mRNA_P-fluviatile_contig9.15323.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15323.1
Unique NamemRNA_P-fluviatile_contig9.15323.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Match: A0A6H5KJT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT5_9PHAE)

HSP 1 Score: 461 bits (1187), Expect = 7.290e-158
Identity = 231/304 (75.99%), Postives = 261/304 (85.86%), Query Frame = 1
Query:    1 CRLIALEALA----NGFLTPLRSFSTSSHGVGITMGVEKEGYVTWLSRKVERARRPPFVKIARARLQKDFAVLLMRSSYQVVDDLDFVAMDDFQKQFFLFRQGEWSDYKENFPRRIKQGDLQDPDYFDFISFAQYASIAEAMRNGRDFFEEKVGAAGDRRTVQRDADFKDNARLPEEHAKRVGDKILAYCTETFAATKLSPTVTQGLSLSELREGVDRIMNILRLNFYQLDYAVTVDLDRRLLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGLGGSTYSTAFSNFDAVHTFRL 900
            CRL+AL ALA     GF+ P    S    G  +    ++EGYV+WL++K+ERARRPPFVKIARARLQ+DFAVLLMR+SYQVVD+LDFV MDDFQKQFFLFRQ EW  YKENFPR IKQGDL DPDYFDFISFAQYAS+AEAMRNGRDFFEEKVGA G++RTVQR ADFKDNARLPEEHA+RVGD+ILAYCTE F +TKL+P VTQG +++ELREG DRIMN+LRLNFY LDYAVT DLDR++LTV+A  PATIWGQQVLAQRRDRP NDFEAK + AYL+ACGL G+TYSTAFS+ DAVHTFRL
Sbjct:    6 CRLLALFALAFASSAGFMVPPTCHSKRGRGHVMMASDQQEGYVSWLTQKIERARRPPFVKIARARLQRDFAVLLMRASYQVVDELDFVPMDDFQKQFFLFRQREWLGYKENFPR-IKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRILAYCTEAFGSTKLAPVVTQGQTVAELREGCDRIMNLLRLNFYTLDYAVTADLDRKVLTVRATAPATIWGQQVLAQRRDRPANDFEAKVISAYLRACGLEGATYSTAFSSLDAVHTFRL 308          
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Match: D8LI96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI96_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 4.110e-122
Identity = 187/263 (71.10%), Postives = 207/263 (78.71%), Query Frame = 1
Query:  112 YVTWLSRKVERARRPPFVKIARARLQKDFAVLLMRSSYQVVDDLDFVAMDDFQKQFFLFRQGEWSDYKENFPRRIKQGDLQDPDYFDFISFAQYASIAEAMRNGRDFFEEKVGAAGDRRTVQRDADFKDNARLPEEHAKRVGDKILAYCTETFAATKLSPTVTQGLSLSELREGVDRIMNILRLNFYQLDYAVTVDLDRRLLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGLGGSTYSTAFSNFDAVHTFRL 900
            YV+WL++K+ERARRPPFVKIARARLQ+DFAVLLMRSSYQVVD+LDFV MDDFQKQFFL RQGEW  YK+NFPR IKQGDL DPDYFDFISFAQYAS+AEAMRNGRDFFEEK                                   AYCTE F +TKL+P V QG +++ELREG DRIMN+LRLNFY LDYAVT DLDR++LTV+A  PATIWGQQVLAQRRDRP NDFEAK + AYL+ACGL G+TYSTAFSN DAVHTFRL
Sbjct:    7 YVSWLTQKIERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKQNFPR-IKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEK-----------------------------------AYCTEAFGSTKLAPVVAQGQTVAELREGCDRIMNLLRLNFYTLDYAVTADLDRKVLTVRATAPATIWGQQVLAQRRDRPANDFEAKVISAYLRACGLEGATYSTAFSNLDAVHTFRL 233          
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Match: A0A836CM91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM91_9STRA)

HSP 1 Score: 285 bits (730), Expect = 1.250e-88
Identity = 151/269 (56.13%), Postives = 192/269 (71.38%), Query Frame = 1
