mRNA_P-fluviatile_contig9.15367.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15367.1
Unique NamemRNA_P-fluviatile_contig9.15367.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5K575_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K575_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 9.400e-87
Identity = 202/485 (41.65%), Postives = 268/485 (55.26%), Query Frame = 3
Query:  432 AMDTDLFSEGGPGLEA-PSLRADEDAVLFL-DEPSPPPSPTLLERLHELAVDDPNEPLFSDDDGEPLGAESQWAN--G*YDDDDSGSAGDGRDPSPQNDGCGPP---LGAVDDHKTKRLDKYMSV*VEGS-WKGGFSSV----LSTQRRRALPFTRTRTFRSWCPFNLSTSIKFLRLCWRGC*PFSEPVTTARVLTWVKSRALPPSIFTTEGGPTTGGC*DDGTHCKGRRIIGARLRYPMQLASQSQAAIPTFIKACVENAGGKVLNDAEAEESGLSSSHIFSVPTEPTGNALSTNMHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGFR 1850
            A D +   +GG G E  P +R+  DA  F  +EP   P   LLERL ELAVD   +P  SDDD EP+G +  WAN    + D       D RD     D   PP    G  +  ++KRLD+ + + + G   KGG        +      ++ ++RTR   +   F++          + G      P+    V T+V S                    D+GT      I       P  L    +   P+FI+ C E                   +H+FSVP EP GNALST+MHG LAR+S FFGFDGLLG RTG+RKVY+ DV M  + DG+T P RL E +W  E+G  L+ VRRFR ++EVRDV+G ER EGLVRVWEE G++S +++ S T++D+CEIYTR+EVS S+HL++ W+GGVRWA WDAFVGEGF+VKR+KRRRQ    R    FVESS  W+R+GT ++P+FGIR+  FR
Sbjct:    2 ATDPESPDDGGQGNEDFPDMRSGSDATEFPPEEPPLLPYRPLLERLDELAVDGRCDPGVSDDDDEPVGPDGGWANYQQWHGDGVVTDLDDSRDELDLKDSDDPPDTTAGYREWGESKRLDE-LHIGLGGKVMKGGAPCPQVPSIGGHVDGSIGYSRTR--HNLKGFDVDDIRHITAKHFYGRRRDHHPLLEV-VETFVPSSK------------------DNGTSVPVYDI-------PCNLLVNRKIQSPSFIETCAE----------------FGRNHLFSVP-EPAGNALSTSMHGRLARNSPFFGFDGLLGARTGNRKVYVNDVVMVTMSDGNTVPVRLLEWYWDMEQGTFLVAVRRFRTRNEVRDVQGGERIEGLVRVWEEEGTSSKVIVHSTTIRDLCEIYTREEVSRSMHLEDEWEGGVRWAVWDAFVGEGFIVKRQKRRRQGDSFRSPPPFVESSASWAREGTGDEPLFGIRKKDFR 440          
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5JWQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ6_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 7.070e-71
Identity = 118/189 (62.43%), Postives = 147/189 (77.78%), Query Frame = 3
Query: 1284 MHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGFR 1850
            MHG LAR+S FFGFDGLLG RTG+RKVY+ DV M  + DG+T P RL E +W  E+  LL+ VRRFR ++EVRD+EG ER EGLVRVWEE  ++S  +L S T+QD+CEIYTR+EVS S+HL++ W+GGVRWA WDAFVGEGF+VKR+KRRRQ    R    FVESS  W+R+GT ++P+FGIR+  FR
Sbjct:    1 MHGRLARNSPFFGFDGLLGARTGNRKVYVNDVVMVTMSDGNTVPVRLLEWYWDMEQDTLLVAVRRFRTRNEVRDIEGGERIEGLVRVWEEECTSSKGILHSTTIQDLCEIYTREEVSRSMHLEDEWEGGVRWAVWDAFVGEGFIVKRQKRRRQGDSFRSPPPFVESSASWAREGTGDEPLFGIRKKDFR 189          
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5J9K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K9_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 9.570e-62
Identity = 108/175 (61.71%), Postives = 133/175 (76.00%), Query Frame = 3
Query: 1110 PMQLASQSQAAIPTFIKACVENAGGKVLNDAEAEESGLSSSHIFSVPTEPTGNALSTNMHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVS 1634
