mRNA_P-fluviatile_contig9.15340.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15340.1 vs. uniprot
Match: A0A6H5L089_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L089_9PHAE) HSP 1 Score: 156 bits (395), Expect = 2.580e-37 Identity = 83/193 (43.01%), Postives = 122/193 (63.21%), Query Frame = 1
Query: 400 GHGFGDVSVL---RQLIGGNLYSRPPPRLPSDPENEVAWYRDLAYYISDEGLDHTLKEDERIGPVRVIGST-RSELLLEHKERVVADHALAWGIIRAAVAGTDLLDTLLSYSTVPEAWSAVQSWVLPTTDAEQRLLEHELANVEYSPDLPPKYFFARVDAILNTMKLVGIEKTPKQIIDVMMDRLPSEFRVEK 966
G G+ VS+ QL+ G +R PP+ P++P ++W R + +++ EGL+ TL G V +IG R+ L H +V H AWG + + +G+D+ +TL + S VPEAW+A++ W LPTTDAEQRLLE +L VE SP PK FFARVD I+NTM+ VGIEK+ +QI+ ++ +L S++ VE+
Sbjct: 357 GPGYQTVSMADGGSQLMSGRFGTRNPPKHPNEPGKFMSWSRRMRTFLAVEGLEQTLDHQPPTGYVHIIGCPDRNYLNRIHGAPLVTAHLRAWGYLVESTSGSDIEETLFACSCVPEAWTAIREWSLPTTDAEQRLLERQLETVEMSPGENPKLFFARVDGIVNTMRAVGIEKSERQIVQTIVRQLSSDYDVER 549
BLAST of mRNA_P-fluviatile_contig9.15340.1 vs. uniprot
Match: A0A6H5KIP6_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP6_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.930e-34 Identity = 92/267 (34.46%), Postives = 137/267 (51.31%), Query Frame = 1
Query: 355 AGGAVPWRKGSEGTGGHGFGDVSVLRQ-----LIGGNLYSRPPPRLPSDPENEVAWYRDLAYYISDEGLDHTLKEDERIGPVRVIGST-RSELLLEHKERVVADHALAWGIIRAAVAGTDLLDTLLSYSTVPEAWSAVQSWVLPTTDAEQRLLEHELANVEYSPDLPPKYFFARVDAILNTMKLVGIEKTPKQIIDVMMDRLPSEFRVEKVFLKLQPNLTRRMVETMIIDAHAT-ARTERILKGPTAPVAPSEPHTFFLGGVQSGRG 1134
AG R + GG G G V + + G SR PP++P++ V+W R + +++ E L+ TL G V VI R+ L H +VA H AWG + A GTD+ + L + VPEAWS + W+LPT DAE+ LL L +E P PK FFARVD ++N MK VGIEK+ + I+ +++ +L E+ +E+ + P ++R VE ++ A+A + + K AP A +GG+ SG G
Sbjct: 22 AGAMAAGRTTAGAAGGAGLGTQRVSMKNDGNCALSGYSSSRNPPKIPTNSTKAVSWLRRMRNFLAVEDLERTLDHMPSTGYVNVISCLDRTYLNQTHGAHLVAAHQRAWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILADPTISRAKVENVVRAAYANKVMMKELGKAQAAPAA-----AVTVGGLGSGHG 283
BLAST of mRNA_P-fluviatile_contig9.15340.1 vs. uniprot
Match: A0A6H5L4A7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A7_9PHAE) HSP 1 Score: 147 bits (371), Expect = 3.430e-34 Identity = 92/267 (34.46%), Postives = 137/267 (51.31%), Query Frame = 1
Query: 355 AGGAVPWRKGSEGTGGHGFGDVSVLRQ-----LIGGNLYSRPPPRLPSDPENEVAWYRDLAYYISDEGLDHTLKEDERIGPVRVIGST-RSELLLEHKERVVADHALAWGIIRAAVAGTDLLDTLLSYSTVPEAWSAVQSWVLPTTDAEQRLLEHELANVEYSPDLPPKYFFARVDAILNTMKLVGIEKTPKQIIDVMMDRLPSEFRVEKVFLKLQPNLTRRMVETMIIDAHAT-ARTERILKGPTAPVAPSEPHTFFLGGVQSGRG 1134
AG R + GG G G V + + G SR PP++P++ V+W R + +++ E L+ TL G V VI R+ L H +VA H AWG + A GTD+ + L + VPEAWS + W+LPT DAE+ LL L +E P PK FFARVD ++N MK VGIEK+ + I+ +++ +L E+ +E+ + P ++R VE ++ A+A + + K AP A +GG+ SG G
Sbjct: 22 AGAMAAGRTTAGAAGGAGLGTQRVSMKNDGNCALSGYSSSRNPPKIPTNSTKAVSWLRRMRNFLAVEDLERTLDHMPSTGYVNVISCLDRTYLNQTHGAHLVAAHQRAWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILADPTISRAKVENVVRAAYANKVMMKELGKAQAAPAA-----AVTVGGLGSGHG 283
