mRNA_P-fluviatile_contig91.15433.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig91.15433.1 vs. uniprot
Match: A0A6H5K2S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2S4_9PHAE) HSP 1 Score: 435 bits (1118), Expect = 8.160e-145 Identity = 283/545 (51.93%), Postives = 343/545 (62.94%), Query Frame = 1
Query: 22 RHVDGLNAAKLAMTWKDRQRTRLPLVDLDDNPFCVERRTNEEYQMMKLNKASEANPSLVELTSADVPRTASFVVDAEKPFRDFFKRKRNLLARLLRTASASEIAARGSENRNPKATKARTSRAVPSDPAAETDFAAEFFDQDPGWPSSSGCPHQLKHSHQRKLAGRAEGVDIDTVPILEPYRRQVVLQQPITFGHRPLSASRMFNPSTMATSCGIPI-----GRCSLRSTSPGGGGNDGPASRPTRGEPEAFRLHQQKRVKRGRRNKKVSTRKSTGLSAPMLKALLKGNTKTREGSAA---AGELHQEYFDPARRNISRGSMAAKANHCQAVGRPRGEDLSDFSLDDDGFDQRMWRAVDPAGGGMR-GNLEATWLTSSSREGSRHGSRARSGCSAEGRELRQLFSDERPPWDGTPAPLPAPRDVRRAISSMLMPDPDERQKDKLAKSRKAXXXXXXXXXMAKNEREKELQPFGIKPSGRWEPTPATPRAVVARKEIRRLSESRRERERVMATRVRQAELSVFINKIAPSEQLYRNTLQMAQEKFR 1629
R ++G NAA+LAMTWKDRQRTR+P+VDLDDNPFCVERRTNEE+ MM+LNK KPFR+F ++KRNLLA +R ASAS+ AA+ + N+ T+ R S V SD TD EFF+ + G ++ H R VD+DT+P LEPYRR+VV QQPITFGHRPLSASRMFNP TMATSCGIP +R GGGG+ RGR +K R++TGLSAPMLKALL+G+T T EG AA A + QE F+P +SR S A K N+ G+ EDL+D S++ + D+ WR+VD G G G LE+ WL +SS G HG R R G + EG+EL ++FS ERPPWDG PAPLPAP+ RRAISS+LMPDPDER +DKL KSRKA K+ERE+EL+PF P GRWE PATPRAV+AR+EIRRLSE R ER+R MA +VRQAELSV KIAPSE+LYRNTLQ+AQE+FR
Sbjct: 8 RSLEGQNAARLAMTWKDRQRTRVPVVDLDDNPFCVERRTNEEWHMMQLNK---------------------------KPFREFSRKKRNLLAWSIRAASASDAAAQSTANKTHMPTR-RLSTTVRSD-LDGTDIG-EFFNME------RGMSGRVLHPTDRVE------VDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRGRKKGGGGHXXXXX-----------------XXRGRNSK---PRRTTGLSAPMLKALLRGDTPTGEGGAALVTASQHQQELFEPNGNIVSRDS-APKPNYLVLDGQ---EDLTDSSVNSEKLDESKWRSVDDLGRGEALGELES-WLQTSSHSGLGHG-RRRLGNTKEGQELHRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERERELRPFNPTPIGRWEVCPATPRAVIARQEIRRLSELREERDRAMAKKVRQAELSVLFKKIAPSEKLYRNTLQIAQERFR 484 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig91.15433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig91.15433.1 >prot_P-fluviatile_contig91.15433.1 ID=prot_P-fluviatile_contig91.15433.1|Name=mRNA_P-fluviatile_contig91.15433.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=543bp MVKHPGRRHVDGLNAAKLAMTWKDRQRTRLPLVDLDDNPFCVERRTNEEYback to top mRNA from alignment at P-fluviatile_contig91:6475..13580- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig91.15433.1 ID=mRNA_P-fluviatile_contig91.15433.1|Name=mRNA_P-fluviatile_contig91.15433.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7106bp|location=Sequence derived from alignment at P-fluviatile_contig91:6475..13580- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig91:6475..13580- >mRNA_P-fluviatile_contig91.15433.1 ID=mRNA_P-fluviatile_contig91.15433.1|Name=mRNA_P-fluviatile_contig91.15433.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3258bp|location=Sequence derived from alignment at P-fluviatile_contig91:6475..13580- (Porterinema fluviatile SAG_2381)back to top |