            P  L    +   P+FI+ CV+N+GGKVL   EAE +GLSS+H+ SVPTEP GNALST+MHG LARSS FFGFDGLLG RT +RKVY+ DV M  + DG+T P  L E +W  E+  LL+ VRRFR ++EVRDVEG ER EGLVRVWEE G++S ++L S T+QD+CEIYTR+EVS
Sbjct:  113 PCNLLVNRKIQSPSFIETCVQNSGGKVLRAEEAEPNGLSSNHLCSVPTEPAGNALSTSMHGRLARSSPFFGFDGLLGARTSNRKVYVNDVVMVTMSDGNTVPVWLLEWYWDMEQATLLVAVRRFRIRNEVRDVEGGERIEGLVRVWEEKGTSSKVILHSTTIQDLCEIYTREEVS 287          
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5K0G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G5_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.430e-55
Identity = 94/156 (60.26%), Postives = 119/156 (76.28%), Query Frame = 3
Query: 1383 MFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGFR 1850
            M  + DG+T P RL E +   E+  LL+ VRRFR ++EV DVEG ER E LVRVWEE G++S ++L S T+QD+CEIYTR+EVS S+HL++ W+GGVRWADWDAFVGEGFVVKR+KR RQ    R    FVESS P +R+GT ++P+FGIR+ GFR
Sbjct:    1 MVTMSDGNTVPVRLPEWYCDMEQDTLLVAVRRFRTRNEVCDVEGGERIERLVRVWEEKGTSSKVILHSTTIQDLCEIYTREEVSRSMHLEDEWEGGVRWADWDAFVGEGFVVKRQKRIRQGDSFRSPPPFVESSAPSAREGTGDEPLFGIRKKGFR 156          
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5JYQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ4_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 1.360e-34
Identity = 60/91 (65.93%), Postives = 77/91 (84.62%), Query Frame = 2
Query:  770 QIHVGLGGRIMEGGVQFCSLNTKAKGSPFYPYENLSIMVPFQFVHKYQVSEAMLEGLLTILRTRYDGKGFDVGEIESVTAKHFYNRRRPHH 1042
            ++H+GLGG++MEGG + C+ NTKAK SP++PYENLS+++ +Q VHKYQVSE ML GLL ILRTR++GKGFDV +I  +TAKHFY RRR HH
Sbjct:  122 EVHIGLGGKVMEGGARLCAFNTKAKRSPYFPYENLSVLLFYQLVHKYQVSEVMLTGLLAILRTRHNGKGFDVDDIRHITAKHFYGRRRAHH 212          
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5KML3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KML3_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 8.550e-30
Identity = 85/222 (38.29%), Postives = 118/222 (53.15%), Query Frame = 3
Query: 1179 GGKVLNDAEAEESGLSSSHIFSVPTEPTGNALSTNMHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPG 1844
            GGK+L   E E + L+S H+  VPT   GN +++N +G LA+S+ FFGFDG+  +  G RKVY+ D     +  G     RL E+F+ +    +L+TVR FR   EVR V   ER  GL+RVWE+    S + L +  +  + E+ T    S         DGG  +  WD F  EGFV     +RR  GD+ P   F  S  PW  +GT + P+FG+R  G
Sbjct:   54 GGKLLRGEEIEANSLTSEHVNCVPTRREGNVMNSNHNGALAKSTPFFGFDGIRASVCG-RKVYVHDCCACEV-GGVLTLGRLMEIFYDDVRRLVLVTVRLFRTAAEVRGVGEEERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQNRSG--------DGGHPFP-WDRFYAEGFVTAAGTKRRHQGDAMPK-PFKVSEAPWHAEGTTDKPLFGVRHQG 263          
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 1.610e-28
Identity = 82/222 (36.94%), Postives = 121/222 (54.50%), Query Frame = 3
Query: 1179 GGKVLNDAEAEESGLSSSHIFSVPTEPTGNALSTNMHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPG 1844
            GGK+L   EA  + L+S HI  VPT   GN +++N +G LARS+ FFGFDG+   R   RKVY+ D  + A  +G    CR+ ++F+ E    +++TVR FR   EVR V   ER  GL+RVWE+  +   + L +  +  + E+ T  E++ +   +    GG  +  WD FVGEGFV +   +R       P   F  S +PW  +G    P++G+R  G