BLAST of mRNA_P-fluviatile_contig9.15340.1 vs. uniprot
Match: A0A6H5KYI1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI1_9PHAE) HSP 1 Score: 147 bits (371), Expect = 5.810e-34 Identity = 92/267 (34.46%), Postives = 137/267 (51.31%), Query Frame = 1
Query: 355 AGGAVPWRKGSEGTGGHGFGDVSVLRQ-----LIGGNLYSRPPPRLPSDPENEVAWYRDLAYYISDEGLDHTLKEDERIGPVRVIGST-RSELLLEHKERVVADHALAWGIIRAAVAGTDLLDTLLSYSTVPEAWSAVQSWVLPTTDAEQRLLEHELANVEYSPDLPPKYFFARVDAILNTMKLVGIEKTPKQIIDVMMDRLPSEFRVEKVFLKLQPNLTRRMVETMIIDAHAT-ARTERILKGPTAPVAPSEPHTFFLGGVQSGRG 1134
AG R + GG G G V + + G SR PP++P++ V+W R + +++ E L+ TL G V VI R+ L H +VA H AWG + A GTD+ + L + VPEAWS + W+LPT DAE+ LL L +E P PK FFARVD ++N MK VGIEK+ + I+ +++ +L E+ +E+ + P ++R VE ++ A+A + + K AP A +GG+ SG G
Sbjct: 22 AGAMAAGRTTAGAAGGAGLGTQRVSMKNDGNCALSGYSSSRNPPKIPTNSTKAVSWLRRMRNFLAVEDLERTLDHMPSTGYVNVISCLDRTYLNQTHGAHLVAAHQRAWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILADPTISRAKVENVVRAAYANKVMMKELGKAQAAPAA-----AVTVGGLGSGHG 283
BLAST of mRNA_P-fluviatile_contig9.15340.1 vs. uniprot
Match: A0A6H5JNE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE4_9PHAE) HSP 1 Score: 144 bits (364), Expect = 2.020e-33 Identity = 87/250 (34.80%), Postives = 130/250 (52.00%), Query Frame = 1
Query: 355 AGGAVPWRKGSEGTGGHGFGDVSVLRQ-----LIGGNLYSRPPPRLPSDPENEVAWYRDLAYYISDEGLDHTLKEDERIGPVRVIGST-RSELLLEHKERVVADHALAWGIIRAAVAGTDLLDTLLSYSTVPEAWSAVQSWVLPTTDAEQRLLEHELANVEYSPDLPPKYFFARVDAILNTMKLVGIEKTPKQIIDVMMDRLPSEFRVEKVFLKLQPNLTRRMVETMIIDAHAT-ARTERILKGPTAPVA 1083
AG R + GG G G V + + G SR PP++P++ V+W R + +++ E L+ TL G V VI R+ L H +VA H AWG + A GTD+ + L + VPEAWS + W+LPT DAE+ LL L +E P PK FFARVD ++N MK VGIEK+ + I+ +++ +L E+ +E+ + P ++R VE ++ A+A + + K AP A
Sbjct: 77 AGAMAAGRTTAGAAGGAGLGTQRVSMKNDGNCALSGYSSSRNPPKIPTNSTKAVSWLRRMRNFLAVEDLERTLDHMPSTGYVNVISCLDRTYLNQTHGAHLVAAHQRAWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILADPTISRAKVENVVRAAYANKVMMKELGKAQAAPAA 326
BLAST of mRNA_P-fluviatile_contig9.15340.1 vs. uniprot
Match: A0A6H5K4K8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4K8_9PHAE) HSP 1 Score: 107 bits (266), Expect = 8.260e-23 Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 1
Query: 679 AVAGTDLLDTLLSYSTVPEAWSAVQSWVLPTTDAEQRLLEHELANVEYSPDLPPKYFFARVDAILNTMKLVGIEKTPKQIIDVMMDRLPSEFRVEKVFLKLQPNLTRRMVETMIIDAHAT-ARTERILKGPTAPVAPSEPHTFFLGGVQSGRG 1134
A GTD+ + L + VPEAWS + W+LPT DAE+ LL L +E P PK FFARVD ++N MK VGIEK+ + I+ +++ +L E+ +E+ + + P ++R VE ++ A+A + + K AP A +GG+ SG G
Sbjct: 4 ATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILVDPTISRAKVENVVRTAYANKVMMKELGKAQAAPAA-----AVTVGGLGSGHG 151
BLAST of mRNA_P-fluviatile_contig9.15340.1 vs. uniprot