Query:  106 EGYVTWLSRKVERARRPPFVKIARARLQKDFAVLLMRSSYQVVDDLDFVAMDDFQKQFFLFRQGEWSDYKENFPRRIKQGDLQDPDYFDFISFAQYASIAEAMRNGRDFFEEKVGAAGDRRTVQRDADFKDNARLPEEHAKRVGDKILAYCTETFAAT-KLSPTVTQGLSLSELREGVDRIMNILRLNFYQLDYAVTVDLDR---RLLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGLGGSTYSTAFSNFDAVHTFRL 900
            + Y++W+ RK+E +RRPP V I RAR+Q+DFAVLLMRSSY V D+LD+  MD FQ++FFLFRQGEW D+++  P  I QGDL DP+YFDFISFAQYA+IA  MR+ +  F EKVGA G+ +TVQR  +  D+A LP EHA+RVGD+I  Y  ETFA+  +  P V+    LS +  GV+R+M+  RLNF+ +D  V     +    +LTV A  PAT+W QQVLAQRRD PTNDFEAKAV AYL+AC +   TY+T +S  D  HTFRL
Sbjct:   67 QSYLSWVGRKLELSRRPPPVMIPRARIQRDFAVLLMRSSYAVADELDYTPMDGFQREFFLFRQGEWQDFQKQHPG-ILQGDLTDPNYFDFISFAQYATIAAGMRSAQLLFTEKVGADGETQTVQRAPELADDALLPGEHARRVGDRIFTYIMETFASVPEALPQVSVKPPLSIIARGVERVMDKFRLNFFCVDAKVAASTGKDGSAVLTVTARAPATLWSQQVLAQRRDAPTNDFEAKAVAAYLRACQVP-HTYTTTYSGLDVTHTFRL 333          
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Match: A0A7S2V3L1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3L1_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.590e-62
Identity = 119/268 (44.40%), Postives = 174/268 (64.93%), Query Frame = 1
Query:  100 EKEGYVTWLSRKVERARRPPFVKIARARLQKDFAVLLMRSSYQVVDDLDFVAMDDFQKQFFLFRQGEWSDYKENFPRRIKQGDLQDPDYFDFISFAQYASIAEAMRNGR-DFFEEKVGAAGDRRTVQRDADFKDNARLPEEHAKRVGDKILAYCTETFAATKLSPTVTQGLSLSELREGVDRIMNILRLNFYQLDYAVTVDLDRRLLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGLGGSTYSTAFSNFDAVHTFRL 900
            ++E Y +WLS+K+ER  RP  +K+ R R+ +DFAVLLMRSSY V D++DF+ MD+FQKQFFL+R  E+  Y E   R + QGDL DP YFDFISFAQYA+++  M+N     F EK GA G+   +QR  ++ DN  LP  HA+ VGD++L Y + T    KL+P V +  S+  L  G+ + + +++LN + LD+ V   +  + + V+   PA++W QQVL  ++   TNDFEAK + AYL+ CG+    Y T+F+  + VH+F +
Sbjct:   57 QEEDYFSWLSQKIERKSRPKAIKLPRLRIDRDFAVLLMRSSYAVADEMDFIPMDEFQKQFFLYRADEYELYLEE-NRGVTQGDLADPVYFDFISFAQYATLSRFMKNPPGQVFVEKRGAEGEDFVIQRPQEYADNKVLPIVHAQLVGDRMLEYLS-TEKYEKLAPKVPEKPSVETLLSGIVQAVGLMKLNSFMLDFQVK-PVSPKEIEVRLQGPASLWSQQVLRGQQTVLTNDFEAKLICAYLRKCGVK-PVYRTSFTKTEVVHSFSI 320          
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Match: R1CRK3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CRK3_EMIHU)

HSP 1 Score: 193 bits (491), Expect = 4.900e-53
Identity = 116/258 (44.96%), Postives = 154/258 (59.69%), Query Frame = 1
Query:  124 LSRKVERARRPPFVKIARARLQKDFAVLLMRSSYQVVDDLDFVAMDDFQKQFFLFRQGEWSDYKENFPRRIKQGDLQDPDYFDFISFAQYASIAEAMRNGRDFFEEKVGAAGDRRTVQRDADF-KDNARLPEEHAKRVGDKILAYCTETFAATKLSPTVTQGLSLSELREGVDRIMNILRLNFYQLDYAVTVDLDRRLLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGLGGSTYSTAFSNFDAVHTF 894
            L  +  RA  P    + R R+  DFAVLLMR+SY   D+LDF+ MD+FQK+ FL RQ +W  Y++  P  +KQGD+ DP+YFDF+S+ QYA+IA  MR+GR  FEE + A G    V RD    +DNARLP   + RVGDKIL    E +    L+PTV    S + L EGV  +  +   N Y L  +  ++   R   + AI PAT+W QQVL+ R D   NDFEAKA+ AYL+ C +  S Y+T +   + VH F
Sbjct:  105 LREQAVRAAGPRPRSLPRRRIDIDFAVLLMRTSYATADELDFMPMDEFQKRQFLLRQDDWEGYRQPLPP-VKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVARDPALPRDNARLPALLSLRVGDKILDAIAERYPG--LAPTVELRPSRAALLEGVKALAQVFEYNNYLL--SARLEPSERGFQLSAIAPATVWSQQVLSLRGDL-VNDFEAKAIAAYLRRCAVDAS-YTTRYEGSEVVHIF 355          
