mRNA_P-fluviatile_contig9.15366.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15366.1
Unique NamemRNA_P-fluviatile_contig9.15366.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Match: A0A6H5JWQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ6_9PHAE)

HSP 1 Score: 536 bits (1382), Expect = 3.560e-170
Identity = 283/461 (61.39%), Postives = 322/461 (69.85%), Query Frame = 1
Query: 2092 VFLRGGPLTWVSDSPQRAKTLYTKHPNNSTNLPCPYCKARQDEHHPTCGDLGNSKYNIAANRRTWGEAQDGWSELMALESDRVEQTQRSKELGMVAPTSISSGVLGRPLWDKMYLDPRRHV--ESLHAGALGAQALVQL-FFLALLNEAGREAVSSIVRQGSTLYPPATAPLKDICSNYTSLKGTDKWLLGSILLLVARCVLHDTTSLGRYLKQRELHALKATWGGEQAVLVQLRKLVQV*SALTYAVRSPSFNEAERNKLMKHARDSVGVYAELLGRGGVRTTVHSALHYVDAIEDHGRMPDASTGEAAHQMNKKVNKSNSGRNPAQHYVRRFNMDFAMSAPVDRIPWKVTTFDRTLKQHVVSYTRAGPGCSAVLRALGDVLPGGLSSAPTDIRAASTPTESQRRGQFPGAAKWSSVLWKAGDLAGGDEGG--WEERLSTGPIRPDEATLLAAYRTYFGC 3459
            +FLRGGPLTWVSDSPQRA  LY KHPNNST LPCPYCKA Q+E  PTCGDLGN++Y++ ANRRTWGEAQDGW EL AL+    EQT+RS ELG++APT +S GVLGRPLWDK++++P RHV  ESLHA AL A A V   FF      +   +  SI+ QGSTLYPPATAPLKDIC+NY+SLKG+DKWLLGSILLLV+RCVLHD T+L  Y+K REL ALK TWGGEQAVL QLRKL+QV SALT+AVRSPSF +AER KLM+HARD+VGVYAELLGRGGVRTTVHSALHYV AIE+H                                                                V   +AG GCSAVLR+LG VLPGGLS  PTD RAASTPT +QR  QFPGAA W+SVLW+AG   G D GG  WE R++TGP+ PDE TL+ AY TYF C
Sbjct:  251 IFLRGGPLTWVSDSPQRAILLYCKHPNNSTKLPCPYCKADQEERLPTCGDLGNARYDVEANRRTWGEAQDGWRELQALDLAPNEQTKRSAELGIMAPTGVSGGVLGRPLWDKVFINPARHVPVESLHADALTAGAGVGAGFFSGPPERSWPGSEFSILWQGSTLYPPATAPLKDICTNYSSLKGSDKWLLGSILLLVSRCVLHDATALKEYVKPRELQALKDTWGGEQAVLAQLRKLLQVASALTFAVRSPSFYKAERKKLMEHARDTVGVYAELLGRGGVRTTVHSALHYVQAIEEH----------------------------------------------------------------VETVKAGSGCSAVLRSLGHVLPGGLSFVPTDARAASTPTAAQRAAQFPGAATWTSVLWEAGSPRGNDAGGGGWESRIATGPLHPDEKTLIGAYNTYFSC 647          
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 8.870e-122
Identity = 239/539 (44.34%), Postives = 330/539 (61.22%), Query Frame = 1
Query: 2038 C*GRDVAASKCHGGTSARVFLRGGPLTWVSDSPQRAKTLYTKHPNNSTNLPCPYCKARQDEHHPTCGDLGNSKYNIAANRRTWGEAQDGWSELMALESDRVEQTQRSKELGMVAPTSISSGVLGRPLWDKMYLDPRRHV--ESLHAGALGAQALVQLFFLALLNEAGREAVSSIVRQGSTL-YPPATAPLKDICSNYTSLKGTDKWLLGSILLLVARCVLHDTTSLGRYLKQRELHALKATWGGEQAVLVQLRKLVQV*SALTYAVRSPSFNEAERNKLMKHARDS--VGVYAELLGRGGVRTTVHSALHYVDAIEDHGRMPDASTGEAAHQMNKKVNKSNSGRNPAQHYVRRFNMDFAMSAPVDRIPWKVTTFDRTLKQHVVSYTRAGPGCSAVLRALGDVLPGGLSSAPTDIRAASTPTESQRRGQFPGAAKWSSVLWKAGDLAGG-----DEGGWEERLSTGPIRPDEATLLAAYRTYFGCDPGSACLDDRCPNCWIDSSALDKQGIECSRFKHGAPLRASSGLGRWKGGDVRASA 3624
            C GR V   +    +   VF+RGG L    D P R+K L TK PNN +  PC YC     +   T GD+GN +++I  +RRT G   DG+SEL AL  D ++Q +RSKELG+VAP +  SG L  PL+  M + P  HV  E LH  ALG   L Q+F L LL++ GR  VS+I+ Q S+L YPP T  LKDI ++Y SL G+DKW L SI+LLV R VL D  S+ R +K+R++ A KA WG  ++VL  LR L+Q+ S L++A+R+PS+N+ E  +L   ARD+  VG +++++GR G R T+HS LH V+AI  HG  PDASTGE AHQMNK     + GR P+ H  +R N++ A+ A  + +P+++T ++R+   H     + G GC  ++++L   L  G +  PTDI A +  T +Q RGQF G+A W++ L+ AG  A       D G W  RL +   RPD A LL  Y+ +F CD   AC + RCPNCW+    L+   IECSR+    P+ AS G+GR KGGDV+++A
Sbjct:  113 CLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSHGDDE-TGGDVGNPQFDIDKHRRTSGRTMDGFSELEALADDPLQQEERSKELGLVAPNA--SG-LKLPLYHAMRIVPGDHVPVERLHFDALGQCQLCQVFCLELLSKKGRRLVSAIMAQKSSLLYPPGTDKLKDILTDYPSLTGSDKWTLQSIMLLVFRVVLQDIPSMRRNMKKRDMKAFKAEWGTYESVLDALRTLIQMVSLLSFALRAPSYNDKELRQLDNLARDAPGVGAFSQMMGRTGSRPTIHSMLHAVEAIRLHGVCPDASTGEHAHQMNKSGKAVDCGRMPSLHMAKRANVNLALVALSNGLPYRITKYNRSFNAHEAVSVKPGAGCVQLMQSLASFL--GHARVPTDIHAKAIQTPAQLRGQFQGSAVWTASLFNAGAGAPALNEQQDGGEWLSRLESSKFRPDNAALLGGYKKFFACDMAGACSNIRCPNCWVGDD-LETVTIECSRYLR-VPMAASCGVGRLKGGDVKSAA 643          
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 8.260e-114
Identity = 231/531 (43.50%), Postives = 317/531 (59.70%), Query Frame = 1