Sbjct:  384 GGKILRGEEAAANRLTSDHINCVPTRQEGNVMNSNQNGTLARSTPFFGFDGIR-ARVCGRKVYVNDTCV-AEVEGVVTLCRMLKIFYDEARQLVIVTVRLFRGVSEVRGVRQEERRGGLLRVWEDCTADGEVELKADAVLGLVEMETPHEMAPAGGSQ----GGHNFP-WDRFVGEGFVRRTGTKRPLQSSDLPK-PFTVSESPWCMEGPAERPLWGLRRSG 597          
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 3.530e-26
Identity = 63/145 (43.45%), Postives = 86/145 (59.31%), Query Frame = 3
Query: 1413 PCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGF 1847
            PCRL E+FW  E G ++ TVR FR   EVR+V   E   GLVR+WE+  + + M L+   +  + EIYT DE+    H  E W+ GVR   WD FVGEGFVV+ R +RR+ G+      +  +  PW ++GT  DP+F +R  GF
Sbjct:  161 PCRLLELFWDTESGGVVATVRGFRPVAEVRNVGQDETRGGLVRIWEDCTAGAEMQLNVADVLGLAEIYTADEMEVDQHGGE-WNQGVRCTSWDRFVGEGFVVQARVKRRRSGED-SVQKYEVTHAPWCKEGTSEDPLFVLRREGF 303          
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5K6W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W3_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 2.150e-25
Identity = 78/203 (38.42%), Postives = 109/203 (53.69%), Query Frame = 3
Query: 1359 KVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRR-KRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGFRQMSTI*TSQASRSVSSTTPSTLGR*RTSILWEQRMPAG 1964
            KVY+ D  +  +  G+   CRL E+FW    G ++ TV  FR   EVR V  AE    LVRVWE+  + +    +   +  + EIYT DE+ A  H  E W  GVR   WD F+GEGFVV+ R KRRR + DS     +  +  PW ++GT +DP+F +R  GF   + I   + + S+++TTPST       + WE R   G
Sbjct:  279 KVYVHDKCICEIA-GTPSACRLLELFWDTASGGVVATVEGFRPVAEVRIVGQAEMRGRLVRVWEDCTAGAETQHNVAGVLGLAEIYTADEMEAGKHDGE-WHQGVRCTLWDRFLGEGFVVQARAKRRRSEEDS--TQKYEVTHAPWCKEGTSDDPLFVLRRKGFHLNNDILVFR-TLSLATTTPSTA------LAWETRHTRG 470          
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5JWC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC0_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 2.080e-24
Identity = 133/470 (28.30%), Postives = 189/470 (40.21%), Query Frame = 2
Query:  800 MEGGVQFCSLNTKAKGSPFYPYENLSIMVPFQFVHKYQVSEAMLEGLLTILRTRYDGKGFDVGEIESVTAKHFYNRRRPHHWRLLRRWYPLQRTTDHRCPSTISHATCFSIASCNPHFHQGMCRKCWG*-GFERRGSRGKRVEQQPYF---LGSDGANRQCPQHEHARQPR---------KKFRFFRVRWPVGNKNRRSQGLHRRCRDVCPSRR*HAPMSTARNVLGR----GGRSLVVDRQTFPQERRSARR*GGRALRGS-----RSCVGGSGIGFQHGFKQQDSSGRVRDLYPR*GVSIGALEGTVGW-RGALGRLGCFRWGGLCREAT*AQAAGRGLSACP---RVC*IVH-PLV*AGDQKRPNFWHSGTGVSPNVNNLNFASIPLCVFNDAFNAWEMKNKHSVGATYAGWAWTSNDFQRRRSETLLGTIASPGACVEGEMSLQASVMGELQRGCEGTVRIRGADG 2128
            +EGG +    NTKA GS FYP+      + +   + +Q+S+  L GLL IL    +G GFDVG ++ V A HF NR        +R++ PL +  +   PST    T   +     +       K             GK + ++      L SD  N  C   +     R         +   F  +    G+   R   +H    DVC       P  T   +L        R +V   +TF +     R  G    RG        C     +G +   +  D  G + ++Y    +     +G   W +GA     C  WG    E    QA  +   A     +   + H P    G    P F     G   N  NL F S P+  +NDAFN + M NKHSVG  Y GW W +   QR + +T +GT+AS GAC +GE+ LQ  ++G LQRGC G   +   DG
