mRNA_P-fluviatile_contig9.15383.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI) HSP 1 Score: 306 bits (785), Expect = 1.760e-104 Identity = 169/188 (89.89%), Postives = 172/188 (91.49%), Query Frame = 1
Query: 1 MPSTLSKLYHAAARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNKHLAVSKALIKAGADVEARGVDGTPLHVAAAKGFHKGMVMLIHAAGGCRSRDLLVLAERAREINADRSHAAGSEAQGDGAS--CALGGPVQVQQQARRTVPGVLSG 558
MPSTLSKLY AAA GSVERTVAVLSQGSV+IDGGYGD G+TPLM ASTMGYLRVVRVLLRLG RVSVADNDGATALHLSIVNKHLAVSKAL+KAGA VEARGVDGTPLHVAAAKGFHKGMVMLIHA GGC SRDLLVLAER EINADRSHAAGSEAQGD AS C LGGPVQVQQQ RTVPGVLSG
Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHA-GGCSSRDLLVLAERLGEINADRSHAAGSEAQGDEASGGCGLGGPVQVQQQGGRTVPGVLSG 187
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI) HSP 1 Score: 214 bits (545), Expect = 6.130e-68 Identity = 114/125 (91.20%), Postives = 117/125 (93.60%), Query Frame = 1
Query: 1 MPSTLSKLYHAAARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNKHLAVSKALIKAGADVEARGVDGTPLHVAAAKGFHKGMVMLIH 375
MPSTLSKLY AAA GSVERTVAVLSQGSVDIDGGYGD G+TPLM ASTMGYLRVVRVLLR G RVSVADNDGATALHLSIV KHLAVS+AL+KAGA VEARGVDGTPLHVAAAKGFHKGMVMLIH
Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIH 125
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 223 bits (567), Expect = 8.060e-65 Identity = 118/132 (89.39%), Postives = 120/132 (90.91%), Query Frame = 1
Query: 1 MPSTLSKLYHAAARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNKHLAVSKALIKAGADVEARGVDGTPLHVAAAKGFHKGMVMLIHAAGGCRS 396
MPSTLSKLYHA A GSVERTVAVLSQGSVDIDGGYGD G+TPLM A TMGYLRVVRVLLRLG RVSVADNDGATALHLSIVNKHLAVSKAL+KAGA VEARGVDGTPLHVAAAKGFHKGMVMLIHA S
Sbjct: 1 MPSTLSKLYHAPASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGANVDS 132
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 154 bits (388), Expect = 6.000e-40 Identity = 87/120 (72.50%), Postives = 94/120 (78.33%), Query Frame = 1
Query: 37 ARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNKHLAVSKALIKAGADVEARGVDGTPLHVAAAKGFHKGMVMLIHAAGGCRS 396
ARGSVERTVA+LS+GSVDIDG YGD G+TPLMVASTMGYLRV RVLLRLG VSVADNDGATALHLS+ N+HLAVSKALIKAGA+VEAR VDG MV+LIHA S
Sbjct: 5 ARGSVERTVALLSRGSVDIDGSYGDAGRTPLMVASTMGYLRVERVLLRLGAGVSVADNDGATALHLSVFNQHLAVSKALIKAGAEVEARCVDG--------------MVVLIHAGANVDS 110
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 138 bits (348), Expect = 6.620e-36 Identity = 76/89 (85.39%), Postives = 78/89 (87.64%), Query Frame = 1
Query: 133 VASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNKHLAVSKALIKAGADVEAR-------GVDGTPLHVAAAKGFHKGMVMLIHA 378
VASTMGYLRVVRVLLRLG RVS ADNDGATALHLSIVNKHLAVSKAL+KAGAD+EAR GV TPLHVAAAKGFHKGMVMLIHA
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHA 125
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 120 bits (301), Expect = 7.500e-31 Identity = 75/125 (60.00%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 1 MPSTLSKLYHAAARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNKHLAVSKALIKAGADVEAR-GVDGTPLHVAAAKGFHKGMVMLI 372
MPSTLSK A GS++ T+A + ID G GD QTPLMVAS +G RVVR LLR G VSVAD+DG TALH S+ + HLAVSK LI+AGAD+EAR G TPLHVAA KGF +GM +L+
Sbjct: 1 MPSTLSK-----ASGSIDPTIA-----TTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGKDTPLHVAATKGFCQGMKLLM 115
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 120 bits (300), Expect = 8.080e-29 Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 1 MPSTLSK-LYHAAARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNKHLAVSKALIKAGADVEARG---------VDG-TPLHVAAAKGFHKGMVMLIHAAGGCRSR 399
+PST S LY AA+ GSVERT+ +LS G +ID + G T LM A+ GYLR+VRVLLR G VSV+ +DG TALH +I ++LAV+KALIKAGA+VEA+ V G TPLH+AA +GF +GMV LI+A SR
Sbjct: 13 VPSTTSDTLYCAASSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSR 156
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 3.120e-14 Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 2
Query: 377 RQVDAGHAISWCWP---------SALEKSTPIVRMLPGLKRKATEPRVLLAALSRYNNKQDGPFLGYSPD 559
RQ +A H++SW WP ++ +K T I RM+P LKR+A +PRVLLAALSRYN KQDG FLGY P+
Sbjct: 411 RQEEAVHSVSWTWPIDNGRSVERASRKKPTSIARMVPLLKRRAAKPRVLLAALSRYNEKQDGAFLGYLPE 480
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 1.030e-13 Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 2
Query: 377 RQVDAGHAISWCWP---------SALEKSTPIVRMLPGLKRKATEPRVLLAALSRYNNKQDGPFLG 547
RQ +A HA+SW WP ++ +KST I RMLP LKR+A +PRVLLAA+SRYNNK DG FLG
Sbjct: 357 RQEEAVHAVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAAMSRYNNKHDGAFLG 422
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Match: D8LJ25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ25_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 5.150e-10 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 2
Query: 452 MLPGLKRKATEPRVLLAALSRYNNKQDGPFLGYSPD 559
MLP LK +A +PRVLLAA+SRYNNKQDGPFLGY P+
Sbjct: 1 MLPLLKLRAAKPRVLLAAMSRYNNKQDGPFLGYLPE 36 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15383.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15383.1 >prot_P-fluviatile_contig9.15383.1 ID=prot_P-fluviatile_contig9.15383.1|Name=mRNA_P-fluviatile_contig9.15383.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=187bp MPSTLSKLYHAAARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGback to top mRNA from alignment at P-fluviatile_contig9:3423487..3424858- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15383.1 ID=mRNA_P-fluviatile_contig9.15383.1|Name=mRNA_P-fluviatile_contig9.15383.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1372bp|location=Sequence derived from alignment at P-fluviatile_contig9:3423487..3424858- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:3423487..3424858- >mRNA_P-fluviatile_contig9.15383.1 ID=mRNA_P-fluviatile_contig9.15383.1|Name=mRNA_P-fluviatile_contig9.15383.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1122bp|location=Sequence derived from alignment at P-fluviatile_contig9:3423487..3424858- (Porterinema fluviatile SAG_2381)back to top |