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Match: A0A7S0ETJ5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ETJ5_9EUKA)

HSP 1 Score: 190 bits (483), Expect = 5.600e-53
Identity = 111/260 (42.69%), Postives = 159/260 (61.15%), Query Frame = 1
Query:  124 LSRKVERARRPPFVK---IARARLQKDFAVLLMRSSYQVVDDLDFVAMDDFQKQFFLFRQGEWSDYKENFPRRIKQGDLQDPDYFDFISFAQYASIAEAMRNGRDFFEEKVGAAGDRRTVQRDADFKDNARLPEEHAKRVGDKILAYCTETFAATKLSPTVTQGLSLSELREGVDRIMNILRLNFYQLDYAVTVDLDRRLLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGLGGSTYSTAFSNFDAVHTF 894
            LSR ++ A  P  VK   + R++L+ DFAVLLMR++Y V D+LD+  MD FQ+  FLFRQ EW  Y+E  P  ++QG L +P YFDFISF QYA+IA  M+  +  F+E + A G    V R  +  ++A LP  H++RVG+ +LA+  + +   K+ P V   L+ + +R+GV  I+NI  +N Y L     ++     + +  + PAT+W Q +L  RRD P NDFEAK V+AYLK CGL  +T ST  +  +  HTF
Sbjct:    8 LSRMLQGAAGPARVKPQVLPRSKLENDFAVLLMRTTYSVADELDYYPMDKFQQDQFLFRQDEWELYREALPG-VQQGFLTEPAYFDFISFVQYATIATTMKEPKMIFDELIDANGTSIVVTRPPELANDALLPMRHSERVGEAVLAWMDDRY--NKIRPKVPSVLTAAAVRDGVQAILNIYEINGYML--LSKLEPTSHGVKITLVAPATLWSQSMLRNRRDLP-NDFEAKTVVAYLKQCGLP-ATVSTNIAGNNVEHTF 260          
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Match: R1DSH8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DSH8_EMIHU)

HSP 1 Score: 193 bits (490), Expect = 2.740e-52
Identity = 115/252 (45.63%), Postives = 152/252 (60.32%), Query Frame = 1
Query:  142 RARRPPFVKIARARLQKDFAVLLMRSSYQVVDDLDFVAMDDFQKQFFLFRQGEWSDYKENFPRRIKQGDLQDPDYFDFISFAQYASIAEAMRNGRDFFEEKVGAAGDRRTVQRDADF-KDNARLPEEHAKRVGDKILAYCTETFAATKLSPTVTQGLSLSELREGVDRIMNILRLNFYQLDYAVTVDLDRRLLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGLGGSTYSTAFSNFDAVHTF 894
            RA  P    + R R+  DFAVLLMR+SY   D+LDF+ MD+FQK+ FL RQ +W  Y++  P  +KQGD+ DP+YFDF+S+ QYA+IA  MR+GR  FEE + A G    V RD    +DNARLP   + RVGDKIL    E +    L+PTV    S + L EGV  +  +   N Y L  +  ++   R   + AI PAT+W QQVL+ R D   NDFEAKA+ AYL+ C +  S Y+T +   + VH F
Sbjct:  166 RAAGPRPRSLPRRRIDIDFAVLLMRTSYATADELDFMPMDEFQKRQFLLRQDDWEGYRQPLPP-VKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVARDPALPRDNARLPALLSLRVGDKILDAIAERYPG--LAPTVELRPSRAALLEGVKALAQVFEYNNYLL--SARLEPSERGFQLSAIAPATVWSQQVLSLRGDL-VNDFEAKAIAAYLRRCAVDAS-YTTRYEGSEVVHIF 410          
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Match: A0A0G4F5D5_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F5D5_VITBC)

HSP 1 Score: 189 bits (481), Expect = 7.480e-52
Identity = 113/272 (41.54%), Postives = 160/272 (58.82%), Query Frame = 1
Query:  124 LSRKVERARRPPFVKIARARLQKDFAVLLMRSSYQVVDDLDFVAMDDFQKQFFLFRQGEWSDYKENF-PRRIKQGDLQDPDYFDFISFAQYASIAEAMRNGRDFFEEKVGAAGDRRTVQRDADFKDNARLPEEHAKRVGDKILAYCTETFAATKLSPT-----VTQGLSLSELREGVDRIMNILRLNFY--QLDYAVTVDLD--RRLLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGLGGSTYSTAFSNFDAV-HTFRL*P 906
