mRNA_P-fluviatile_contig9.15367.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5K575_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K575_9PHAE) HSP 1 Score: 300 bits (769), Expect = 9.400e-87 Identity = 202/485 (41.65%), Postives = 268/485 (55.26%), Query Frame = 3
Query: 432 AMDTDLFSEGGPGLEA-PSLRADEDAVLFL-DEPSPPPSPTLLERLHELAVDDPNEPLFSDDDGEPLGAESQWAN--G*YDDDDSGSAGDGRDPSPQNDGCGPP---LGAVDDHKTKRLDKYMSV*VEGS-WKGGFSSV----LSTQRRRALPFTRTRTFRSWCPFNLSTSIKFLRLCWRGC*PFSEPVTTARVLTWVKSRALPPSIFTTEGGPTTGGC*DDGTHCKGRRIIGARLRYPMQLASQSQAAIPTFIKACVENAGGKVLNDAEAEESGLSSSHIFSVPTEPTGNALSTNMHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGFR 1850
A D + +GG G E P +R+ DA F +EP P LLERL ELAVD +P SDDD EP+G + WAN + D D RD D PP G + ++KRLD+ + + + G KGG + ++ ++RTR + F++ + G P+ V T+V S D+GT I P L + P+FI+ C E +H+FSVP EP GNALST+MHG LAR+S FFGFDGLLG RTG+RKVY+ DV M + DG+T P RL E +W E+G L+ VRRFR ++EVRDV+G ER EGLVRVWEE G++S +++ S T++D+CEIYTR+EVS S+HL++ W+GGVRWA WDAFVGEGF+VKR+KRRRQ R FVESS W+R+GT ++P+FGIR+ FR
Sbjct: 2 ATDPESPDDGGQGNEDFPDMRSGSDATEFPPEEPPLLPYRPLLERLDELAVDGRCDPGVSDDDDEPVGPDGGWANYQQWHGDGVVTDLDDSRDELDLKDSDDPPDTTAGYREWGESKRLDE-LHIGLGGKVMKGGAPCPQVPSIGGHVDGSIGYSRTR--HNLKGFDVDDIRHITAKHFYGRRRDHHPLLEV-VETFVPSSK------------------DNGTSVPVYDI-------PCNLLVNRKIQSPSFIETCAE----------------FGRNHLFSVP-EPAGNALSTSMHGRLARNSPFFGFDGLLGARTGNRKVYVNDVVMVTMSDGNTVPVRLLEWYWDMEQGTFLVAVRRFRTRNEVRDVQGGERIEGLVRVWEEEGTSSKVIVHSTTIRDLCEIYTREEVSRSMHLEDEWEGGVRWAVWDAFVGEGFIVKRQKRRRQGDSFRSPPPFVESSASWAREGTGDEPLFGIRKKDFR 440
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5JWQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ6_9PHAE) HSP 1 Score: 254 bits (649), Expect = 7.070e-71 Identity = 118/189 (62.43%), Postives = 147/189 (77.78%), Query Frame = 3
Query: 1284 MHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGFR 1850
MHG LAR+S FFGFDGLLG RTG+RKVY+ DV M + DG+T P RL E +W E+ LL+ VRRFR ++EVRD+EG ER EGLVRVWEE ++S +L S T+QD+CEIYTR+EVS S+HL++ W+GGVRWA WDAFVGEGF+VKR+KRRRQ R FVESS W+R+GT ++P+FGIR+ FR
Sbjct: 1 MHGRLARNSPFFGFDGLLGARTGNRKVYVNDVVMVTMSDGNTVPVRLLEWYWDMEQDTLLVAVRRFRTRNEVRDIEGGERIEGLVRVWEEECTSSKGILHSTTIQDLCEIYTREEVSRSMHLEDEWEGGVRWAVWDAFVGEGFIVKRQKRRRQGDSFRSPPPFVESSASWAREGTGDEPLFGIRKKDFR 189
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5J9K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K9_9PHAE) HSP 1 Score: 218 bits (556), Expect = 9.570e-62 Identity = 108/175 (61.71%), Postives = 133/175 (76.00%), Query Frame = 3