Sbjct:  151 LEGGPENLRFNTKATGSSFYPFSTKEQQLIYVSQYTHQISQKALGGLLDILLMEDEGCGFDVGGLKGVDAAHFSNR--------MRQYLPLLQVLERDVPSTQQGKTSAVVYDVPVNLLLDRDMKLASETALSEAYPAGKLLREEEAAVNSLTSDHVN--CVPTKQVGNVRETNMNGTLSRTSPFMGIDGIKGSVCGRKVFIH----DVCICAVGGTP--TVCRLLELFWDVESRQVVATVRTF-RSAAEVRHVGETETRGGLQRTWEDCT----VGGELLLEVADVLG-LAEIYTEDEMDADKHDGE--WDQGAR----CDMWGRFLGEGFVVQAGKKRQRAGDDPVQQFEVTHAPWCKEGTPDNPLFVLRREGFHLNNENLAFFSAPVTFYNDAFNCFGMGNKHSVGGGYFGWPWRTQAVQRLKRQTHVGTLASTGACCQGEIGLQCEILGLLQRGCLGECMLTEDDG 592          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5K575_9PHAE9.400e-8741.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWQ6_9PHAE7.070e-7162.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9K9_9PHAE9.570e-6261.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0G5_9PHAE1.430e-5560.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYQ4_9PHAE1.360e-3465.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KML3_9PHAE8.550e-3038.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9M0_9PHAE1.610e-2836.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9E1_9PHAE3.530e-2643.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6W3_9PHAE2.150e-2538.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWC0_9PHAE2.080e-2428.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:3316203..3318678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2270
Cds size756
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15367.1prot_P-fluviatile_contig9.15367.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 3316811..3317566 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817350.5866222-UTR-P-fluviatile_contig9:3316202..33165391622817350.5866222-UTR-P-fluviatile_contig9:3316202..3316539Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3316203..3316539 -
1693572186.6624897-UTR-P-fluviatile_contig9:3316202..33165391693572186.6624897-UTR-P-fluviatile_contig9:3316202..3316539Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3316203..3316539 -
1622817350.5972912-UTR-P-fluviatile_contig9:3316745..33168101622817350.5972912-UTR-P-fluviatile_contig9:3316745..3316810Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3316746..3316810 -
1693572186.6727607-UTR-P-fluviatile_contig9:3316745..33168101693572186.6727607-UTR-P-fluviatile_contig9:3316745..3316810Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3316746..3316810 -
1622817350.620214-UTR-P-fluviatile_contig9:3317566..33186781622817350.620214-UTR-P-fluviatile_contig9:3317566..3318678Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3317567..3318678 -
1693572186.7034588-UTR-P-fluviatile_contig9:3317566..33186781693572186.7034588-UTR-P-fluviatile_contig9:3317566..3318678Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3317567..3318678 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817350.6079934-CDS-P-fluviatile_contig9:3316810..33175661622817350.6079934-CDS-P-fluviatile_contig9:3316810..3317566Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 3316811..3317566 -