            L +  +  R P  VKI R R+ +DFAV +MR SY V D+LDFV M+DFQK FFL+RQ EW  Y+E   P  I QGDL D +YFDFISFAQY ++   M +G+  F EK GA G+ + V+R A   DN+ LP EH++RVGD++L +  + F   +   T          S S +   V +I N++ +  Y  + +  +T + D  +    +  ++PAT+WGQQVL+ R     ND+EAK  +AY + CG   +TY T+F    +V HTF + P
Sbjct:   54 LKQAADELRSPAPVKIPRTRINQDFAVQMMRQSYNVADELDFVPMNDFQKDFFLYRQNEWERYRERLKPMPITQGDLADANYFDFISFAQYLTLYTEMCSGQQLFVEKTGATGEEQLVRRPAFLADNSLLPSEHSRRVGDRLLDFLIDRFNTDESGKTCCIIRAAARPSPSFVVSNVQQIANLMTILGYAEKGEAKLTGERDDGKFSFEMMLVLPATLWGQQVLSIRGAGLPNDYEAKIAMAYTRRCGYR-ATYRTSFEGGSSVVHTFLVEP 324          
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Match: A0A4D9D7Y6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7Y6_9STRA)

HSP 1 Score: 187 bits (474), Expect = 3.810e-51
Identity = 118/291 (40.55%), Postives = 159/291 (54.64%), Query Frame = 1
Query:   91 MGVEKEG--YVTWLSRKVERARRPPFVKIARARLQKDFAVLLMRSSYQVVDDLDFVAMDDFQKQFFLFRQGEWSDYKENFPR-RIKQGDLQDPDYFDFISFAQYASIAEAMRNGRDFFEEKVGAAGDRRTVQRDADF---KDNARLPEEHAKRVGDKILAYCTET--FAATKLSPTVTQG---LSLSELREGVDRIMNILRLNFYQLDYAVTVDLDRR------------LLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGLGGSTYSTAFSNFDAVHTF 894
            +  E+ G  Y  WL R+ E   RP   +  R ++++D AVLLMRSSY+V D+LDFV M+DFQK FF FRQ EW DY   FP   ++QG+L  P YFDFISFAQY ++ E MR+G+  F E V A G++R V+R  D    +DN+ LP EH++RVGD+IL    E     A +LS     G   + + E+ E V RI+++     +     V    ++              L V +  PA +W  Q L  R +   NDFE KAV AYL+  G    TY+      D VHTF
Sbjct:   17 LSAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGRGGGGDIGVEEVVEDVKRIVDLFTAKQFNQGGEVKTLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEETYAVQVQGNDVVHTF 307          
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Match: A0A0M0K8A7_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8A7_9EUKA)

HSP 1 Score: 194 bits (494), Expect = 1.450e-50
Identity = 117/258 (45.35%), Postives = 150/258 (58.14%), Query Frame = 1
Query:   82 GITMGVEKEGYVTWLSRK-VERARRPPFVKIARARLQKDFAVLLMRSSYQVVDDLDFVAMDDFQKQFFLFRQGEWSDYKENFPRRIKQGDLQDPDYFDFISFAQYASIAEAMRNGRDFFEEKVGAAGDRRTVQRDADFKD-NARLPEEHAKRVGDKILAYCTETFAATK---LSPTVTQGLSLSELREGVDRIMNILRLNFYQLDYAVTVDLDRRLLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGL 840
            G+T  V+ +  V   +R+ +E + RP    + R RL++DFAVLLMR+SY V D+LDF+ MD+FQK+ FLFRQ EW  Y+E  P  + QGDL DP YFDFISF QYASIA  MR GR  FEE + A G    V R       N  LPE H+ RVGD++L +  E +       + PT +       L EG  R+ +I  LN + L   VT       +    + PAT+WG QVL  R D P NDFE  AVLAYL+ CG+
Sbjct:  419 GMTRAVQIDVRVGSRAREMIEASMRPKIRALPRRRLEQDFAVLLMRTSYAVADELDFMPMDEFQKEQFLFRQREWDTYREKLP--VMQGDLTDPAYFDFISFCQYASIASGMRRGRMIFEELIDANGTSVIVSRAPTLPQRNELLPEAHSIRVGDRLLNWMLERYDGVLRPVIPPTSSALPRAPVLVEGCQRVADIFTLNEFALTSTVTPLASGAGVAWTLVAPATLWGAQVLQLRGDEPKNDFEVMAVLAYLRRCGV 674          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJT5_9PHAE7.290e-15875.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI96_ECTSI4.110e-12271.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM91_9STRA1.250e-8856.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V3L1_9STRA1.590e-6244.40Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