Query: 1110 PMQLASQSQAAIPTFIKACVENAGGKVLNDAEAEESGLSSSHIFSVPTEPTGNALSTNMHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVS 1634
P L + P+FI+ CV+N+GGKVL EAE +GLSS+H+ SVPTEP GNALST+MHG LARSS FFGFDGLLG RT +RKVY+ DV M + DG+T P L E +W E+ LL+ VRRFR ++EVRDVEG ER EGLVRVWEE G++S ++L S T+QD+CEIYTR+EVS
Sbjct: 113 PCNLLVNRKIQSPSFIETCVQNSGGKVLRAEEAEPNGLSSNHLCSVPTEPAGNALSTSMHGRLARSSPFFGFDGLLGARTSNRKVYVNDVVMVTMSDGNTVPVWLLEWYWDMEQATLLVAVRRFRIRNEVRDVEGGERIEGLVRVWEEKGTSSKVILHSTTIQDLCEIYTREEVS 287
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5K0G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G5_9PHAE) HSP 1 Score: 198 bits (503), Expect = 1.430e-55 Identity = 94/156 (60.26%), Postives = 119/156 (76.28%), Query Frame = 3
Query: 1383 MFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGFR 1850
M + DG+T P RL E + E+ LL+ VRRFR ++EV DVEG ER E LVRVWEE G++S ++L S T+QD+CEIYTR+EVS S+HL++ W+GGVRWADWDAFVGEGFVVKR+KR RQ R FVESS P +R+GT ++P+FGIR+ GFR
Sbjct: 1 MVTMSDGNTVPVRLPEWYCDMEQDTLLVAVRRFRTRNEVCDVEGGERIERLVRVWEEKGTSSKVILHSTTIQDLCEIYTREEVSRSMHLEDEWEGGVRWADWDAFVGEGFVVKRQKRIRQGDSFRSPPPFVESSAPSAREGTGDEPLFGIRKKGFR 156
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5JYQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ4_9PHAE) HSP 1 Score: 142 bits (357), Expect = 1.360e-34 Identity = 60/91 (65.93%), Postives = 77/91 (84.62%), Query Frame = 2
Query: 770 QIHVGLGGRIMEGGVQFCSLNTKAKGSPFYPYENLSIMVPFQFVHKYQVSEAMLEGLLTILRTRYDGKGFDVGEIESVTAKHFYNRRRPHH 1042
++H+GLGG++MEGG + C+ NTKAK SP++PYENLS+++ +Q VHKYQVSE ML GLL ILRTR++GKGFDV +I +TAKHFY RRR HH
Sbjct: 122 EVHIGLGGKVMEGGARLCAFNTKAKRSPYFPYENLSVLLFYQLVHKYQVSEVMLTGLLAILRTRHNGKGFDVDDIRHITAKHFYGRRRAHH 212
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5KML3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KML3_9PHAE) HSP 1 Score: 135 bits (339), Expect = 8.550e-30 Identity = 85/222 (38.29%), Postives = 118/222 (53.15%), Query Frame = 3
Query: 1179 GGKVLNDAEAEESGLSSSHIFSVPTEPTGNALSTNMHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPG 1844
GGK+L E E + L+S H+ VPT GN +++N +G LA+S+ FFGFDG+ + G RKVY+ D + G RL E+F+ + +L+TVR FR EVR V ER GL+RVWE+ S + L + + + E+ T S DGG + WD F EGFV +RR GD+ P F S PW +GT + P+FG+R G
Sbjct: 54 GGKLLRGEEIEANSLTSEHVNCVPTRREGNVMNSNHNGALAKSTPFFGFDGIRASVCG-RKVYVHDCCACEV-GGVLTLGRLMEIFYDDVRRLVLVTVRLFRTAAEVRGVGEEERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQNRSG--------DGGHPFP-WDRFYAEGFVTAAGTKRRHQGDAMPK-PFKVSEAPWHAEGTTDKPLFGVRHQG 263