Query: 2038 C*GRDVAASKCHGGTSARVFLRGGPLTWVSDSPQRAKTLYTKHPNNSTNLPCPYCKARQDEHHPTCGDLGNSKYNIAANRRTWGEAQDGWSELMALESDRVEQTQRSKELGMVAPTSISSGVLGRPLWDKMYLDPRRHV--ESLHAGALGAQALVQLFFLALLNEAGREAVSSIVRQG-STLYPPATAPLKDICSNYTSLKGTDKWLLGSILLLVARCVLHDTTSLGRYLKQRELHALKATWGGEQAVLVQLRKLVQV*SALTYAVRSPSFNEAERNKLMKHARDSVGVYAELLGRGGVRTTVHSALHYVDAIEDHGRMPDASTGEAAHQMNKKVNKSNSGRNPAQHYVRRFNMDFAMSAPVDRIPWKVTTFDRTLKQHVVSYTRAGPGCSAVLRALGDVLPGGLSSAPTDIRAASTPTESQRRGQFPGAAKWSSVLWKAGDLAGGDEGGWEERLSTGPIRPDEATLLAAYRTYFGCDPGSACLDDRCPNCWIDSSALDKQGIECSRFKHGAPLRASSGLGRWKGGDVRAS 3621
            C GR     +        VF+RGG L    D   R+K L TK PN+ +  PC YC  RQ     T GDLGN +++I  +RRTWG+   G+ EL  L  D  E  +RSKELG+V P +  SG L  PL+D M + P  +V  E LH  ALG   L Q+FFL +L+ AGR  V +I+ Q  S LYPP T  +KDI +NY SL G+DKW L SI+LLV R VL +  ++ R +  RE++ LKA WG  + +L  LR+L+   S L++A+R+PSF E E  +L K ARD+V  +++++GR G R T+HS LH V+ I  HG  PDAST E  HQ NK     + GRNP++H  +R N++ A+ A  + +P+ VT ++R  + H +   R G GC  ++++L  ++  G    PTDI A +  T +Q RGQFPG+A W++ L+K GD    D G W  R+++   RPD  TLL  Y+ Y+GCD    C   RCPNCW    AL+   I+CSR     P+ AS GLGR KGGDV+++
Sbjct:  681 CLGRAKLTDQEGAAFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSRHPCAYCMVRQRTD-DTSGDLGNPRFDIDKHRRTWGQITKGFEELHGLADDPRELERRSKELGLVEPDA--SG-LPLPLYDAMRVVPTENVPVERLHFDALGQSQLCQIFFLEMLSTAGRRLVGAIMAQKPSLLYPPGTGKIKDIVTNYASLTGSDKWTLQSIMLLVFRMVLQNVPAMRRNMNTREINGLKAEWGTYEGLLEALRELMIRSSLLSFALRAPSFTEPELRQLDKLARDAVEAFSKIMGRTGSRPTIHSILHTVETIRLHGLCPDASTCEHTHQTNKSGRSVDCGRNPSKHMAQRANVNSALLALSNGLPYSVTRYNRQDRVHEIVSVRPGDGCVRLMKSLASLV--GHDGVPTDIHAEAVQTPAQLRGQFPGSAVWTASLFKTGDEQRQD-GDWLLRVASSKFRPDGQTLLRGYKKYYGCDMSGTCTSSRCPNCWGGDGALEYLSIDCSRCIR-VPMAASCGLGRLKGGDVKST 1203          
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE)

HSP 1 Score: 380 bits (976), Expect = 4.690e-108
Identity = 220/519 (42.39%), Postives = 311/519 (59.92%), Query Frame = 1
Query: 2092 VFLRGGPLTWVSDSPQRAKTLYTKHPNNSTNLPCPYCKARQDEHHPTCGDLGNSKYNIAANRRTWGEAQDGWSELMALESDRVEQTQRSKELGMVAPTSISSGVLGRPLWDKMYLDPRRHVESLHAGA------LGAQALVQLFFLALLNEAGREAVSSIVRQG-STLYPPATAPLKDICSNYTSLKGTDKWLLGSILLLVARCVLHDTTSLGRYLKQRELHALKATWGGEQAVLVQLRKLVQV*SALTYAVRSPSFNEAERNKLMKHARDSVGVYAELLGRGGVRTTVHSALHYVDAIEDHGRMPDASTGEAAHQMNKKVNKSNSGRNPAQHYVRRFNMDFAMSAPVDRIPWKVTTFDRTLKQHVVSYTRAGPGCSAVLRALGDVLPGGLSSAPTDIRAASTPTESQRRGQFPGAAKWSSVLWKAGDLAGGDEGGWEERLSTGPIRPDEATLLAAYRTYFGCDPGSACLDDRCPNCWIDSSALDKQGIECSRFKHGAPLRASSGLGRWKGGDVRASAR 3627
            VF+RGG L W  D P RAK L +K  N+ +  PCPYC   Q ++  T GDLGN++Y+I A+RRTWG+   G+  L +L  +  E +++S     +  T  +      P        P R   SL +G       LG+  L Q+  L +L+  GR  VS++V Q  S LYP  T  LKDI +NY+SL G+DKW L SI+LLV R VL +  ++ + +K++++  L+  WG ++ VL  L+KL++V S L+ AVR+PS N+ E  +L   ARD VGVY+++LGR G R T+HS LH   AI  HG +PDAS+GE AHQ NK  NKS+ GRNP +HY++R N + AM A  + + ++V  ++ + ++H +     G GC  ++  L   L  G    PTD+ A  TPT +Q +GQFPG+A WS+ L+K  D+   D+G W  R+S G  RPDEA L+A Y  +FGC     C + RCP+CW +   L+   +ECSR    A + AS G GR KGGDV+A+AR
Sbjct:  404 VFVRGGLLMWCGDGPGRAKVLGSKACNHFSRFPCPYCMVEQRDN-ITGGDLGNAQYDIDAHRRTWGQITAGFDTLKSLADNPAEHSRQSMVYWGLLRTPTAP-----PCPCTTQCSPSRPRWSLWSGCTSMPCDLGSCQLCQVSCLEMLSTQGRRLVSAVVAQNPSLLYPAGTERLKDIVTNYSSLTGSDKWTLQSIMLLVFRPVLANVGAMKKNMKRQDIAELRDVWGTDEKVLEVLQKLIEVASHLSCAVRAPSHNDLELAQLDLLARDVVGVYSKVLGRTGSRPTIHSVLHTSQAIRAHGIVPDASSGEFAHQQNKSGNKSDCGRNPPKHYIKRANTNAAMLALANGLEYRVRKYNFSKQEHEIVPVSPGAGCIRLMSLLARTL--GHDRVPTDVHATETPTTAQLKGQFPGSAIWSAHLYKDNDVQV-DDGSWSARVSGGNFRPDEAALIAQYNVFFGCGGDEQCSNLRCPSCWDEEDTLESSLLECSRHMRVAQV-ASCGQGRLKGGDVKAAAR 912          
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Match: A0A6H5K575_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K575_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 9.860e-107
Identity = 282/724 (38.95%), Postives = 357/724 (49.31%), Query Frame = 1
Query:  898 CPQVSSF*GYAGGAVDHSPNPLRRQGF*RG*NRERYRQAFLQPKAA--PPLEVVETMVPTAKDDGSSVPVYDIPCNLLLNRKLQSPLSSRHVSKMLGVRF*TTRKPRKAG*AAAIFSRFRRSQ-----QAMPSART-------------CTATSQEVPLFSGSMACWEQEPEIARFTSAMSRCLPFPTVARTHVDCAKCSGARRKEPCC*PSDVSARKTKC----ATLRGPSAARVSFVCGRKRDRLPTWF*AARLFRTCARFIPEMRCQHRCT*RNRGMEGCVGPTGMLSLGRALS*SDVSAGGRTGTLGLPSCLLNRPPPGLGRGPETTQFLAFGNRGFAKCQQSELRKHPALCLQRRLQRLGDEEQAFCGSNVCRLGLDQ*RFPAKAIGDVARHHCFAG---RMC*GR--DVAASKCHGGTSARVFLRGGPLTWVSDSPQRAKTLYTKHPNNSTNLPCPYCKARQDEHHPTCGDLGNSKYNIAANRRTWGEAQDGWSELMALESDRVEQTQRSKELGMVAPTSISSGVLGRPLWDKMYLDPRRHV--ESLHAGALGAQALVQLFFLALLNEAGREAVSSIVRQGSTLYPPATAPLKDICSNYTSLKGTDKWLLGSILLLVARCVLHDTTSLGRYLKQRELHALKATWGGEQAVLVQLRKLVQV*SALTYAVRSPSFNEAERNKLMKHARDSVGVYAELLGRGGVRTTVHSALHYVDAIEDH 2976