Match: A0A6H5JQJ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ2_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.700e-21 Identity = 48/119 (40.34%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 679 AVAGTDLLDTLLSYSTVPEAWSAVQSWVLPTTDAEQRLLEHELANVEYSPDLPPKYFFARVDAILNTMKLVGIEKTPKQIIDVMMDRLPSEFRVEKVFLKLQPNLTRRMVETMIIDAHA 1035
A GTD+ + L + VPEAWS + W+LPT DAE+ LL L +E P PK FFARVD ++N MK VGIEK+ + I+ +++ +L ++ +E+ + P ++R VE ++ A+A
Sbjct: 4 ATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHKYDIERESILADPTISRAKVENVVRAAYA 122
BLAST of mRNA_P-fluviatile_contig9.15340.1 vs. uniprot
Match: A0A6H5JS28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS28_9PHAE) HSP 1 Score: 105 bits (263), Expect = 7.840e-21 Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 1
Query: 679 AVAGTDLLDTLLSYSTVPEAWSAVQSWVLPTTDAEQRLLEHELANVEYSPDLPPKYFFARVDAILNTMKLVGIEKTPKQIIDVMMDRLPSEFRVEKVFLKLQPNLTRRMVETMIIDAHAT-ARTERILKGPTAPVAPSEPHTFFLGGVQSGRG 1134
A GTD+ + L + VPEAWS + W+LPT DAE+ LL L +E P PK FFARVD ++N MK VGIEK+ + I+ +++ +L E+ +E+ + P ++R VE ++ A+A + + K AP A +GG+ SG G
Sbjct: 4 ATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILADPTISRAKVENVVRAAYANKVMMKELGKAQAAPAA-----AVTVGGLGSGHG 151
BLAST of mRNA_P-fluviatile_contig9.15340.1 vs. uniprot
Match: A0A6H5JQ49_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ49_9PHAE) HSP 1 Score: 103 bits (256), Expect = 4.090e-20 Identity = 53/136 (38.97%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 679 AVAGTDLLDTLLSYSTVPEAWSAVQSWVLPTTDAEQRLLEHELANVEYSPDLPPKYFFARVDAILNTMKLVGIEKTPKQIIDVMMDRLPSEFRVEKVFLKLQPNLTRRMVETMIIDAHAT-ARTERILKGPTAPVA 1083
A GTD+ + L + VPEAWS + W+LPT DAE+ LL L +E P PK FFARVD ++N MK VGIEK+ + I+ +++ +L E+ +E+ + P ++R VE ++ A+A + + K AP A
Sbjct: 4 ATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILADPTISRAKVENVVRAAYANKVMMKELGKAQAAPAA 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15340.1 >prot_P-fluviatile_contig9.15340.1 ID=prot_P-fluviatile_contig9.15340.1|Name=mRNA_P-fluviatile_contig9.15340.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=489bp MKQHDELEQRTGLSHENNMHTTAGDQPSAATSSAGGFSAGGGTSGAAGGAback to top mRNA from alignment at P-fluviatile_contig9:3103219..3104901+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15340.1 ID=mRNA_P-fluviatile_contig9.15340.1|Name=mRNA_P-fluviatile_contig9.15340.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1683bp|location=Sequence derived from alignment at P-fluviatile_contig9:3103219..3104901+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:3103219..3104901+ >mRNA_P-fluviatile_contig9.15340.1 ID=mRNA_P-fluviatile_contig9.15340.1|Name=mRNA_P-fluviatile_contig9.15340.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2934bp|location=Sequence derived from alignment at P-fluviatile_contig9:3103219..3104901+ (Porterinema fluviatile SAG_2381)back to top |