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE) HSP 1 Score: 134 bits (337), Expect = 1.610e-28 Identity = 82/222 (36.94%), Postives = 121/222 (54.50%), Query Frame = 3
Query: 1179 GGKVLNDAEAEESGLSSSHIFSVPTEPTGNALSTNMHGNLARSSAFFGFDGLLGTRTGDRKVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPG 1844
GGK+L EA + L+S HI VPT GN +++N +G LARS+ FFGFDG+ R RKVY+ D + A +G CR+ ++F+ E +++TVR FR EVR V ER GL+RVWE+ + + L + + + E+ T E++ + + GG + WD FVGEGFV + +R P F S +PW +G P++G+R G
Sbjct: 384 GGKILRGEEAAANRLTSDHINCVPTRQEGNVMNSNQNGTLARSTPFFGFDGIR-ARVCGRKVYVNDTCV-AEVEGVVTLCRMLKIFYDEARQLVIVTVRLFRGVSEVRGVRQEERRGGLLRVWEDCTADGEVELKADAVLGLVEMETPHEMAPAGGSQ----GGHNFP-WDRFVGEGFVRRTGTKRPLQSSDLPK-PFTVSESPWCMEGPAERPLWGLRRSG 597
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE) HSP 1 Score: 126 bits (317), Expect = 3.530e-26 Identity = 63/145 (43.45%), Postives = 86/145 (59.31%), Query Frame = 3
Query: 1413 PCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRRKRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGF 1847
PCRL E+FW E G ++ TVR FR EVR+V E GLVR+WE+ + + M L+ + + EIYT DE+ H E W+ GVR WD FVGEGFVV+ R +RR+ G+ + + PW ++GT DP+F +R GF
Sbjct: 161 PCRLLELFWDTESGGVVATVRGFRPVAEVRNVGQDETRGGLVRIWEDCTAGAEMQLNVADVLGLAEIYTADEMEVDQHGGE-WNQGVRCTSWDRFVGEGFVVQARVKRRRSGED-SVQKYEVTHAPWCKEGTSEDPLFVLRREGF 303
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5K6W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W3_9PHAE) HSP 1 Score: 123 bits (308), Expect = 2.150e-25 Identity = 78/203 (38.42%), Postives = 109/203 (53.69%), Query Frame = 3
Query: 1359 KVYIGDVAMFALPDGSTHPCRLREMFWGEEEGALLLTVRRFRKKDEVRDVEGAERCEGLVRVWEEAGSASNMVLSSKTLQDVCEIYTRDEVSASVHLKEPWDGGVRWADWDAFVGEGFVVKRR-KRRRQDGDSRPALVFVESSTPWSRQGTRNDPIFGIREPGFRQMSTI*TSQASRSVSSTTPSTLGR*RTSILWEQRMPAG 1964
KVY+ D + + G+ CRL E+FW G ++ TV FR EVR V AE LVRVWE+ + + + + + EIYT DE+ A H E W GVR WD F+GEGFVV+ R KRRR + DS + + PW ++GT +DP+F +R GF + I + + S+++TTPST + WE R G
Sbjct: 279 KVYVHDKCICEIA-GTPSACRLLELFWDTASGGVVATVEGFRPVAEVRIVGQAEMRGRLVRVWEDCTAGAETQHNVAGVLGLAEIYTADEMEAGKHDGE-WHQGVRCTLWDRFLGEGFVVQARAKRRRSEEDS--TQKYEVTHAPWCKEGTSDDPLFVLRRKGFHLNNDILVFR-TLSLATTTPSTA------LAWETRHTRG 470
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Match: A0A6H5JWC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC0_9PHAE) HSP 1 Score: 120 bits (300), Expect = 2.080e-24 Identity = 133/470 (28.30%), Postives = 189/470 (40.21%), Query Frame = 2