            CPQV S  G+  G++ +S      +GF     R    + F   +    P LEVVET VP++KD+G+SVPVYDIPCNLL+NRK+QSP      ++       +  +P     + ++  R  R+        +  ART               +    VP+    +  W  + E   F  A+ R        RT  +     G  R E      +     +K      T+R            R       W    R +     F+ E     R   R +G      P  + S          ++  R GT   P   + +      +     + L F +  F     +      ++ +QRR         A  G+ V      +    A  +G++ R  C A    R   GR  DV AS         +FL GGPL+WVSD PQ AK LY KHPNNST LPCPYCKA QDE  PTCGDLGN++Y++ ANRRTWGEAQDGW EL AL+     QT+RS ELG+VAPT +S GVLGRPLWDK++++P RHV  ESLHA ALGAQALVQ+FFLALLNEAGR  +SSI                                                     Y+K REL ALK TWGGEQAVL QLRKL+QV  ALT+AV SPSF++AER KLM+HARD+VGV+AELLGRGGVR TVHSALHYV AIEDH
Sbjct:  138 CPQVPSIGGHVDGSIGYSRTRHNLKGFDVDDIRHITAKHFYGRRRDHHPLLEVVETFVPSSKDNGTSVPVYDIPCNLLVNRKIQSPSFIETCAEFGRNHLFSVPEPAGNALSTSMHGRLARNSPFFGFDGLLGARTGNRKVYVNDVVMVTMSDGNTVPV---RLLEWYWDMEQGTFLVAVRR-------FRTRNEVRDVQGGERIEGLVRVWEEEGTSSKVIVHSTTIRDLCEIYTREEVSRSMHLEDEWEGGVR-WAVWDAFVGEGFIVKRQKRRRQGDSFRSPPPFVESS---------ASWAREGTGDEPLFGIRKKDFRYNK-----KNLVFASIPFCVFNDAFNAWSMSIKVQRRRSETLLGTTASPGAWV----EGEISLQASVMGELQRG-CEATAIVRAADGRVLDVEASA--------IFLHGGPLSWVSDLPQIAKILYCKHPNNSTKLPCPYCKAEQDERLPTCGDLGNARYDVEANRRTWGEAQDGWRELQALDLAPNGQTKRSAELGIVAPTGVSGGVLGRPLWDKVFINPARHVPVESLHADALGAQALVQVFFLALLNEAGRGVISSIKE---------------------------------------------------YVKPRELQALKDTWGGEQAVLAQLRKLLQVAYALTFAVCSPSFDKAERKKLMEHARDTVGVHAELLGRGGVRATVHSALHYVPAIEDH 772          
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Match: A0A6H5KWG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG2_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 2.490e-86
Identity = 137/180 (76.11%), Postives = 154/180 (85.56%), Query Frame = 1
Query: 2089 RVFLRGGPLTWVSDSPQRAKTLYTKHPNNSTNLPCPYCKARQDEHHPTCGDLGNSKYNIAANRRTWGEAQDGWSELMALESDRVEQTQRSKELGMVAPTSISSGVLGRPLWDKMYLDPRRHV--ESLHAGALGAQALVQLFFLALLNEAGREAVSSIVRQGSTLYPPATAPLKDICSNYT 2622
            ++FLRGGPLTWVSDSPQRAK LY KHPNNST LPCPYCKA QDE  PTCGDLGN++Y++ ANRRTWGEAQDGW EL  L+    EQT+RS EL +VAPT +S GVLGRPLWDK +++P RHV  ESLHA ALGAQALVQ FFLAL+NEAGR  +SSIVRQGSTLYPPATAPLKDIC+NY+
Sbjct:    6 KIFLRGGPLTWVSDSPQRAKPLYCKHPNNSTKLPCPYCKAEQDERLPTCGDLGNARYDVEANRRTWGEAQDGWRELQGLDLAPNEQTKRSAELEIVAPTGVSGGVLGRPLWDKAFVNPARHVPVESLHAYALGAQALVQFFFLALMNEAGRGVISSIVRQGSTLYPPATAPLKDICTNYS 185          
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Match: A0A6H5J9J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J8_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 7.320e-86
Identity = 152/208 (73.08%), Postives = 171/208 (82.21%), Query Frame = 1
Query: 2713 YLKQRELHALKATWGGEQAVLVQLRKLVQV*SALTYAVRSPSFNEAERNKLMKHARDSVGVYAELLGRGGVRTTVHSALHYVDAIEDHGR-----MPDASTGEAAHQMNKKVNKSNSGRNPAQHYVRRFNMDFAMSAPVDRIPWKVTTFDRTLKQHVVSYTRAGPGCSAVLRALGDVLPGGLSSAPTDIRAASTPTESQRRGQFPGAA 3321
            Y+K REL ALK TWGGEQAVL QLRKL+QV SALT+AVRSPSF++AER KLM+HARD+VGVYAELLGRGGVRTTVHSALHYV A EDHG      MPDASTGEAAHQ +KKVN SNSGRN A H+ RRFNMD A+ A  +  P +VT FDR LK++V+   +AG GCSAVLR+LGDVLPGGLSSAPTD RAAS PT +QR  QFPGA+
Sbjct:   35 YVKPRELQALKDTWGGEQAVLAQLRKLLQVASALTFAVRSPSFDKAERKKLMEHARDTVGVYAELLGRGGVRTTVHSALHYVQAYEDHGELRECHMPDASTGEAAHQRDKKVNHSNSGRNAAAHFARRFNMDLAIDALAEETPRQVTRFDRRLKKYVMETVKAGSGCSAVLRSLGDVLPGGLSSAPTDARAASIPTAAQRAAQFPGAS 242          
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Match: A0A6H5K5N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5N2_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 3.390e-85
Identity = 202/507 (39.84%), Postives = 278/507 (54.83%), Query Frame = 1
Query: 2128 DSPQRAKTLYTKHPNNSTNLPCPYCKARQDEHHPTCGDLGNSKYNIAANRRTWGEAQDGWSELMALESDRVEQTQRSKELGMVAPTSISSGVLGRPLWDKMYLDPRRHV--ESLHAGALGAQALVQLFFLALLNEAGREAVSSIVRQG-STLYPPATAPLKDICSNYTSLKGTDKWLLGSILLLVARCVLHDTTSLGRYLKQRELHALKATWGGEQAVLVQLRKLVQV*SALTYAVRSPSFNEAERNKLMKHARDSVGVYAELLGRGGVRTTVHSALHYVDAIEDHGRMPDASTGEAAHQMNKKVNKSNSGRNPAQHYVRRFNMDFAMSAPVDRIPWKVTTFDRTLKQHVVSYTRAGPGCSAVLRALGDVLPGGLSSAPTDIRAASTPTESQRRGQFPGAAKWSSVLWKAGDLAGGDEGGWEERLSTGPIRPDEATLLAAYRTYFGCDPGSACLDDRCPNCWIDSSALDKQGIECSRFKHGAPLRASSGLGRWKGGDVRASARAARR 3639