R1CRK3_EMIHU4.900e-5344.96Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S0ETJ5_9EUKA5.600e-5342.69Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
R1DSH8_EMIHU2.740e-5245.63Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A0G4F5D5_VITBC7.480e-5241.54Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A4D9D7Y6_9STRA3.810e-5140.55Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A0M0K8A7_9EUKA1.450e-5045.35Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:2925463..2929766 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.8
Seed ortholog evalue1.1e-99
Seed eggNOG ortholog2880.D8LI96
EggNOG free text desc.tRNA (guanine-N7-)-methyltransferase activity
EggNOG OGs2S59I@2759,COG0220@1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_003680.1
Exons5
Model size1656
Cds size813
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817345.718595-UTR-P-fluviatile_contig9:2925462..29262151622817345.718595-UTR-P-fluviatile_contig9:2925462..2926215Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 2925463..2926215 -
1693572167.0789707-UTR-P-fluviatile_contig9:2925462..29262151693572167.0789707-UTR-P-fluviatile_contig9:2925462..2926215Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 2925463..2926215 -
1622817345.7848005-UTR-P-fluviatile_contig9:2929676..29297661622817345.7848005-UTR-P-fluviatile_contig9:2929676..2929766Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 2929677..2929766 -
1693572167.156633-UTR-P-fluviatile_contig9:2929676..29297661693572167.156633-UTR-P-fluviatile_contig9:2929676..2929766Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 2929677..2929766 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817345.729743-CDS-P-fluviatile_contig9:2926215..29263981622817345.729743-CDS-P-fluviatile_contig9:2926215..2926398Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2926216..2926398 -
1693572167.0961132-CDS-P-fluviatile_contig9:2926215..29263981693572167.0961132-CDS-P-fluviatile_contig9:2926215..2926398Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2926216..2926398 -
1622817345.7403047-CDS-P-fluviatile_contig9:2926750..29269211622817345.7403047-CDS-P-fluviatile_contig9:2926750..2926921Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2926751..2926921 -
1693572167.1144426-CDS-P-fluviatile_contig9:2926750..29269211693572167.1144426-CDS-P-fluviatile_contig9:2926750..2926921Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2926751..2926921 -
1622817345.750542-CDS-P-fluviatile_contig9:2927316..29275331622817345.750542-CDS-P-fluviatile_contig9:2927316..2927533Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2927317..2927533 -