Query: 800 MEGGVQFCSLNTKAKGSPFYPYENLSIMVPFQFVHKYQVSEAMLEGLLTILRTRYDGKGFDVGEIESVTAKHFYNRRRPHHWRLLRRWYPLQRTTDHRCPSTISHATCFSIASCNPHFHQGMCRKCWG*-GFERRGSRGKRVEQQPYF---LGSDGANRQCPQHEHARQPR---------KKFRFFRVRWPVGNKNRRSQGLHRRCRDVCPSRR*HAPMSTARNVLGR----GGRSLVVDRQTFPQERRSARR*GGRALRGS-----RSCVGGSGIGFQHGFKQQDSSGRVRDLYPR*GVSIGALEGTVGW-RGALGRLGCFRWGGLCREAT*AQAAGRGLSACP---RVC*IVH-PLV*AGDQKRPNFWHSGTGVSPNVNNLNFASIPLCVFNDAFNAWEMKNKHSVGATYAGWAWTSNDFQRRRSETLLGTIASPGACVEGEMSLQASVMGELQRGCEGTVRIRGADG 2128
+EGG + NTKA GS FYP+ + + + +Q+S+ L GLL IL +G GFDVG ++ V A HF NR +R++ PL + + PST T + + K GK + ++ L SD N C + R + F + G+ R +H DVC P T +L R +V +TF + R G RG C +G + + D G + ++Y + +G W +GA C WG E QA + A + + H P G P F G N NL F S P+ +NDAFN + M NKHSVG Y GW W + QR + +T +GT+AS GAC +GE+ LQ ++G LQRGC G + DG
Sbjct: 151 LEGGPENLRFNTKATGSSFYPFSTKEQQLIYVSQYTHQISQKALGGLLDILLMEDEGCGFDVGGLKGVDAAHFSNR--------MRQYLPLLQVLERDVPSTQQGKTSAVVYDVPVNLLLDRDMKLASETALSEAYPAGKLLREEEAAVNSLTSDHVN--CVPTKQVGNVRETNMNGTLSRTSPFMGIDGIKGSVCGRKVFIH----DVCICAVGGTP--TVCRLLELFWDVESRQVVATVRTF-RSAAEVRHVGETETRGGLQRTWEDCT----VGGELLLEVADVLG-LAEIYTEDEMDADKHDGE--WDQGAR----CDMWGRFLGEGFVVQAGKKRQRAGDDPVQQFEVTHAPWCKEGTPDNPLFVLRREGFHLNNENLAFFSAPVTFYNDAFNCFGMGNKHSVGGGYFGWPWRTQAVQRLKRQTHVGTLASTGACCQGEIGLQCEILGLLQRGCLGECMLTEDDG 592 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15367.1 >prot_P-fluviatile_contig9.15367.1 ID=prot_P-fluviatile_contig9.15367.1|Name=mRNA_P-fluviatile_contig9.15367.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=252bp MQLASQSQAAIPTFIKACVENAGGKVLNDAEAEESGLSSSHIFSVPTEPTback to top mRNA from alignment at P-fluviatile_contig9:3316203..3318678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15367.1 ID=mRNA_P-fluviatile_contig9.15367.1|Name=mRNA_P-fluviatile_contig9.15367.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2476bp|location=Sequence derived from alignment at P-fluviatile_contig9:3316203..3318678- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:3316203..3318678- >mRNA_P-fluviatile_contig9.15367.1 ID=mRNA_P-fluviatile_contig9.15367.1|Name=mRNA_P-fluviatile_contig9.15367.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1512bp|location=Sequence derived from alignment at P-fluviatile_contig9:3316203..3318678- (Porterinema fluviatile SAG_2381)back to top |