            D   R+K L TK PNN +  PC YC   Q +   T GDLGN +++I  +RRTWG+  +G SEL AL     EQ +RS++LG+V P +  SG L  PL+  M + P  +V  E LH  ALG   L Q+FFL +L+ AGR  VS+I+ Q  S LYPP T  LKD+ +NY SL G+DKW L SI+LLV   VL D +            A+ +T+         LR+L +  S L++A+R+PSF E E  +L K ARD+V +                              PDASTGE  HQ+NK     + GR  A H   R N++ A  A  + +P++ T ++R  + H +   + G GC  ++++L   L  G   APTD  A +  T ++  GQ+PG+A W++ L+  GD    D G W  RL++   RPDE TLL AYRTY+GC     C   RCP+CW D   L +  I+ SR+    P+ AS GLGR KGGDV+++A+A  R
Sbjct:    4 DGQGRSKFLGTKPPNNWSKHPCAYCMVSQRDD-DTGGDLGNPRFDIDKHRRTWGQITNGLSELDALADVPHEQDRRSRDLGLVPPDA--SG-LPLPLYTAMRIAPTENVPVERLHFDALGQSQLCQVFFLEMLSTAGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIMLLVFWMVLQDVS------------AMISTFCSA------LRELRKRSSLLSFALRAPSFTEPELRQLDKLARDAVRI-----------------------------CPDASTGEHTHQVNKSGRGVDCGRRAALHMALRANVNSAFLALSNGLPYRGTRYNRQNRTHEIVTVQPGDGCVRLMQSLASSL--GHDRAPTDNHAEADQTPAELSGQYPGSAVWTASLFNNGDEQQLD-GEWRTRLASSKFRPDEQTLLRAYRTYYGCGMAGPCSSSRCPDCW-DGDTLQQVSIDSSRYTR-VPMVASCGLGRLKGGDVKSAAQAGPR 454          
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Match: A0A6H5K953_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K953_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 1.510e-84
Identity = 203/521 (38.96%), Postives = 272/521 (52.21%), Query Frame = 1
Query: 2164 HPNNSTNLPCPYCKARQDE-HHPTCGDLGNSKYNIAANRRTWGEAQDGWSELMALESDRVEQTQRSKELGMVAPTSISSGVLGRPLWD-KMYLDPR--RHVESLHAGALGAQALVQLFFLALLNEAGREAVSSIVRQGSTLYPPATAPLKDICSNYTSLKGTDKWLLGSILLLVARCVLHDTTSLGRYLKQRELHALKA-TWG--GEQAVLVQLRKLVQV*SALTYAVRSPSFNEAERNKLMKHARDSVGVYAELLGRGGVRTTVHSALHYVDAIEDHGRMPDASTGEAAHQMNKKVNKSNSGRNPAQHYVRRFNMDFAMSAPVDRIPWKVTTFDRTLKQHVVSYTRAGPGCSAVLRALGDVLPGGLSSAPTDIRAASTPTESQRRGQFPGAAKWSSVLWKAGDLAGGDEGG----------WEERLSTGPIRPDEATLLAAYRTYFGCDPGSACLDD----RCPNCWIDS-SALDKQGIECSRFKHGAPLRASSGLGRWKGGDVRASARAARRVTGTWPR 3660
            +P + T +PC  C  RQ      T GDLG+  ++I   RR  GE + G SEL  L     +    SK+LG+V P   S  V  R LWD   +  P      E LH   L     VQ FFL LL+ AGR  V+ +VRQ   LY P   PLKD   +YT   G+ K L GS+ L+V R +L    ++  YL    L A     WG   ++ VL +LR+ +Q  SALT+A R   F++++  +L   A D V      LGR GV+TT+H  LH  ++I  HGR  DA+ GEA HQ +K+  KS+S R+PA H+ RR N   A+       P+    +  + K  V     +GPGC  +L ALGD L GGL+    D  A++TPT S + G++ G+AKW + +   GDLA  ++GG          WE  +S GP+RP    +L A   +F C      LDD    RCP CW     +L  + I CSRFKHG P + SSGLGR+KGGDV+ +       TG  PR
Sbjct:  307 NPTSKTEVPCGNCAVRQSNVEGETGGDLGDRNFDIVKYRRKRGEVELGRSELEKLGFGTPQAVALSKKLGIVEPHP-SMRVQPRLLWDLTSHHSPMVSEGPELLHLDFLNHLGGVQTFFLGLLSPAGRAHVTGVVRQRGGLYGPGALPLKDPIKDYTGYTGSHKGLFGSVQLIVFRGLLASVGAMRHYLSSNALRAQNIEVWGRLNDEGVLDRLRQYLQASSALTFAARGQVFSDSDLVELHVRAGDMVENSKLTLGREGVKTTMHQWLHVAESIRAHGRPQDANVGEAGHQTHKRSRKSSSNRDPAAHHARRTNTFLALHRLTSPEPYTANRYSYSSKTKVTEQVTSGPGCRRILAALGDRLRGGLNGV-VDADASTTPTASMKDGKYQGSAKWQATILGGGDLACSEDGGGSVAAGAKEPWEVCVSEGPVRPHAGAILRANAEWFSCGRSDGALDDCADARCPLCWEGGHESLKARNISCSRFKHGVPPKTSSGLGRFKGGDVKKAT-----ATGPTPR 820          
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Match: A0A6H5K1N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N3_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 4.640e-82
Identity = 142/215 (66.05%), Postives = 165/215 (76.74%), Query Frame = 1
Query: 2983 MPDASTGEAAHQMNKKVNKSNSGRNPAQHYVRRFNMDFAMSAPVDRIPWKVTTFDRTLKQHVVSYTRAGPGCSAVLRALGDVLPGGLSSAPTDIRAASTPTESQRRGQFPGAAKWSSVLWKAGDLAGGDEGG--WEERLSTGPIRPDEATLLAAYRTYFGC---DPGSACLDDRCPNCWIDSSALDKQGIECSRFKHGAPLRASSGLGRWKGGDV 3612
            MPDASTGEAAHQ NKKVN SNSGRN A HY RRFNMD A+ A  + I W+VT FDR LK++VV   +AG GCSAVLR+LGDVLPGGL SAPTD RAASTPT +QR   FPGAA W++VLW+A      D GG  WE R++TGP+RPDE TL+ AY TYF C   D G+ C + RC +CW++SS LD + I C+RFKHGAPLRASSGLGRWKGGD+