1693572167.1288488-CDS-P-fluviatile_contig9:2927316..29275331693572167.1288488-CDS-P-fluviatile_contig9:2927316..2927533Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2927317..2927533 -
1622817345.7606528-CDS-P-fluviatile_contig9:2928397..29285011622817345.7606528-CDS-P-fluviatile_contig9:2928397..2928501Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2928398..2928501 -
1693572167.137671-CDS-P-fluviatile_contig9:2928397..29285011693572167.137671-CDS-P-fluviatile_contig9:2928397..2928501Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2928398..2928501 -
1622817345.7723322-CDS-P-fluviatile_contig9:2929538..29296761622817345.7723322-CDS-P-fluviatile_contig9:2929538..2929676Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2929539..2929676 -
1693572167.147051-CDS-P-fluviatile_contig9:2929538..29296761693572167.147051-CDS-P-fluviatile_contig9:2929538..2929676Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2929539..2929676 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15323.1prot_P-fluviatile_contig9.15323.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 2926216..2929676 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15323.1

>prot_P-fluviatile_contig9.15323.1 ID=prot_P-fluviatile_contig9.15323.1|Name=mRNA_P-fluviatile_contig9.15323.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=271bp
MGVEKEGYVTWLSRKVERARRPPFVKIARARLQKDFAVLLMRSSYQVVDD
LDFVAMDDFQKQFFLFRQGEWSDYKENFPRRIKQGDLQDPDYFDFISFAQ
YASIAEAMRNGRDFFEEKVGAAGDRRTVQRDADFKDNARLPEEHAKRVGD
KILAYCTETFAATKLSPTVTQGLSLSELREGVDRIMNILRLNFYQLDYAV
TVDLDRRLLTVKAIVPATIWGQQVLAQRRDRPTNDFEAKAVLAYLKACGL
GGSTYSTAFSNFDAVHTFRL*
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mRNA from alignment at P-fluviatile_contig9:2925463..2929766-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15323.1 ID=mRNA_P-fluviatile_contig9.15323.1|Name=mRNA_P-fluviatile_contig9.15323.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4304bp|location=Sequence derived from alignment at P-fluviatile_contig9:2925463..2929766- (Porterinema fluviatile SAG_2381)
TGTAGACTTATAGCGCTTGAAGCACTCGCCAATGGGTTCTTAACCCCATT GCGGAGCTTTAGTACTAGCAGTCATGGCGTTGGGATCACGATGGGGGTCG AGAAAGAAGGATACGTGACATGGCTGAGTAGGAAGGTGGAGCGGGCGCGA CGGCCACCATTCGTGAAAATTGCACGAGCACGGCTGCAGAAGGACTTCGC TGTGCTTCTTATGCGGTCAAGCTACCAGGTGCGCTCTGGAGAACGCGTCC ATTTGCTGTTGCTGTTTCGGTGGGATATTCTTCGGAGACAGCCCTTCATG TGTTCATGTGTCAGAGTCCCTGGGTAACGCCGCCTATCATGTTCTCATTG GAGTATTTTTTGAAGAGATTCTCTCTCTCGCTCGCTCTCGCTCTCTCTTC CCCCCCCCCTCTCTTCCCCCCTCCCCCCTCGCTCTCTTTCTCTTTCGCTC TACTCTCTTGTGACACGCTCGGGTACAAAATATTCAAGCAGGGCTATTCA CGCAACAGAACAACCTCGTGCAAGCGGGAAATTCAGTGTTCATGAGTTAT GGTCTCCGGTTCCTCATTCAACAAAACATAACCGCAGGGCTGGTGCTATT TGAAGAAACCGACAGCGGAAATCCAAATTCGAGCATCATTGTAAGAAGTT TGTAAGTAGCTTCTGCAGGGTACGCGCCGAGCCGCATTCATTTGGGGTAT TGACCCAAGGGTATTCTTTCTCGCCGTGGACTTCCGTGAGTTCGGTTGGA