1693572186.6852145-CDS-P-fluviatile_contig9:3316810..33175661693572186.6852145-CDS-P-fluviatile_contig9:3316810..3317566Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 3316811..3317566 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15367.1

>prot_P-fluviatile_contig9.15367.1 ID=prot_P-fluviatile_contig9.15367.1|Name=mRNA_P-fluviatile_contig9.15367.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=252bp
MQLASQSQAAIPTFIKACVENAGGKVLNDAEAEESGLSSSHIFSVPTEPT
GNALSTNMHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTH
PCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGS
ASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGF
VVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGFRQMST
I*
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mRNA from alignment at P-fluviatile_contig9:3316203..3318678-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15367.1 ID=mRNA_P-fluviatile_contig9.15367.1|Name=mRNA_P-fluviatile_contig9.15367.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2476bp|location=Sequence derived from alignment at P-fluviatile_contig9:3316203..3318678- (Porterinema fluviatile SAG_2381)
GACCGCTCTCGTCCTCGGCGCAGGGCAGCAGACCTTCTCACTTGGCGGAC GCTGGTGCTGGTTCGTCTGCCAGATCGGAAGAAGGTGAGACAGGATACGG TGTGTTGTTGAACGCACTGATTCGCTTTTTCAAATCGAGGCTATATATAT ATCTCCCGCCTGCCTCCCTGCTGCCCTGTGAGGGAGGTCGCTCGACAAAT ACTAATAGGTCGCACAACGCTGGACGGGTGCACCCCTTGACCCCGCAGAA TTCCGGAGCCGAGAGCCATCATCTCCGTGCCGCAGCCGAGAAACGATTGC AACGGCGCTTTATCTCATTCTGTGTCTTTGTGTCCGGGGTTGGGGAATGC GGATACGCCGCGACCTCTGCTCCAAATGCAGATCGCCGCCTTGATGCCCC TCGCGCGCGTGCGACGGCGGCACCGTTGAAAGCGATGGACACCGATTTGT TCAGCGAGGGCGGGCCAGGCCTCGAGGCACCATCATTGCGTGCCGATGAG GATGCTGTTCTTTTCCTGGATGAACCATCTCCCCCGCCCTCCCCAACTCT TCTCGAGAGGCTCCACGAGCTCGCTGTTGACGACCCAAACGAACCGCTGT TTAGCGACGACGATGGCGAGCCGTTAGGTGCCGAAAGTCAATGGGCGAAC GGGTAGTATGACGACGATGACTCGGGATCTGCAGGAGATGGGAGGGATCC GTCACCCCAAAACGATGGTTGTGGTCCGCCGCTCGGTGCCGTTGACGACC ACAAGACGAAACGCCTCGACAAATACATGTCGGTCTAGGTGGAAGGATCA TGGAAGGGGGGGTTCAGTTCTGTTCTCTCAACACAAAGGCGAAGGGCTCT CCCTTTTACCCGTACGAGAACCTTTCGATCATGGTGCCCTTTCAATTTGT CCACAAGTATCAAGTTTCTGAGGCTATGCTGGAGGGGCTGTTGACCATTC TCCGAACCCGTTACGACGGCAAGGGTTTTGACGTGGGTGAAATCGAGAGC GTTACCGCCAAGCATTTTTACAACCGAAGGCGGCCCCACCACTGGAGGTT GTTGAGACGATGGTACCCACTGCAAAGGACGACGGATCATCGGTGCCCGT CTACGATATCCCATGCAACTTGCTTCTCAATCGCAAGCTGCAATCCCCAC TTTCATCAAGGCATGTGTCGAAAATGCTGGGGGTAAGGTTTTGAACGACG CGGAAGCCGAGGAAAGCGGGTTGAGCAGCAGCCATATTTTCTCGGTTCCG ACGGAGCCAACAGGCAATGCCCTCAGCACGAACATGCACGGCAACCTCGC AAGAAGTTCCGCTTTTTTCGGGTTCGATGGCCTGTTGGGAACAAGAACCG GAGATCGCAAGGTTTACATCGGCGATGTCGCGATGTTTGCCCTTCCCGAC GGTAGCACGCACCCATGTCGACTGCGCGAAATGTTCTGGGGCGAGGAGGA AGGAGCCTTGTTGTTGACCGTCAGACGTTTCCGCAAGAAAGACGAAGTGC GCGACGTTGAGGGGGCCGAGCGCTGCGAGGGTCTCGTTCGTGTGTGGGAG GAAGCGGGATCGGCTTCCAACATGGTTTTAAGCAGCAAGACTCTTCAGGA