Sbjct:  140 MPDASTGEAAHQRNKKVNHSNSGRNAAAHYARRFNMDLAIDALAEEISWEVTRFDRRLKKYVVETVKAGSGCSAVLRSLGDVLPGGLPSAPTDARAASTPTAAQRAAHFPGAASWTTVLWEAESPRRNDAGGGGWESRIATGPLRPDERTLIGAYNTYFSCGRADGGALCEEPRCTDCWLNSSTLDDKDIVCTRFKHGAPLRASSGLGRWKGGDL 354          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWQ6_9PHAE3.560e-17061.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLQ7_9PHAE8.870e-12244.34Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9M0_9PHAE8.260e-11443.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9E1_9PHAE4.690e-10842.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K575_9PHAE9.860e-10738.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWG2_9PHAE2.490e-8676.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9J8_9PHAE7.320e-8673.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5N2_9PHAE3.390e-8539.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K953_9PHAE1.510e-8438.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1N3_9PHAE4.640e-8266.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:3311003..3318678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size4659
Cds size930
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15366.1prot_P-fluviatile_contig9.15366.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 3312311..3314233 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817350.4489527-UTR-P-fluviatile_contig9:3311002..33114891622817350.4489527-UTR-P-fluviatile_contig9:3311002..3311489Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3311003..3311489 -
1693572186.3479066-UTR-P-fluviatile_contig9:3311002..33114891693572186.3479066-UTR-P-fluviatile_contig9:3311002..3311489Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3311003..3311489 -
1622817350.4609885-UTR-P-fluviatile_contig9:3311933..33123101622817350.4609885-UTR-P-fluviatile_contig9:3311933..3312310Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3311934..3312310 -
1693572186.3563209-UTR-P-fluviatile_contig9:3311933..33123101693572186.3563209-UTR-P-fluviatile_contig9:3311933..3312310Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3311934..3312310 -
1622817350.5045366-UTR-P-fluviatile_contig9:3314233..33143921622817350.5045366-UTR-P-fluviatile_contig9:3314233..3314392Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3314234..3314392 -
1693572186.6076531-UTR-P-fluviatile_contig9:3314233..33143921693572186.6076531-UTR-P-fluviatile_contig9:3314233..3314392Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3314234..3314392 -
1622817350.5154042-UTR-P-fluviatile_contig9:3314773..33150011622817350.5154042-UTR-P-fluviatile_contig9:3314773..3315001Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3314774..3315001 -
1693572186.618439-UTR-P-fluviatile_contig9:3314773..33150011693572186.618439-UTR-P-fluviatile_contig9:3314773..3315001Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3314774..3315001 -
1622817350.5267549-UTR-P-fluviatile_contig9:3315384..33157711622817350.5267549-UTR-P-fluviatile_contig9:3315384..3315771Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3315385..3315771 -
1693572186.6283994-UTR-P-fluviatile_contig9:3315384..33157711693572186.6283994-UTR-P-fluviatile_contig9:3315384..3315771Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3315385..3315771 -
1622817350.5435712-UTR-P-fluviatile_contig9:3316381..33165391622817350.5435712-UTR-P-fluviatile_contig9:3316381..3316539Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3316382..3316539 -
1693572186.6383212-UTR-P-fluviatile_contig9:3316381..33165391693572186.6383212-UTR-P-fluviatile_contig9:3316381..3316539Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3316382..3316539 -
1622817350.556216-UTR-P-fluviatile_contig9:3316745..33186781622817350.556216-UTR-P-fluviatile_contig9:3316745..3318678Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3316746..3318678 -
1693572186.6508737-UTR-P-fluviatile_contig9:3316745..33186781693572186.6508737-UTR-P-fluviatile_contig9:3316745..3318678Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 3316746..3318678 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817350.4726882-CDS-P-fluviatile_contig9:3312310..33131281622817350.4726882-CDS-P-fluviatile_contig9:3312310..3313128Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 3312311..3313128 -