TTTCAAGACCTTTACCATCACGATTCAAAACCCTTCTCGAAATGCTCAAA CCCTTTAGAAACAAAGCGCTTGAAAAAATGTCGCATGTTTGATAATTAGT TGCATGCTTATAATTTCATTTTTGAGCAGCTCCGCATTTGTTTTTCTCCA CGAGACGGCACACACACCCGCTCGCCACTCACGACCAAGATCAGATCGCT CGCACGTCAGGCTGTCCAATGCAAGTTGATGCTGTTAAAGAACTGCATAC ACACCCGTGCGACTCTACGACAACCCGGAACCGTTAGAAACTTGAGAAGA TCCCTCGGATTCTGACGCGCAAGGGAGGGGCGCAAGTTAGGATACGAGGA CCGTCCCCCGCTAAGAGTCACAATGGCAGAAGCTCGCAAAGGAACGCGAT TCTGAACGAACAACTCTGGCCTTGATTGCGTAGCGTTCAACACCATGTAT CGATCCCGCGGCCTTCTCTCTCGTCCCTCGCTCCCTCCTTTCGTCTTCAC CCCCAAAACGTGTAGGTCGTTGACGACCTTGACTTCGTGGCCATGGACGA CTTCCAAAAGCAGTTCTTTCTTTTTCGACAAGGCGAGTGGTCGGACTACA AGGAGAATTTTCCCAGAAGGTGGGCGAGAACAAGTGCTGGCACGCAGAAA CCTTTTCAACGTACTCTTTTGAGTTTTTCCGAGGATGCAGGAGCCTTACA AGCGAGTCTGCCTTGCGATGTTTGGAAACTTTGGGCCGCATCAGGCCGAG ACAGAGTCGAATACGGTGTGCGAAAACAGGACTGCGGAAGGAAATGTAAA ACAGGGCCTAAATGGTCGCCAACTTTTTAATGATCTTTCCCATTTCTGCA AGCGTTTGCAACCTTAAACATGGAGTGTGTTTTCTACAAATTTAATCCTG TTTTTTCGATTTGATCAAACTTGTAGCATAGGCAAATAAAGCTCCTCAAC ACGTGAGTGTTACAGAGAAGGCTTGGCACGGGATGATCTGAACCGATGTG TACCGTATAACAAGCGCAAAGAGAGCCGCCCGCCATCAACAACACTTGGA GCCATGGACCAGAAACACTTACCAGTATTTGATGAATACATGCATGATCG TGCAGATTCCACCCGACCCTCAAATCGTAAAGATTCTCCCCTACACACTT CGTAGATCCCGCCCCCCCTGGCGCTTGGTAGAATGCAGCTCAAAATTCTC GTGATTCACGGAATGCCGTGCGATGCTTCGCATATTTTGCTACTCTTTCC TGTTTGGCCCGCCCGGCGAAATTCCGATGTTGTATGTCGAGGTCTCGTAC TCCGTACGAGGTCTATGTCGGAATGGCATGCATGGTCACGAGGCCCCCCG CCTTTCCCCTCCTGCCCCTCCCCCGCTCTCATTCGCCTCCATGATCGCGC GTGCTTAATCTGTTCACTCTCCGCTACCGTCGGTAGTTTCTCTACTAATG CTCCCCTTCATTAACCCAAAACCGCGAAATCAGAATAAAACAGGGCGACC TGCAGGATCCGGACTATTTCGACTTCATAAGCTTCGCGCAGTACGCAAGC ATCGCGGAGGCGATGCGAAACGGGAGGGATTTTTTTGAAGAAAAGGTCGG GGCAGCGGGCGACAGAAGGACGGTTCAAAGGGACGCTGACTTTAAGGATA ACGCTCGGTTACCAGAGGAACACGCCAAGAGGGTGGGTGACAAGATTTTG GTGAGTGAGAGAGGGTAGAAGGCGGCGGAGGGGGTGGGAAGGAGATCGGG ACCGTCGCTCGAATCGTGAAGGCGAATCGCATCCAAGCGAGGGCGGACTC ATGTCTTATCAGTGCTTGACTGCAGTAGCTATACATTTCCACCCTTCTTG TTTCAAGCACCTTCGCTTGGGGTGGCCTATCCGTTCAGCTGACCTCGAGC TCTCCTTCGACAAGTGTAAAAAAATTCAGTTGCCAGCAACTGTTAAATAA TGAAATCAATGGTATAGCCAGACGTTCTCGCTTTGTCAGGTTTGAAAGTA CGGCACCCACGCCGTCTGAAGCCTAGTCGTTCCTAGCAACAACGAGTCAC AACATCTGTTATTCTATTCCGCATGCGAACCCCGCCCGCGAACAGGCCTA CTGTACAGAAACTTTCGCGGCGACCAAGCTCAGTCCAACAGTGACTCAGG GACTCTCTCTGTCCGAGTTGCGGGAAGGAGTAGACCGAATCATGAACATA CTGCGGCTGAATTTTTACCAGCTGGACTACGCGGTGACGGTGGATCTGGA TCGCAGGTTGCTCACCGTGAGTGGCACGGGGTGGGATGGGGTGAAGGATG CCGTTCAGGTCGTCGATGGAATCTTGAGAGATGCGTCCATTGTTCTTCAC GCTGCGGAGACTGGACGCTTTTTGCGGCACATGAGATATCTTCTTTGGTT GCGGGTGGAGTAATCGATGGATCATGGCATATAATTGCCAGAGCGTGCGC AAGGATCCATGACTATCAAGCACCCCAGAGTTTGTTTGCGCTTGCGGCCG AATCTCGGGATGCGCTTCGACATCGTTGATCTGCGAGTGACATGTTTAAG AGTAGAGAAGGACAAAAGAAGCGTCACCTTGGGCTCACCATGACTCGCCC TTGCGTGAAACCGGGCAGGTCAAGGCCATCGTGCCGGCCACCATTTGGGG GCAGCAGGTGCTGGCGCAGAGGCGAGATCGACCCACCAACGATTTCGAGG CGAAGGCTGTTCTCGCGTACCTCAAAGCCTGCGGACTCGGGGGTTCAACC TACTCGACGGCATTCAGCAACTTCGACGCCGTTCACACCTTCCGGTTGTG ACCGAACGGCTTGCTCTGGTTTGACCGAGCCGCACACGCACTATTACGGT