CGTGTGCGAGATTTATACCCGAGATGAGGTGTCAGCATCGGTGCACTTGA AGGAACCGTGGGATGGAGGGGTGCGTTGGGCCGACTGGGATGCTTTCGTT GGGGAGGGCTTTGTCGTGAAGCGACGTAAGCGCAGGCGGCAGGACGGGGA CTCTCGGCCTGCCCTCGTGTTTGTTGAATCGTCCACCCCCTGGTCTAGGC AGGGGACCAGAAACGACCCAATTTTTGGCATTCGGGAACCGGGGTTTCGC CAAATGTCAACAATCTGAACTTCGCAAGCATCCCGCTCTGTGTCTTCAAC GACGCCTTCAACGCTTGGGAGATGAAGAACAAGGCGAGTGCATATCCGCT CCCTGCATTACATGCACGTGTTGTATTGTCGTCCGCGCTTTTCTGCAGGA GTAAACTCCGTTCCTTTATGCAACCCCCTCTCGCCGCCCCTCCCGCCCGC GCTGTCTCGTCTCTTCTGTCGGTGCCGCGCTCGATCGACACTACGAACAA ATATGCTCGCCGGCTCTCGCGCTCTCGTCCATGCACCAGCATTCTGTGGG AGCAACGTATGCCGGCTGGGCCTGGACCAGTAACGATTTCCAGCGAAGGC GATCGGAGACGTTGCTCGGCACCATTGCTTCGCCGGGCGCATGTGTTGAG GGCGAGATGTCGCTGCAAGCAAGTGTCATGGGGGAACTTCAGCGAGGGTG TGAGGGCACCGTCAGAATACGGGGGGCGGACGGCAGGATTCTCAACGTCG AGTTGATGGCGTTGCTTCGAGAAGCCTGGGACGTTTTTTTTCTTGGTGTG CAGAGTCTACAACACCGGGCAAATAAGAGATTTCGAAGTGTAGACGGGAA GGATGAACGAGAGTCGGGGGGCTTGT
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Coding sequence (CDS) from alignment at P-fluviatile_contig9:3316203..3318678-

>mRNA_P-fluviatile_contig9.15367.1 ID=mRNA_P-fluviatile_contig9.15367.1|Name=mRNA_P-fluviatile_contig9.15367.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1512bp|location=Sequence derived from alignment at P-fluviatile_contig9:3316203..3318678- (Porterinema fluviatile SAG_2381)
ATGCAACTTGCTTCTCAATCGCAAGCTGCAATCCCCACTTTCATCAAGGC
ATGTGTCGAAAATGCTGGGGGTAAGGTTTTGAACGACGCGGAAGCCGAGG
AAAGCGGGTTGAGCAGCAGCCATATTTTCTCGGTTCCGACGGAGCCAACA
GGCAATGCCCTCAGCACGAACATGCACGGCAACCTCGCAAGAAGTTCCGC
TTTTTTCGGGTTCGATGGCCTGTTGGGAACAAGAACCGGAGATCGCAAGG
TTTACATCGGCGATGTCGCGATGTTTGCCCTTCCCGACGGTAGCACGCAC
CCATGTCGACTGCGCGAAATGTTCTGGGGCGAGGAGGAAGGAGCCTTGTT
GTTGACCGTCAGACGTTTCCGCAAGAAAGACGAAGTGCGCGACGTTGAGG
GGGCCGAGCGCTGCGAGGGTCTCGTTCGTGTGTGGGAGGAAGCGGGATCG
GCTTCCAACATGGTTTTAAGCAGCAAGACTCTTCAGGACGTGTGCGAGAT
TTATACCCGAGATGAGGTGTCAGCATCGGTGCACTTGAAGGAACCGTGGG
ATGGAGGGGTGCGTTGGGCCGACTGGGATGCTTTCGTTGGGGAGGGCTTT
GTCGTGAAGCGACGTAAGCGCAGGCGGCAGGACGGGGACTCTCGGCCTGC
CCTCGTGTTTGTTGAATCGTCCACCCCCTGGTCTAGGCAGGGGACCAGAA
ACGACCCAATTTTTGGCATTCGGGAACCGGGGTTTCGCCAAATGTCAACA
ATCTGAATGCAACTTGCTTCTCAATCGCAAGCTGCAATCCCCACTTTCAT
CAAGGCATGTGTCGAAAATGCTGGGGGTAAGGTTTTGAACGACGCGGAAG
CCGAGGAAAGCGGGTTGAGCAGCAGCCATATTTTCTCGGTTCCGACGGAG
CCAACAGGCAATGCCCTCAGCACGAACATGCACGGCAACCTCGCAAGAAG
TTCCGCTTTTTTCGGGTTCGATGGCCTGTTGGGAACAAGAACCGGAGATC
GCAAGGTTTACATCGGCGATGTCGCGATGTTTGCCCTTCCCGACGGTAGC
ACGCACCCATGTCGACTGCGCGAAATGTTCTGGGGCGAGGAGGAAGGAGC
CTTGTTGTTGACCGTCAGACGTTTCCGCAAGAAAGACGAAGTGCGCGACG
TTGAGGGGGCCGAGCGCTGCGAGGGTCTCGTTCGTGTGTGGGAGGAAGCG
GGATCGGCTTCCAACATGGTTTTAAGCAGCAAGACTCTTCAGGACGTGTG
CGAGATTTATACCCGAGATGAGGTGTCAGCATCGGTGCACTTGAAGGAAC
CGTGGGATGGAGGGGTGCGTTGGGCCGACTGGGATGCTTTCGTTGGGGAG
GGCTTTGTCGTGAAGCGACGTAAGCGCAGGCGGCAGGACGGGGACTCTCG
GCCTGCCCTCGTGTTTGTTGAATCGTCCACCCCCTGGTCTAGGCAGGGGA
CCAGAAACGACCCAATTTTTGGCATTCGGGAACCGGGGTTTCGCCAAATG
TCAACAATCTGA
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