1693572186.3646235-CDS-P-fluviatile_contig9:3312310..33131281693572186.3646235-CDS-P-fluviatile_contig9:3312310..3313128Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 3312311..3313128 -
1622817350.4847133-CDS-P-fluviatile_contig9:3313601..33136921622817350.4847133-CDS-P-fluviatile_contig9:3313601..3313692Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 3313602..3313692 -
1693572186.3729134-CDS-P-fluviatile_contig9:3313601..33136921693572186.3729134-CDS-P-fluviatile_contig9:3313601..3313692Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 3313602..3313692 -
1622817350.4946322-CDS-P-fluviatile_contig9:3314212..33142331622817350.4946322-CDS-P-fluviatile_contig9:3314212..3314233Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 3314213..3314233 -
1693572186.5909154-CDS-P-fluviatile_contig9:3314212..33142331693572186.5909154-CDS-P-fluviatile_contig9:3314212..3314233Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 3314213..3314233 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15366.1

>prot_P-fluviatile_contig9.15366.1 ID=prot_P-fluviatile_contig9.15366.1|Name=mRNA_P-fluviatile_contig9.15366.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=310bp
MKHARDSVGVYAELLGRGGVRTTVHSALHYVDAIEDHGRMPDASTGEAAH
QMNKKVNKSNSGRNPAQHYVRRFNMDFAMSAPVDRIPWKVTTFDRTLKQH
VVSYTRAGPGCSAVLRALGDVLPGGLSSAPTDIRAASTPTESQRRGQFPG
AAKWSSVLWKAGDLAGGDEGGWEERLSTGPIRPDEATLLAAYRTYFGCDP
GSACLDDRCPNCWIDSSALDKQGIECSRFKHGAPLRASSGLGRWKGGDVR
ASARAARRVTGTWPRGVGRTWSSSRGSPSTAVEPHVCKTSRWRASCTSSS
TGGTSGWES*
back to top

mRNA from alignment at P-fluviatile_contig9:3311003..3318678-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15366.1 ID=mRNA_P-fluviatile_contig9.15366.1|Name=mRNA_P-fluviatile_contig9.15366.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7676bp|location=Sequence derived from alignment at P-fluviatile_contig9:3311003..3318678- (Porterinema fluviatile SAG_2381)
GACCGCTCTCGTCCTCGGCGCAGGGCAGCAGACCTTCTCACTTGGCGGAC GCTGGTGCTGGTTCGTCTGCCAGATCGGAAGAAGGTGAGACAGGATACGG TGTGTTGTTGAACGCACTGATTCGCTTTTTCAAATCGAGGCTATATATAT ATCTCCCGCCTGCCTCCCTGCTGCCCTGTGAGGGAGGTCGCTCGACAAAT ACTAATAGGTCGCACAACGCTGGACGGGTGCACCCCTTGACCCCGCAGAA TTCCGGAGCCGAGAGCCATCATCTCCGTGCCGCAGCCGAGAAACGATTGC AACGGCGCTTTATCTCATTCTGTGTCTTTGTGTCCGGGGTTGGGGAATGC GGATACGCCGCGACCTCTGCTCCAAATGCAGATCGCCGCCTTGATGCCCC TCGCGCGCGTGCGACGGCGGCACCGTTGAAAGCGATGGACACCGATTTGT TCAGCGAGGGCGGGCCAGGCCTCGAGGCACCATCATTGCGTGCCGATGAG GATGCTGTTCTTTTCCTGGATGAACCATCTCCCCCGCCCTCCCCAACTCT TCTCGAGAGGCTCCACGAGCTCGCTGTTGACGACCCAAACGAACCGCTGT TTAGCGACGACGATGGCGAGCCGTTAGGTGCCGAAAGTCAATGGGCGAAC GGGTAGTATGACGACGATGACTCGGGATCTGCAGGAGATGGGAGGGATCC GTCACCCCAAAACGATGGTTGTGGTCCGCCGCTCGGTGCCGTTGACGACC ACAAGACGAAACGCCTCGACAAATACATGTCGGTCTAGGTGGAAGGATCA TGGAAGGGGGGGTTCAGTTCTGTTCTCTCAACACAAAGGCGAAGGGCTCT CCCTTTTACCCGTACGAGAACCTTTCGATCATGGTGCCCTTTCAATTTGT CCACAAGTATCAAGTTTCTGAGGCTATGCTGGAGGGGCTGTTGACCATTC TCCGAACCCGTTACGACGGCAAGGGTTTTGACGTGGGTGAAATCGAGAGC GTTACCGCCAAGCATTTTTACAACCGAAGGCGGCCCCACCACTGGAGGTT GTTGAGACGATGGTACCCACTGCAAAGGACGACGGATCATCGGTGCCCGT CTACGATATCCCATGCAACTTGCTTCTCAATCGCAAGCTGCAATCCCCAC TTTCATCAAGGCATGTGTCGAAAATGCTGGGGGTAAGGTTTTGAACGACG CGGAAGCCGAGGAAAGCGGGTTGAGCAGCAGCCATATTTTCTCGGTTCCG ACGGAGCCAACAGGCAATGCCCTCAGCACGAACATGCACGGCAACCTCGC AAGAAGTTCCGCTTTTTTCGGGTTCGATGGCCTGTTGGGAACAAGAACCG GAGATCGCAAGGTTTACATCGGCGATGTCGCGATGTTTGCCCTTCCCGAC GGTAGCACGCACCCATGTCGACTGCGCGAAATGTTCTGGGGCGAGGAGGA AGGAGCCTTGTTGTTGACCGTCAGACGTTTCCGCAAGAAAGACGAAGTGC GCGACGTTGAGGGGGCCGAGCGCTGCGAGGGTCTCGTTCGTGTGTGGGAG GAAGCGGGATCGGCTTCCAACATGGTTTTAAGCAGCAAGACTCTTCAGGA CGTGTGCGAGATTTATACCCGAGATGAGGTGTCAGCATCGGTGCACTTGA AGGAACCGTGGGATGGAGGGGTGCGTTGGGCCGACTGGGATGCTTTCGTT GGGGAGGGCTTTGTCGTGAAGCGACGTAAGCGCAGGCGGCAGGACGGGGA CTCTCGGCCTGCCCTCGTGTTTGTTGAATCGTCCACCCCCTGGTCTAGGC AGGGGACCAGAAACGACCCAATTTTTGGCATTCGGGAACCGGGGTTTCGC CAAATGTCAACAATCTGAACTTCGCAAGCATCCCGCTCTGTGTCTTCAAC GACGCCTTCAACGCTTGGGAGATGAAGAACAAGGCGAGTGCATATCCGCT CCCTGCATTACATGCACGTGTTGTATTGTCGTCCGCGCTTTTCTGCAGGA