CGTACTTGCGTCGTTTCCCAAACTATGGGGTTGCTTGGGAAGGGTTCGAA GTTCTTGAGAGCTCGGTGACCCATTATTTTTTTCCGTTGGAACATCATGA AGTAAATCTTCTGTCCGCATGATTTGAGTGGTCGGAAGTTTTCGCACGCT GGACAGGTCGCAAATCGAATGATCTGTCGGCTATATCGAGCGCTGACAAA TGTTTTAAGATCATTCCACGGGAAAAAAAATTAGATCCATCTTCGGTGTG TGATCTGTCCGATTTGTGAAATTTTTGCACCCAACCATGAGCGGCAACTG GGGAATAATCTAGCACAAGTCGTTCGTTCCACGCCTGGTGCCATCGCGTG TTGTTGAAGACCGCTCCTCGCTTCCGCGGCGGAACACCACCGCTAAATTC TTCGACGACGGGGACGGCACTCGAGCTGCAATGGGCCCCTGGTCCCACCA AGCGACCAGAGGAAAGAAGGGATCCTCGATTTGCCAACACTGGTTTAGAG TTGGCGCTACGTTTTCCTCGTGCGTACACGGTTGGGCGGCACTGTGGTGT TCGCGATCACCAGGGGGCTGCACAGGGCTTCCGGATTTAGTGCGGCTGCT GTGTGCAACACCCGTCTTTGCCTTTAGGATTGAACGGTTCGGCGGACTAC GCTAGCGCACGCGGATGCGCCAATATGAGGAGCATGCGATGTTGACGATG CCGT
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Coding sequence (CDS) from alignment at P-fluviatile_contig9:2925463..2929766-

>mRNA_P-fluviatile_contig9.15323.1 ID=mRNA_P-fluviatile_contig9.15323.1|Name=mRNA_P-fluviatile_contig9.15323.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1626bp|location=Sequence derived from alignment at P-fluviatile_contig9:2925463..2929766- (Porterinema fluviatile SAG_2381)
ATGGGGGTCGAGAAAGAAGGATACGTGACATGGCTGAGTAGGAAGGTGGA
GCGGGCGCGACGGCCACCATTCGTGAAAATTGCACGAGCACGGCTGCAGA
AGGACTTCGCTGTGCTTCTTATGCGGTCAAGCTACCAGATGGGGGTCGAG
AAAGAAGGATACGTGACATGGCTGAGTAGGAAGGTGGAGCGGGCGCGACG
GCCACCATTCGTGAAAATTGCACGAGCACGGCTGCAGAAGGACTTCGCTG
TGCTTCTTATGCGGTCAAGCTACCAGGTCGTTGACGACCTTGACTTCGTG
GCCATGGACGACTTCCAAAAGCAGTTCTTTCTTTTTCGACAAGGCGAGTG
GTCGGACTACAAGGAGAATTTTCCCAGAAGGTCGTTGACGACCTTGACTT
CGTGGCCATGGACGACTTCCAAAAGCAGTTCTTTCTTTTTCGACAAGGCG
AGTGGTCGGACTACAAGGAGAATTTTCCCAGAAGAATAAAACAGGGCGAC
CTGCAGGATCCGGACTATTTCGACTTCATAAGCTTCGCGCAGTACGCAAG
CATCGCGGAGGCGATGCGAAACGGGAGGGATTTTTTTGAAGAAAAGGTCG
GGGCAGCGGGCGACAGAAGGACGGTTCAAAGGGACGCTGACTTTAAGGAT
AACGCTCGGTTACCAGAGGAACACGCCAAGAGGGTGGGTGACAAGATTTT
GAATAAAACAGGGCGACCTGCAGGATCCGGACTATTTCGACTTCATAAGC
TTCGCGCAGTACGCAAGCATCGCGGAGGCGATGCGAAACGGGAGGGATTT
TTTTGAAGAAAAGGTCGGGGCAGCGGGCGACAGAAGGACGGTTCAAAGGG
ACGCTGACTTTAAGGATAACGCTCGGTTACCAGAGGAACACGCCAAGAGG
GTGGGTGACAAGATTTTGGCCTACTGTACAGAAACTTTCGCGGCGACCAA
GCTCAGTCCAACAGTGACTCAGGGACTCTCTCTGTCCGAGTTGCGGGAAG
GAGTAGACCGAATCATGAACATACTGCGGCTGAATTTTTACCAGCTGGAC
TACGCGGTGACGGTGGATCTGGATCGCAGGTTGCTCACCGCCTACTGTAC
AGAAACTTTCGCGGCGACCAAGCTCAGTCCAACAGTGACTCAGGGACTCT
CTCTGTCCGAGTTGCGGGAAGGAGTAGACCGAATCATGAACATACTGCGG
CTGAATTTTTACCAGCTGGACTACGCGGTGACGGTGGATCTGGATCGCAG
GTTGCTCACCGTCAAGGCCATCGTGCCGGCCACCATTTGGGGGCAGCAGG
TGCTGGCGCAGAGGCGAGATCGACCCACCAACGATTTCGAGGCGAAGGCT
GTTCTCGCGTACCTCAAAGCCTGCGGACTCGGGGGTTCAACCTACTCGAC
GGCATTCAGCAACTTCGACGCCGTTCACACCTTCCGGTTGTGAGTCAAGG
CCATCGTGCCGGCCACCATTTGGGGGCAGCAGGTGCTGGCGCAGAGGCGA
GATCGACCCACCAACGATTTCGAGGCGAAGGCTGTTCTCGCGTACCTCAA
AGCCTGCGGACTCGGGGGTTCAACCTACTCGACGGCATTCAGCAACTTCG
ACGCCGTTCACACCTTCCGGTTGTGA
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