGCAACTCATCGGTGTTTACTTGAACCTGGTCCCGAAGTTGCGAAGCGGG AAGTAATCCGAGGTAGAGGCAGAGCTATCGGCCCTTGGCACGGCCGCACT CAGCGCGTTGGTTGATTCAGAGTTTCTGCTGGTGTCGCGCGTACAGGCGT GAGTGGGTACCTCCGTCGTGTCGCCCGCCAGAGCTGTACTTGGTCGACGT TTTCGGACAAAATTAGCGCAAAATTTGGATTAAATTAGGTCGTCCTCGAG CGATGATACCGTGATCAGCGAAATGCAAC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig91:14490..21418+

>mRNA_P-fluviatile_contig91.15434.1 ID=mRNA_P-fluviatile_contig91.15434.1|Name=mRNA_P-fluviatile_contig91.15434.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2814bp|location=Sequence derived from alignment at P-fluviatile_contig91:14490..21418+ (Porterinema fluviatile SAG_2381)
ATGGGGAGATCATCGCCGCCAGTGGGGGGCGCGGCAACCTCACTCCCACC
TTCACCCTTTGTCCATGCTTTGTCTGGAGCTGTGGGAGCCGTTGCAGCCA
TGGCCTTACTGTACCCCCTCGATCAAGTACGGGCAATCCTCCAAATGGGG
AGATCATCGCCGCCAGTGGGGGGCGCGGCAACCTCACTCCCACCTTCACC
CTTTGTCCATGCTTTGTCTGGAGCTGTGGGAGCCGTTGCAGCCATGGCCT
TACTGTACCCCCTCGATCAAGTACGGGCAATCCTCCAAGTCGACGACGAA
TTAGCTAGGGAATGCGCCGCTCCGGGTGGCGCAGGGGTTCTAGGGGCGCT
ATCACGGATCATCCAGAGGCGCGGGAGGGCGGGATTGTGGTTAGGGATGG
GTCCAGTTTTGATAACCATGGGCCTCTCCAACTTTGTGTACTTCTATTGC
TTCAACGGCATGAAGGTCGACGACGAATTAGCTAGGGAATGCGCCGCTCC
GGGTGGCGCAGGGGTTCTAGGGGCGCTATCACGGATCATCCAGAGGCGCG
GGAGGGCGGGATTGTGGTTAGGGATGGGTCCAGTTTTGATAACCATGGGC
CTCTCCAACTTTGTGTACTTCTATTGCTTCAACGGCATGAAGGCAGCCTT
GCTCGCCCGACGGCGTCTCTTAGAAGCACGAGGCTTGAGATCGGCAGCAG
CGGCGGCGGCCAAGGATACCGCTGCTGCGGCACGGGCAAGTAGCGCCCGC
GTTGTCTCGAGCGCATTGCTCGAGACTGCAGCCGCGAAGACCTCGAGCGG
AGCGCCAGGGGTGCACCGTGGGGGGCAAGGGGGAGGGCTGACCCCGCTCG
AGAGTGTGGTCGCGTCCACGATAGCTGGAGTCCTGAACGTGTTGGCAACG
ACGCCGCTTTGGGTTTCTAACCTTCGGATCAAGGCAGGGAACGGCACGGG
AGGTTTGTTTCCCACGCTCCTCGCCATTGGACGGCAGCCTTGCTCGCCCG
ACGGCGTCTCTTAGAAGCACGAGGCTTGAGATCGGCAGCAGCGGCGGCGG
CCAAGGATACCGCTGCTGCGGCACGGGCAAGTAGCGCCCGCGTTGTCTCG
AGCGCATTGCTCGAGACTGCAGCCGCGAAGACCTCGAGCGGAGCGCCAGG
GGTGCACCGTGGGGGGCAAGGGGGAGGGCTGACCCCGCTCGAGAGTGTGG
TCGCGTCCACGATAGCTGGAGTCCTGAACGTGTTGGCAACGACGCCGCTT
TGGGTTTCTAACCTTCGGATCAAGGCAGGGAACGGCACGGGAGGTTTGTT
TCCCACGCTCCTCGCCATTGGACGCCACGAGGGCCTCGCCGGGCTTTGGT
CTGGAGCGGCTCCGTCGCTCGTCCTTGTCTCCAACCCCATCATACAATTT
GTTGTGTACGAGGCACTCAAGCAGATCGCCGGACGGCGGCACGATCTGCG
GCGACAGTTCCAACCACACGGAGCCACGAGGGCCTCGCCGGGCTTTGGTC
TGGAGCGGCTCCGTCGCTCGTCCTTGTCTCCAACCCCATCATACAATTTG
TTGTGTACGAGGCACTCAAGCAGATCGCCGGACGGCGGCACGATCTGCGG
CGACAGTTCCAACCACACGGAGGTGCTGCGAAGGCGCTAGTACCTCCACA
CGCTCCTTCGAGCGCGGTCGGCGGCGGCGGTGGCGGAGGCACGCCGGGCG
TGGGTTTGCGGAGCCACGAGGCATTTTTATTGGGGGCCACGGCCAAGGCG
GCAGCGACATTGGTAACCTACCCGTTGCAGCTGGCACAGGCGAAACTGCG
AGCAGGTCGTGCGCGGGGCGGAGAGGTGAGGCGGCGCAATGTGCTGCGAA
GGCGCTAGTACCTCCACACGCTCCTTCGAGCGCGGTCGGCGGCGGCGGTG
GCGGAGGCACGCCGGGCGTGGGTTTGCGGAGCCACGAGGCATTTTTATTG
GGGGCCACGGCCAAGGCGGCAGCGACATTGGTAACCTACCCGTTGCAGCT
GGCACAGGCGAAACTGCGAGCAGGTCGTGCGCGGGGCGGAGAGGTGAGGC
GGCGCAATGGTCGCGGTGGCCAGCAAGACTGTCCATACCCCGCAGTCACC
GAGCGCACCTGGCGCTCGAGCGTGGGCTGGCAGGTTCTTACCTGCTGGTC
AGGGACCGTGAATATCCTCGGTCGCGGTGGCCAGCAAGACTGTCCATACC
CCGCAGTCACCGAGCGCACCTGGCGCTCGAGCGTGGGCTGGCAGGTTCTT
ACCTGCTGGTCAGGGACCGTGAATATCCTCACCAAGATATATCGACAGAA
CGGGGTACGTGGCATGTACCAGGGCATGCGCGCGAAGCTCCTCCATACGG
TCCTCACCAGCGCGCTGCTGTTCCTGGGATACGAGCGAATACTCGAGACC
AAGATATATCGACAGAACGGGGTACGTGGCATGTACCAGGGCATGCGCGC
GAAGCTCCTCCATACGGTCCTCACCAGCGCGCTGCTGTTCCTGGGATACG
AGCGAATACTCGAGATGATCGCGACCTTCATGGCGGCAATGGGTGAGGAG
AAGCCGTCGTCATCGTCATCGCTGTCCATCTCCGGCTCTCGCAGGGCTAC
CACTGCAGCTGCTGCTCCCTCCCGCCTCTCGAAACCGAAACGCCTCTCGG
CGGCGGTGTCATAGATGATCGCGACCTTCATGGCGGCAATGGGTGAGGAG
AAGCCGTCGTCATCGTCATCGCTGTCCATCTCCGGCTCTCGCAGGGCTAC
CACTGCAGCTGCTGCTCCCTCCCGCCTCTCGAAACCGAAACGCCTCTCGG
CGGCGGTGTCATAG
back to top