GTAAACTCCGTTCCTTTATGCAACCCCCTCTCGCCGCCCCTCCCGCCCGC GCTGTCTCGTCTCTTCTGTCGGTGCCGCGCTCGATCGACACTACGAACAA ATATGCTCGCCGGCTCTCGCGCTCTCGTCCATGCACCAGCATTCTGTGGG AGCAACGTATGCCGGCTGGGCCTGGACCAGTAACGATTTCCAGCGAAGGC GATCGGAGACGTTGCTCGGCACCATTGCTTCGCCGGGCGCATGTGTTGAG GGCGAGATGTCGCTGCAAGCAAGTGTCATGGGGGAACTTCAGCGAGGGTG TGAGGGCACCGTCAGAATACGGGGGGCGGACGGCAGGATTCTCAACGTCG AGTTGATGGCGTTGCTTCGAGAAGCCTGGGACGTTTTTTTTCTTGGTGTG CAGAGTCTACAACACCGGGCAAATAAGAGATTTCGAAGTGTAGACGGGAA GGATGAACGAGAGTCGGGGGGCTTGTGCCGCCCATGCCGCGTGCCCGCTG CTCTCTCACATTGTCGTGTGTCGTCGCCGTTGCGGAACCCGTTGCCCTCT GCGTGCTCTTGTTAATCTCGTTTTTTGCTCGAGTGTCACACCACAAGAAA TCTTCGCTTTGACCCCCTGGGTGCGTAGTCAACGTACAGCCACCAGTTTT TAGGCCGACAGTAGGTGCTGGGGATGGAACCTCCTTCGTCTTCGAAATCA CCCCCCCCCCCCCCACTCCGTCCCTCGCCTGCTGTTGCCGAAATGACCTC CCAATCCGGTGCCCTCACCCCCCAACCACTTGCATGTTGAGCAGCACGCC TTTTACCGAGCAGATGGCTCCGATGAGATGAATCGCAAGTCTCTACTCCC CGCCCGCTCGCCCCCCTCCGCACTTGTACCGTCACCCCCCTTCCATGCGC TGCACAGGTGTTTCTTCGCGGAGGACCGCTGACCTGGGTGTCGGATTCAC CGCAGCGCGCCAAGACCCTTTACACCAAGCACCCCAACAACTCCACCAAC CTGCCGTGCCCGTATTGTAAGGCACGGCAAGACGAACACCACCCAACCTG CGGCGACCTCGGAAACAGCAAGTACAACATTGCAGCGAACAGGCGGACGT GGGGGGAGGCACAAGACGGTTGGAGCGAGTTGATGGCGCTGGAGTCCGAC CGCGTCGAGCAGACGCAGCGCTCTAAGGAGCTGGGAATGGTGGCCCCAAC GAGCATCAGCAGCGGTGTCCTCGGGCGGCCGCTTTGGGACAAGATGTACC TCGACCCGCGGCGGCACGTCGAGAGCCTGCATGCCGGTGCCTTGGTAAGT TCTTGTACAACCACACTCGTCCGTTCTGTTGCAAATCCATTCGCAGAGTG CTTGAGTCTCACGAAAGCGCATTCACGCAAGTTGTACTCTCCCGTGTTGC GGGGCGAGGGCCGATAAAGGTTTCAGCCAACGCGCAACGGCATCTTCTTT TCGTTCATCCAGAATTGGGTGCAAGCTCGTACGAGAATATACAATGCTTT CGCCGTGCACCTTCCCTGCGAGAACTGATCGATACTTGACCGCGCCGATC GGTATTCATTTTCTGCGCAAGACGGGGTAGCCCGCCCCAGTGGCCGCTAG ATTTTTGACGTGCTTTCCCATCGGGGGCCCCGCGGCCGGTCCCCGCTTTC GCGCTCTTTTGTATGACATGGATGCAGGGAGCGCAGGCATTGGTTCAGTT ATTTTTCCTGGCCCTCCTAAACGAAGCTGGTCGGGAAGCGGTCTCGTCCA TCGTTCGACAGGGGAGCACGCTTTACCCCCCGGCGACGGCACCACTGAAG GACATCTGCAGCAACTACACCTCCTTGAAGGGCACCGACAAGTGGCTCCT CGGATCCATCCTCCTGCTCGTGGCCCGCTGCGTTCTCCACGACACAACAT CGTTGGTACTTTTCTCATGCGTCACACCATTTGCTTTCGTTCCACTGCTT GCAAGTTTTGAACAAGTGGGGTGCAATCACTCCTCTTCCTCACCATTCAC TATTTTACCGAGTGTGTTCGACTTCAGATGCCCTACGTGCGTGGAATTCC CCTCGAAGGCCTTGATGCGGACATGTGTTTTTTGAAAAGACTTGCGCGAA AGTTTATTTCGCACAGTACAGGACTGGGCTCGGCCTCTCACGCTCACGCA ATGTTCCTCGCACGTGTCGAGCGTTGAAAACATGTCTTCGATAGAACGGA AAGTAGAACCGCGATCCTCACTCTTTCCGAAGCTCACCAATTATCTTTCT GTTTCTCATGTGCCCAATCACGTTTCCCTTGTCCAGGGGCGATACTTGAA GCAGCGAGAGCTGCACGCCCTGAAGGCCACCTGGGGGGGGGAGCAAGCGG TGTTGGTGCAGCTGAGGAAGTTGGTCCAGGTCTAATCGGCTCTCACGTAC GCGGTACGCTCGCCCTCCTTCAACGAGGCGGAGCGAAACAAGCTCATGAA GCACGCAAGGGACTCGGTGAGCGCAAGACATGCTCCCCCCTCTGCACCCT ACCCTTCCCCCGTCTCTCGTTTGTCGGGCCTTAATTGTGCGGCGGTACTT TATTTTTGCTTCGAAAGGGCTGCCAACCCCTCGCTTTTGTGTGTGCAGGG ATAGAGGGAGTCAAGCGTTTTGGAAGATGGTACTGGAGCGTTACATGAAT CCCTGATGGCGCCGTCAATATTTTGGGAAGGGGGCGAGCGGGGCTCTACT CTCAGACCCATACCGTGTTTGATCGCCCGCAACACGTTCGCTCCTTTGAA AGGCTTCAAAATTTTGGCGTGCCGGCGTCGCCGCGTTTGTCTTGCTTGTA TTTGAAAATAAGTATATCATCGCTTTTGTTCGACGTCTTTCCCCCCCCTC TCGCTTCGGTCACGAAATCATTCAGGGCATACCCGTCTCGGATAAAATGA AAGCTGAGGGCCGAAATGTGTGAAAATCTTGCCCGCCTTCTTTTGGCTCC GTGTCTCATTGTGTGGTGTGATTTCTTGCGGTACAGGTGGGCGTCTACGC TGAACTCTTGGGAAGGGGCGGGGTGAGGACAACCGTGCATTCCGCCCTGC ACTACGTGGACGCCATCGAAGACCACGGTGGGTGACGTTCAGTTTTTTTT ATGTGGTCTGTGCCGTCGGAGGTGACTTGCAAGGAGGTTACAGCTTTTGC AGCTGACACATGCGTACTCGTTTTGAGCGTTTTGTTTCACCACTTTGCTC CTGTAAACACGGGGCCCCCTTCCTTCAGGTAGCAAATGACGGACCATTCT GCGTGGAATCAAGTTCGGTAAAAGTCGGGGACTTTTTGTCTTTTTTTTTC ATCCGTTCGGGGGGCCTCGTCGGTCCAACGGCACAGCATCAAAGCCGGGA AGAAGAAATTCAATACAGGCATCCTTGTTTTCACCTTCCCTTTTCTCGGT CTCGACCGCACTACCCTTGTGTCCGGTTTTGCAGCCGGAAGCTGTTCGCA CGTCCTTCTCTTTCGCTTGGTACCGCGTGGCTTGAATTTTCGCGCGTTCT TTCTTTTGTGCTCCGCGCTACGTGTGTCCCGCGTGTGCCTCGTGTGTCAG GCCGCATGCCTGATGCCAGCACAGGCGAAGCTGCGCACCAGATGAACAAG AAGGTCAACAAGTCCAACTCTGGGCGCAATCCTGCGCAGCACTACGTGCG GCGCTTCAACATGGACTTCGCCATGTCCGCCCCCGTCGATAGGATCCCGT GGAAGGTTACCACCTTCGACCGAACCTTGAAGCAGCACGTTGTATCGTAT ACCAGGGCAGGACCTGGTTGTTCCGCGGTGTTGCGAGCTTTGGGCGATGT TTTGCCGGGGGGGCTATCTTCCGCCCCGACGGACATTCGCGCAGCGAGCA CACCAACGGAGTCGCAGAGGCGAGGTCAGTTCCCCGGGGCCGCGAAGTGG TCCAGTGTCTTGTGGAAGGCGGGGGACTTGGCGGGAGGCGACGAGGGCGG CTGGGAGGAGCGCCTGTCGACGGGACCTATTCGTCCCGATGAGGCCACCT TGCTGGCTGCCTACCGCACCTACTTTGGCTGCGATCCTGGGTCTGCGTGC CTCGATGATCGCTGCCCCAACTGCTGGATCGACTCGTCCGCGTTGGACAA GCAGGGGATTGAATGCTCACGTTTCAAACACGGTGCCCCTTTGAGAGCGA GCAGCGGCCTGGGGCGGTGGAAAGGGGGGGATGTCAGGGCATCGGCGCGC GCGGCCCGCCGGGTGACTGGTACATGGCCGAGGGGTGTGGGGAGGACGTG GAGTTCTTCAAGGGGCAGCCCTTCGACGGCGGTGGAGCCGCACGTGTGCA AGACCTCTCGCTGGCGCGCATCCTGTACTTCTTCGAGCACAGGGGGAACA AGCGGCTGGGAGTCGTAGAGAGGCCGGCTACAGCATGGGTGCTTGGGTTC GACTTCGTGTCGGACGGGATCGGCAATGAATGCAGGACCGACCCCGCCAC CCTGCATCCTGTGATGATCATGCGAGGGAGAGGGCGTCCGGTGGTGTTTC CTTCAGCCGCGATCAGGCGCCATGTCCACCTGTACCATCGCTGCCCTGGG CCAGACCACCCACACGCCGAGGGAGCCTGGATGTGTGGCCCCGAAGCGAC CGGTCGCAGCGGCGCCAAGGTTTGGCGGCACAAGTTTCGGCTGGCGTCGG ACGGTGCCGAGACTTGCAACCGCTTCCTGTTGAACGAGTTCCACCACAGC ATCAACCGCGACTCCATTGTCTGATGGCCGCCTGTCGCGCAACAGGTGAA CCTCGACCCTCCTTCCCTTTTGCCTCAATGTTTTGCTGCGATCCCATGTA CATAATAGCTGTTTGCTTGTTTTTTGCTTCAGTGGCACCTATCTTGAGAG GACCACGCGAGCGAGAGAGCGGGGGGGGGTTCTTGGCGATTTTTGTTGCG CGATATCTCAAATTTTCTAAATTGCCCGCTTCCGCACGTGTCCGCTTCCG CACGGCAAGCGACACACATTCGGTCGCAACGGGGCAGTCCCCGACGAGGC CTGTGAGGTAGGAGGAGGGGGGGGGGGTAGGACCGTGTCATCCACGGCAG CAGAGCATCTTTTTGCAGACGTGAGCACAAGAGGACGAGAGGTGTGGGTG CCTCGCCGGAATATCTTCCCCTGATCTAATGCAAAACGCCGCTTTTTTCG TTTCTCTGGTTGTATGCGTGTGCTTTTTCCGCACCACAGGCGTGGAAAAT CGCGGAAGCGGCGTCGAGCGGGGACGTGGATTTTATTGGAGCTGAAGGCG GCGGGAGTCGCCGAGCCGGGGCGTAGATTTTGGAGCTGAAGGCGGGAGTC GCCTTCGCGGGGGGAAACATGGCGAGCGACTCTTGAGGATTAGATTACGC GTGTTGCGTGTCAAAAAAAGAAGGAGACTCTCCTTTCTGACTCGGGTGGG GAGAGCATGCGGGAATGATGGAATATTTCGTCAAAAGATTTTGTCTTGTC AAAGAGGAGTCGCGATGCTCGGATGTATCCGGAGGATATTTTTGTTCAGA GCAGATTCTCGCCGTTTTGGTTAAAGCTGCTGATCGGAGATTTGTCTGCG CGGCGCGCGAAGGTTTTGGTTTTCAGCTCTCTCCGCCGCTCGTTTGCTGT CAGAGAACGTCTTCTTTTTTTTCTTCGTTGGTGCATTTTTCACCTTCTCC CTGTGGTGTGGTGGAGCAACCTTTTT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig9:3311003..3318678-

>mRNA_P-fluviatile_contig9.15366.1 ID=mRNA_P-fluviatile_contig9.15366.1|Name=mRNA_P-fluviatile_contig9.15366.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1860bp|location=Sequence derived from alignment at P-fluviatile_contig9:3311003..3318678- (Porterinema fluviatile SAG_2381)
ATGAAGCACGCAAGGGACTCGATGAAGCACGCAAGGGACTCGGTGGGCGT
CTACGCTGAACTCTTGGGAAGGGGCGGGGTGAGGACAACCGTGCATTCCG
CCCTGCACTACGTGGACGCCATCGAAGACCACGGTGGGCGTCTACGCTGA
ACTCTTGGGAAGGGGCGGGGTGAGGACAACCGTGCATTCCGCCCTGCACT
ACGTGGACGCCATCGAAGACCACGGCCGCATGCCTGATGCCAGCACAGGC
GAAGCTGCGCACCAGATGAACAAGAAGGTCAACAAGTCCAACTCTGGGCG
CAATCCTGCGCAGCACTACGTGCGGCGCTTCAACATGGACTTCGCCATGT
CCGCCCCCGTCGATAGGATCCCGTGGAAGGTTACCACCTTCGACCGAACC
TTGAAGCAGCACGTTGTATCGTATACCAGGGCAGGACCTGGTTGTTCCGC
GGTGTTGCGAGCTTTGGGCGATGTTTTGCCGGGGGGGCTATCTTCCGCCC
CGACGGACATTCGCGCAGCGAGCACACCAACGGAGTCGCAGAGGCGAGGT
CAGTTCCCCGGGGCCGCGAAGTGGTCCAGTGTCTTGTGGAAGGCGGGGGA
CTTGGCGGGAGGCGACGAGGGCGGCTGGGAGGAGCGCCTGTCGACGGGAC
CTATTCGTCCCGATGAGGCCACCTTGCTGGCTGCCTACCGCACCTACTTT
GGCTGCGATCCTGGGTCTGCGTGCCTCGATGATCGCTGCCCCAACTGCTG
GATCGACTCGTCCGCGTTGGACAAGCAGGGGATTGAATGCTCACGTTTCA
AACACGGTGCCCCTTTGAGAGCGAGCAGCGGCCTGGGGCGGTGGAAAGGG
GGGGATGTCAGGGCATCGGCGCGCGCGGCCCGCCGGGTGACTGGTACATG
GCCGAGGGGTGTGGGGAGGACGTGGAGTTCTTCAAGGGGCAGCCCTTCGA
CGGCGGTGGAGCCGCACGTGTGCAAGACCTCTCGCTGGCGCGCATCCTGT
ACTTCTTCGAGCACAGGGGGAACAAGCGGCTGGGAGTCGTAGGCCGCATG
CCTGATGCCAGCACAGGCGAAGCTGCGCACCAGATGAACAAGAAGGTCAA
CAAGTCCAACTCTGGGCGCAATCCTGCGCAGCACTACGTGCGGCGCTTCA
ACATGGACTTCGCCATGTCCGCCCCCGTCGATAGGATCCCGTGGAAGGTT
ACCACCTTCGACCGAACCTTGAAGCAGCACGTTGTATCGTATACCAGGGC
AGGACCTGGTTGTTCCGCGGTGTTGCGAGCTTTGGGCGATGTTTTGCCGG
GGGGGCTATCTTCCGCCCCGACGGACATTCGCGCAGCGAGCACACCAACG
GAGTCGCAGAGGCGAGGTCAGTTCCCCGGGGCCGCGAAGTGGTCCAGTGT
CTTGTGGAAGGCGGGGGACTTGGCGGGAGGCGACGAGGGCGGCTGGGAGG
AGCGCCTGTCGACGGGACCTATTCGTCCCGATGAGGCCACCTTGCTGGCT
GCCTACCGCACCTACTTTGGCTGCGATCCTGGGTCTGCGTGCCTCGATGA
TCGCTGCCCCAACTGCTGGATCGACTCGTCCGCGTTGGACAAGCAGGGGA
TTGAATGCTCACGTTTCAAACACGGTGCCCCTTTGAGAGCGAGCAGCGGC
CTGGGGCGGTGGAAAGGGGGGGATGTCAGGGCATCGGCGCGCGCGGCCCG
CCGGGTGACTGGTACATGGCCGAGGGGTGTGGGGAGGACGTGGAGTTCTT
CAAGGGGCAGCCCTTCGACGGCGGTGGAGCCGCACGTGTGCAAGACCTCT
CGCTGGCGCGCATCCTGTACTTCTTCGAGCACAGGGGGAACAAGCGGCTG
GGAGTCGTAG
back to top